RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 DEFB104AQ8WTQ1 72 aa8.54□□□□□ -1.04
SEMA4D-209ENST00000429836 LRBAP50851 2863 aa8.53□□□□□ -1.04
SEMA4D-209ENST00000429836 MED13LQ71F56 2210 aa8.53□□□□□ -1.04
SEMA4D-209ENST00000429836 EMP1P54849 157 aa8.53□□□□□ -1.04
SEMA4D-209ENST00000429836 C3orf36Q3SXR2 165 aa8.53□□□□□ -1.04
SEMA4D-209ENST00000429836 CITED1Q99966 193 aa8.53□□□□□ -1.04
SEMA4D-209ENST00000429836 CRLF1O75462 422 aa8.53□□□□□ -1.04
SEMA4D-209ENST00000429836 SCGB1C2P0DMR2 95 aa8.53□□□□□ -1.04
SEMA4D-209ENST00000429836 RPL7P18124 248 aaKnown RBP8.53□□□□□ -1.04
SEMA4D-209ENST00000429836 NDUFA11Q86Y39 141 aa8.53□□□□□ -1.04
SEMA4D-209ENST00000429836 TMEM190Q8WZ59 177 aa8.53□□□□□ -1.04
SEMA4D-209ENST00000429836 ONECUT1Q9UBC0 465 aa8.53□□□□□ -1.04
SEMA4D-209ENST00000429836 TRAV12-1A0A0B4J245 112 aa8.52□□□□□ -1.04
SEMA4D-209ENST00000429836 TRAV4A0A0B4J268 109 aa8.52□□□□□ -1.04
SEMA4D-209ENST00000429836 F8W735 103 aaPredicted RBP8.52□□□□□ -1.04
SEMA4D-209ENST00000429836 BUB1B-PAK6H3BSN5 160 aa8.52□□□□□ -1.04
SEMA4D-209ENST00000429836 NEXN-AS1Q8NBZ9 246 aa8.52□□□□□ -1.04
SEMA4D-209ENST00000429836 OR11H6Q8NGC7 330 aa8.52□□□□□ -1.04
SEMA4D-209ENST00000429836 RASL10AQ92737 203 aa8.52□□□□□ -1.04
SEMA4D-209ENST00000429836 IGLV1-47P01700 117 aa8.52□□□□□ -1.05
SEMA4D-209ENST00000429836 CRIP2P52943 208 aaPredicted RBP8.52□□□□□ -1.05
SEMA4D-209ENST00000429836 TRAV8-2A0A0B4J237 113 aa8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 IGHV3-66A0A0C4DH42 116 aa8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 ADIPOQQ15848 244 aa8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 SPANXN1Q5VSR9 72 aa8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 Q6ZS46 218 aa8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 SMIM2Q9BVW6 85 aa8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 BAALCQ8WXS3 180 aa8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 FANCD2OSQ96PS1 177 aa8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 ABCA4P78363 2273 aa8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 CACNA1BQ00975 2339 aa8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 IGHV3OR16-13A0A075B7E8 117 aa8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 IGHV3-74A0A0B4J1X5 117 aa8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 IGHV7-4-1A0A0J9YVY3 117 aa8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 MBD3L4A6NDZ8 208 aaPredicted RBP8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 MBD3L3A6NE82 208 aaPredicted RBP8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 MBD3L5A6NJ08 208 aaPredicted RBP8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 CFC1BP0CG36 223 aa8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 CFC1P0CG37 223 aa8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 COX6B1P14854 86 aa8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 MFAP4P55083 255 aa8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 NDUFV3P56181 108 aaKnown RBP8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 RPL32P62910 135 aaKnown RBP8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 SRSF2Q01130 221 aaKnown RBP8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 TRPT1Q86TN4 253 aaKnown RBP8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 MBD3L2Q8NHZ7 208 aaPredicted RBP8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 RAB1BQ9H0U4 201 aa8.51□□□□□ -1.05
SEMA4D-209ENST00000429836 C9JAW5 83 aa8.5□□□□□ -1.05
SEMA4D-209ENST00000429836 RHODO00212 210 aa8.5□□□□□ -1.05
SEMA4D-209ENST00000429836 TIMM23O14925 209 aa8.5□□□□□ -1.05
SEMA4D-209ENST00000429836 TCF15Q12870 199 aa8.5□□□□□ -1.05
SEMA4D-209ENST00000429836 GAGE2BQ13066 116 aa8.5□□□□□ -1.05
SEMA4D-209ENST00000429836 GAGE2EQ4V326 116 aa8.5□□□□□ -1.05
SEMA4D-209ENST00000429836 SBSPONQ8IVN8 264 aa8.5□□□□□ -1.05
SEMA4D-209ENST00000429836 RPL39LQ96EH5 51 aaKnown RBP8.5□□□□□ -1.05
SEMA4D-209ENST00000429836 RAX2Q96IS3 184 aa8.5□□□□□ -1.05
SEMA4D-209ENST00000429836 GAGE2DQ9UEU5 116 aa8.5□□□□□ -1.05
SEMA4D-209ENST00000429836 FAM215AQ9Y5M1 114 aa8.5□□□□□ -1.05
SEMA4D-209ENST00000429836 OTOGLQ3ZCN5 2332 aa8.5□□□□□ -1.05
SEMA4D-209ENST00000429836 H7C2G1 150 aa8.5□□□□□ -1.05
SEMA4D-209ENST00000429836 ZNF672Q499Z4 452 aaPredicted RBP8.5□□□□□ -1.05
SEMA4D-209ENST00000429836 ARHGAP32A7KAX9 2087 aa8.5□□□□□ -1.05
SEMA4D-209ENST00000429836 SLC25A20O43772 301 aa8.49□□□□□ -1.05
SEMA4D-209ENST00000429836 LYRM7Q5U5X0 104 aa8.49□□□□□ -1.05
SEMA4D-209ENST00000429836 TOMM6Q96B49 74 aa8.49□□□□□ -1.05
SEMA4D-209ENST00000429836 A0A0J9YY99 117 aa8.49□□□□□ -1.05
SEMA4D-209ENST00000429836 GAGE12JA6NER3 117 aa8.49□□□□□ -1.05
SEMA4D-209ENST00000429836 TMEM262E9PQX1 116 aa8.49□□□□□ -1.05
SEMA4D-209ENST00000429836 J3KRW8 73 aa8.49□□□□□ -1.05
SEMA4D-209ENST00000429836 SNCGO76070 127 aa8.49□□□□□ -1.05
SEMA4D-209ENST00000429836 GAGE7O76087 117 aa8.49□□□□□ -1.05
SEMA4D-209ENST00000429836 GAGE12FP0CL80 117 aa8.49□□□□□ -1.05
SEMA4D-209ENST00000429836 GAGE12GP0CL81 117 aa8.49□□□□□ -1.05
SEMA4D-209ENST00000429836 GAGE12IP0CL82 117 aa8.49□□□□□ -1.05
SEMA4D-209ENST00000429836 CD59P13987 128 aa8.49□□□□□ -1.05
SEMA4D-209ENST00000429836 SRD5A1P18405 259 aa8.49□□□□□ -1.05
SEMA4D-209ENST00000429836 GAGE4Q13068 117 aa8.49□□□□□ -1.05
SEMA4D-209ENST00000429836 C2orf66Q6UXQ4 117 aa8.49□□□□□ -1.05
SEMA4D-209ENST00000429836 AGPAT4-IT1Q9H0P7 198 aa8.49□□□□□ -1.05
SEMA4D-209ENST00000429836 VCX2Q9H322 139 aa8.49□□□□□ -1.05
SEMA4D-209ENST00000429836 C21orf62Q9NYP8 219 aa8.49□□□□□ -1.05
SEMA4D-209ENST00000429836 FAM110AQ9BQ89 295 aa8.48□□□□□ -1.05
SEMA4D-209ENST00000429836 APC2O95996 2303 aa8.48□□□□□ -1.05
SEMA4D-209ENST00000429836 TRAV17A0A0B4J275 112 aa8.48□□□□□ -1.05
SEMA4D-209ENST00000429836 CDX4O14627 284 aaPredicted RBP8.48□□□□□ -1.05
SEMA4D-209ENST00000429836 C1orf122Q6ZSJ8 110 aa8.48□□□□□ -1.05
SEMA4D-209ENST00000429836 COL12A1Q99715 3063 aa8.48□□□□□ -1.05
SEMA4D-209ENST00000429836 IGLV11-55A0A075B6I3 123 aa8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 IGHV3-49A0A0A0MS15 119 aa8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 C11orf86A6NJI1 115 aa8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 LYNX1G3V0Z9 82 aa8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 BRI3O95415 125 aa8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 LYNX1P0DP58 116 aa8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 TSPEAR-AS2P59090 65 aa8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 TTC32Q5I0X7 151 aa8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 C10orf126Q8N4M7 172 aa8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 MSRB2Q9Y3D2 182 aa8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 MAP1AP78559 2803 aaPredicted RBP8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 M0R381 172 aa8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 SUMO2P61956 95 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms