RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 NPYP01303 97 aa6.31□□□□□ -1.4
HPS4-205ENST00000429411 EGR2P11161 476 aaPredicted RBP6.31□□□□□ -1.4
HPS4-205ENST00000429411 C1RLQ9NZP8 487 aa6.31□□□□□ -1.4
HPS4-205ENST00000429411 V9GYY9 64 aa6.31□□□□□ -1.4
HPS4-205ENST00000429411 TRAV26-2A0A0B4J265 109 aa6.31□□□□□ -1.4
HPS4-205ENST00000429411 MRPL51Q4U2R6 128 aaKnown RBP6.31□□□□□ -1.4
HPS4-205ENST00000429411 BRD3OSQ6XYD6 125 aa6.31□□□□□ -1.4
HPS4-205ENST00000429411 PPDPFQ9H3Y8 114 aa6.31□□□□□ -1.4
HPS4-205ENST00000429411 CYSRT1A8MQ03 144 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 HAX1O00165 279 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 IGKV3-20P01619 116 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 HBDP02042 147 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 MYCNOSP40205 109 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 TMEM97Q5BJF2 176 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 OR1N2Q8NGR9 330 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 NEU4Q8WWR8 484 aaPredicted RBP6.3□□□□□ -1.4
HPS4-205ENST00000429411 PRSS22Q9GZN4 317 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 B5MCH6 92 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 CRIP1P50238 77 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 BVES-AS1Q5T3Y7 98 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 SFTA2Q6UW10 78 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 GTSCR1Q86UQ5 136 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 ZNF747Q9BV97 191 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 VPREB3Q9UKI3 123 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 FABP5P3A8MUU1 101 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 HTN1P15515 57 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 AZU1P20160 251 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 DEFB1P60022 68 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 IL17RELQ6ZVW7 336 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 DYNAPQ8N1N2 210 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 MAPK1IP1LQ8NDC0 245 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 PRR25Q96S07 402 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 GFRA4Q9GZZ7 299 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 C7orf69Q9H7B7 122 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 RETNQ9HD89 108 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 DKK2Q9UBU2 259 aa6.3□□□□□ -1.4
HPS4-205ENST00000429411 HIVEP1P15822 2718 aa6.29□□□□□ -1.4
HPS4-205ENST00000429411 A6NDN8 102 aa6.29□□□□□ -1.4
HPS4-205ENST00000429411 PRAC2D3DTV9 90 aa6.29□□□□□ -1.4
HPS4-205ENST00000429411 F5H697 171 aa6.29□□□□□ -1.4
HPS4-205ENST00000429411 FSTL3O95633 263 aa6.29□□□□□ -1.4
HPS4-205ENST00000429411 KRTAP10-9P60411 292 aa6.29□□□□□ -1.4
HPS4-205ENST00000429411 HIST1H1AQ02539 215 aaPredicted RBP6.29□□□□□ -1.4
HPS4-205ENST00000429411 FAM104BQ5XKR9 115 aa6.29□□□□□ -1.4
HPS4-205ENST00000429411 PCP2Q8IVA1 136 aa6.29□□□□□ -1.4
HPS4-205ENST00000429411 NBEAL1Q6ZS30 2694 aa6.29□□□□□ -1.4
HPS4-205ENST00000429411 COL6A5A8TX70 2615 aa6.29□□□□□ -1.4
HPS4-205ENST00000429411 H3BVH4 76 aa6.29□□□□□ -1.4
HPS4-205ENST00000429411 ATP6V0E1O15342 81 aa6.29□□□□□ -1.4
HPS4-205ENST00000429411 NDUFA3O95167 84 aa6.29□□□□□ -1.4
HPS4-205ENST00000429411 METTL26Q96S19 204 aa6.29□□□□□ -1.4
HPS4-205ENST00000429411 ZMAT4Q9H898 229 aa6.29□□□□□ -1.4
HPS4-205ENST00000429411 INS-IGF2F8WCM5 200 aa6.29□□□□□ -1.4
HPS4-205ENST00000429411 IGLV2-11P01706 119 aa6.29□□□□□ -1.4
HPS4-205ENST00000429411 ZNF80P51504 273 aaPredicted RBP6.29□□□□□ -1.4
HPS4-205ENST00000429411 MRGPRG-AS1Q2M3A8 158 aa6.29□□□□□ -1.4
HPS4-205ENST00000429411 LCNL1Q6ZST4 164 aa6.29□□□□□ -1.4
HPS4-205ENST00000429411 TMEM14CQ9P0S9 112 aa6.29□□□□□ -1.4
HPS4-205ENST00000429411 OR11H12B2RN74 326 aa6.28□□□□□ -1.4
HPS4-205ENST00000429411 PRTN3P24158 256 aa6.28□□□□□ -1.4
HPS4-205ENST00000429411 SAA4P35542 130 aa6.28□□□□□ -1.4
HPS4-205ENST00000429411 Q6AWC8 147 aa6.28□□□□□ -1.4
HPS4-205ENST00000429411 OR11H1Q8NG94 326 aa6.28□□□□□ -1.4
HPS4-205ENST00000429411 OR11H2Q8NH07 326 aa6.28□□□□□ -1.4
HPS4-205ENST00000429411 MYOZ3Q8TDC0 251 aa6.28□□□□□ -1.4
HPS4-205ENST00000429411 FAM231BA6NCW3 169 aa6.28□□□□□ -1.4
HPS4-205ENST00000429411 TRGV3P03979 118 aa6.28□□□□□ -1.4
HPS4-205ENST00000429411 FANCD2OSQ96PS1 177 aa6.28□□□□□ -1.4
HPS4-205ENST00000429411 BPESC1Q9GZL8 116 aa6.28□□□□□ -1.4
HPS4-205ENST00000429411 GAS8-AS1O95177 125 aa6.27□□□□□ -1.41
HPS4-205ENST00000429411 GTF2H5Q6ZYL4 71 aa6.27□□□□□ -1.41
HPS4-205ENST00000429411 TMEM158Q8WZ71 300 aa6.27□□□□□ -1.41
HPS4-205ENST00000429411 SIGMAR1Q99720 223 aa6.27□□□□□ -1.41
HPS4-205ENST00000429411 BEX4Q9NWD9 120 aaPredicted RBP6.27□□□□□ -1.41
HPS4-205ENST00000429411 NHP2Q9NX24 153 aaKnown RBP6.27□□□□□ -1.41
HPS4-205ENST00000429411 GAGE12BA1L429 117 aa6.27□□□□□ -1.41
HPS4-205ENST00000429411 SMIM9A6NGZ8 99 aa6.27□□□□□ -1.41
HPS4-205ENST00000429411 LINC01548A6NM66 108 aa6.27□□□□□ -1.41
HPS4-205ENST00000429411 CRYGBP07316 175 aa6.27□□□□□ -1.41
HPS4-205ENST00000429411 C8orf31Q8N9H6 132 aa6.27□□□□□ -1.41
HPS4-205ENST00000429411 TAX1BP3O14907 124 aa6.27□□□□□ -1.41
HPS4-205ENST00000429411 ZNF502Q8TBZ5 544 aa6.27□□□□□ -1.41
HPS4-205ENST00000429411 BAALCQ8WXS3 180 aa6.27□□□□□ -1.41
HPS4-205ENST00000429411 SVEP1Q4LDE5 3571 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 CTSGP08311 255 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 ZFP36P26651 326 aaKnown RBP6.26□□□□□ -1.41
HPS4-205ENST00000429411 FOXE3Q13461 319 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 KIR3DS1Q14943 382 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 ZC2HC1BQ5TFG8 222 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 RAX2Q96IS3 184 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 MS4A6AQ9H2W1 248 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 SPCS1Q9Y6A9 102 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 J3QLI3 93 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 COX8AP10176 69 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 GATA3P23771 443 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 EFNA4P52798 201 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 EMP1P54849 157 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 ATP5G2Q06055 141 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 FAM74A4Q5TZK3 123 aa6.26□□□□□ -1.41
HPS4-205ENST00000429411 LYPD1Q8N2G4 141 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms