RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 CCL18P55774 89 aa12.51□□□□□ -0.41
SSR4P1-202ENST00000429427 FHL2Q14192 279 aa12.51□□□□□ -0.41
SSR4P1-202ENST00000429427 LINC00336Q6ZUF6 198 aa12.51□□□□□ -0.41
SSR4P1-202ENST00000429427 RASL10AQ92737 203 aa12.51□□□□□ -0.41
SSR4P1-202ENST00000429427 TRGV11A0A075B6L2 103 aa12.5□□□□□ -0.41
SSR4P1-202ENST00000429427 TRAV34A0A0B4J273 112 aa12.5□□□□□ -0.41
SSR4P1-202ENST00000429427 MAP1LC3B2A6NCE7 125 aa12.5□□□□□ -0.41
SSR4P1-202ENST00000429427 FLI1Q01543 452 aaPredicted RBP12.5□□□□□ -0.41
SSR4P1-202ENST00000429427 TMEM75Q8N9X5 138 aa12.5□□□□□ -0.41
SSR4P1-202ENST00000429427 ZNF479Q96JC4 524 aa12.5□□□□□ -0.41
SSR4P1-202ENST00000429427 KRTAP1-5Q9BYS1 174 aa12.5□□□□□ -0.41
SSR4P1-202ENST00000429427 MAP1LC3BQ9GZQ8 125 aa12.5□□□□□ -0.41
SSR4P1-202ENST00000429427 HERC2O95714 4834 aa12.5□□□□□ -0.41
SSR4P1-202ENST00000429427 NBDYA0A0U1RRE5 68 aa12.49□□□□□ -0.41
SSR4P1-202ENST00000429427 GCGP01275 180 aa12.49□□□□□ -0.41
SSR4P1-202ENST00000429427 SFTA3P0C7M3 94 aa12.49□□□□□ -0.41
SSR4P1-202ENST00000429427 PRNTQ86SH4 94 aa12.49□□□□□ -0.41
SSR4P1-202ENST00000429427 SPXQ9BT56 116 aa12.49□□□□□ -0.41
SSR4P1-202ENST00000429427 PRSS29PA6NIE9 313 aa12.48□□□□□ -0.41
SSR4P1-202ENST00000429427 BCL2L11O43521 198 aa12.48□□□□□ -0.41
SSR4P1-202ENST00000429427 CRYBA4P53673 196 aa12.48□□□□□ -0.41
SSR4P1-202ENST00000429427 NDFIP1Q9BT67 221 aa12.48□□□□□ -0.41
SSR4P1-202ENST00000429427 K7EQM0 130 aa12.47□□□□□ -0.41
SSR4P1-202ENST00000429427 PEX7O00628 323 aa12.47□□□□□ -0.41
SSR4P1-202ENST00000429427 PFN1P07737 140 aaKnown RBP12.47□□□□□ -0.41
SSR4P1-202ENST00000429427 UPK3BQ9BT76 320 aa12.47□□□□□ -0.41
SSR4P1-202ENST00000429427 ARL2-SNX15V9GYD0 113 aa12.47□□□□□ -0.41
SSR4P1-202ENST00000429427 A0A0D9SG52 128 aa12.46□□□□□ -0.41
SSR4P1-202ENST00000429427 PAX4O43316 350 aa12.46□□□□□ -0.41
SSR4P1-202ENST00000429427 SEC11BP0C7V7 166 aa12.46□□□□□ -0.41
SSR4P1-202ENST00000429427 Q86TA4 180 aa12.46□□□□□ -0.41
SSR4P1-202ENST00000429427 ZNF471Q9BX82 626 aaPredicted RBP12.46□□□□□ -0.41
SSR4P1-202ENST00000429427 Q9H8V8 135 aa12.46□□□□□ -0.41
SSR4P1-202ENST00000429427 SDF2L1Q9HCN8 221 aa12.46□□□□□ -0.41
SSR4P1-202ENST00000429427 PRO0255Q9UI72 69 aa12.46□□□□□ -0.41
SSR4P1-202ENST00000429427 HHLA3Q9XRX5 114 aa12.46□□□□□ -0.41
SSR4P1-202ENST00000429427 MRPS16Q9Y3D3 137 aaKnown RBP12.46□□□□□ -0.41
SSR4P1-202ENST00000429427 M0R2P5 195 aa12.45□□□□□ -0.42
SSR4P1-202ENST00000429427 IFNA7P01567 189 aa12.45□□□□□ -0.42
SSR4P1-202ENST00000429427 SMUG1Q53HV7 270 aa12.45□□□□□ -0.42
SSR4P1-202ENST00000429427 C1orf134Q5TEV5 83 aa12.45□□□□□ -0.42
SSR4P1-202ENST00000429427 KCNS1Q96KK3 526 aa12.45□□□□□ -0.42
SSR4P1-202ENST00000429427 DPPA3Q6W0C5 159 aa12.44□□□□□ -0.42
SSR4P1-202ENST00000429427 MBD3L1Q8WWY6 194 aa12.44□□□□□ -0.42
SSR4P1-202ENST00000429427 C9orf85Q96MD7 179 aa12.44□□□□□ -0.42
SSR4P1-202ENST00000429427 TRAV4A0A0B4J268 109 aa12.43□□□□□ -0.42
SSR4P1-202ENST00000429427 IGKV3D-20A0A0C4DH25 116 aa12.43□□□□□ -0.42
SSR4P1-202ENST00000429427 FBLL1A6NHQ2 334 aaKnown RBP12.43□□□□□ -0.42
SSR4P1-202ENST00000429427 RNASE3P12724 160 aaKnown RBP12.43□□□□□ -0.42
SSR4P1-202ENST00000429427 CRIP1P50238 77 aa12.43□□□□□ -0.42
SSR4P1-202ENST00000429427 SAPCD1Q5SSQ6 148 aa12.43□□□□□ -0.42
SSR4P1-202ENST00000429427 TMUB2Q71RG4 321 aa12.43□□□□□ -0.42
SSR4P1-202ENST00000429427 FAM213BQ8TBF2 198 aa12.43□□□□□ -0.42
SSR4P1-202ENST00000429427 HIST1H2BAQ96A08 127 aa12.43□□□□□ -0.42
SSR4P1-202ENST00000429427 NKX6-2Q9C056 277 aaPredicted RBP12.43□□□□□ -0.42
SSR4P1-202ENST00000429427 ICOSQ9Y6W8 199 aa12.43□□□□□ -0.42
SSR4P1-202ENST00000429427 TRGV4A0A0C4DH28 118 aa12.42□□□□□ -0.42
SSR4P1-202ENST00000429427 KANTRA0A1W2PQU2 76 aa12.42□□□□□ -0.42
SSR4P1-202ENST00000429427 ZFP69Q49AA0 526 aa12.42□□□□□ -0.42
SSR4P1-202ENST00000429427 ZNF575Q86XF7 245 aa12.42□□□□□ -0.42
SSR4P1-202ENST00000429427 ZC2HC1AQ96GY0 325 aa12.42□□□□□ -0.42
SSR4P1-202ENST00000429427 A0A1B0GV50 99 aa12.41□□□□□ -0.42
SSR4P1-202ENST00000429427 UMAD1C9J7I0 102 aa12.41□□□□□ -0.42
SSR4P1-202ENST00000429427 K7EQD1 137 aa12.41□□□□□ -0.42
SSR4P1-202ENST00000429427 PAGE4O60829 102 aa12.41□□□□□ -0.42
SSR4P1-202ENST00000429427 SLAQ13239 276 aa12.41□□□□□ -0.42
SSR4P1-202ENST00000429427 Q6ZNX1 250 aa12.41□□□□□ -0.42
SSR4P1-202ENST00000429427 COX8CQ7Z4L0 72 aa12.41□□□□□ -0.42
SSR4P1-202ENST00000429427 SFT2D1Q8WV19 159 aa12.41□□□□□ -0.42
SSR4P1-202ENST00000429427 LOC100131303A0A0U1RQF7 123 aa12.4□□□□□ -0.42
SSR4P1-202ENST00000429427 C9JCJ5 164 aa12.4□□□□□ -0.42
SSR4P1-202ENST00000429427 PPT1P50897 306 aa12.4□□□□□ -0.42
SSR4P1-202ENST00000429427 TNP2Q05952 138 aa12.4□□□□□ -0.42
SSR4P1-202ENST00000429427 LGALSLQ3ZCW2 172 aaPredicted RBP12.4□□□□□ -0.42
SSR4P1-202ENST00000429427 CST9LP1Q5W188 147 aa12.4□□□□□ -0.42
SSR4P1-202ENST00000429427 TCTE3Q8IZS6 198 aa12.4□□□□□ -0.42
SSR4P1-202ENST00000429427 C6orf223Q8N319 242 aa12.4□□□□□ -0.42
SSR4P1-202ENST00000429427 OR4C5Q8NGB2 326 aa12.4□□□□□ -0.42
SSR4P1-202ENST00000429427 STOML3Q8TAV4 291 aa12.4□□□□□ -0.42
SSR4P1-202ENST00000429427 PGPEP1LA6NFU8 196 aa12.39□□□□□ -0.43
SSR4P1-202ENST00000429427 ZNF876PQ49A33 203 aa12.39□□□□□ -0.43
SSR4P1-202ENST00000429427 ZNF506Q5JVG8 444 aa12.39□□□□□ -0.43
SSR4P1-202ENST00000429427 CFAP126Q5VTH2 177 aa12.39□□□□□ -0.43
SSR4P1-202ENST00000429427 LYPD5Q6UWN5 251 aa12.39□□□□□ -0.43
SSR4P1-202ENST00000429427 RS1O15537 224 aa12.38□□□□□ -0.43
SSR4P1-202ENST00000429427 PFDN1O60925 122 aa12.38□□□□□ -0.43
SSR4P1-202ENST00000429427 LTAP01374 205 aa12.38□□□□□ -0.43
SSR4P1-202ENST00000429427 GYPEP15421 78 aa12.38□□□□□ -0.43
SSR4P1-202ENST00000429427 GATA1P15976 413 aaPredicted RBP12.38□□□□□ -0.43
SSR4P1-202ENST00000429427 MRPL23Q16540 153 aaKnown RBP12.38□□□□□ -0.43
SSR4P1-202ENST00000429427 SOHLH1Q5JUK2 328 aa12.38□□□□□ -0.43
SSR4P1-202ENST00000429427 FMC1Q96HJ9 113 aa12.38□□□□□ -0.43
SSR4P1-202ENST00000429427 TRBV6-1A0A0K0K1D8 114 aa12.37□□□□□ -0.43
SSR4P1-202ENST00000429427 FABP5P3A8MUU1 101 aa12.37□□□□□ -0.43
SSR4P1-202ENST00000429427 NXPH4O95158 308 aa12.37□□□□□ -0.43
SSR4P1-202ENST00000429427 TPT1P13693 172 aaKnown RBP12.37□□□□□ -0.43
SSR4P1-202ENST00000429427 CCL20P78556 96 aa12.37□□□□□ -0.43
SSR4P1-202ENST00000429427 PTH2Q96A98 100 aa12.37□□□□□ -0.43
SSR4P1-202ENST00000429427 TCEAL7Q9BRU2 100 aa12.37□□□□□ -0.43
SSR4P1-202ENST00000429427 SCO2A0A1W2PP80 73 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms