RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 PYGO2Q9BRQ0 406 aa5.76□□□□□ -1.49
HMGA1P4-201ENST00000428643 RPP21Q9H633 154 aaKnown RBP5.76□□□□□ -1.49
HMGA1P4-201ENST00000428643 RETNQ9HD89 108 aa5.76□□□□□ -1.49
HMGA1P4-201ENST00000428643 TRGV11A0A075B6L2 103 aa5.75□□□□□ -1.49
HMGA1P4-201ENST00000428643 GRIFINA4D1Z8 144 aa5.75□□□□□ -1.49
HMGA1P4-201ENST00000428643 C19orf71A6NCJ1 209 aa5.75□□□□□ -1.49
HMGA1P4-201ENST00000428643 LCE2BO14633 110 aa5.75□□□□□ -1.49
HMGA1P4-201ENST00000428643 SPRY2O43597 315 aa5.75□□□□□ -1.49
HMGA1P4-201ENST00000428643 GATCO43716 136 aaKnown RBP5.75□□□□□ -1.49
HMGA1P4-201ENST00000428643 ZNF324O75467 553 aaPredicted RBP5.75□□□□□ -1.49
HMGA1P4-201ENST00000428643 SNAPINO95295 136 aa5.75□□□□□ -1.49
HMGA1P4-201ENST00000428643 MT-ND4LP03901 98 aa5.75□□□□□ -1.49
HMGA1P4-201ENST00000428643 ANXA2RQ3ZCQ2 193 aa5.75□□□□□ -1.49
HMGA1P4-201ENST00000428643 LINC01559Q495D7 138 aa5.75□□□□□ -1.49
HMGA1P4-201ENST00000428643 ZNF705AQ6ZN79 300 aaPredicted RBP5.75□□□□□ -1.49
HMGA1P4-201ENST00000428643 FAM231DQ6ZW35 169 aa5.75□□□□□ -1.49
HMGA1P4-201ENST00000428643 CSNK1G2-AS1Q8NCQ2 148 aa5.75□□□□□ -1.49
HMGA1P4-201ENST00000428643 CLRN3Q8NCR9 226 aa5.75□□□□□ -1.49
HMGA1P4-201ENST00000428643 NUDT10Q8NFP7 164 aa5.75□□□□□ -1.49
HMGA1P4-201ENST00000428643 NUDT11Q96G61 164 aa5.75□□□□□ -1.49
HMGA1P4-201ENST00000428643 KCNS1Q96KK3 526 aa5.75□□□□□ -1.49
HMGA1P4-201ENST00000428643 OSTCQ9NRP0 149 aa5.75□□□□□ -1.49
HMGA1P4-201ENST00000428643 C11orf21Q9P2W6 132 aa5.75□□□□□ -1.49
HMGA1P4-201ENST00000428643 TIMM8BQ9Y5J9 83 aaPredicted RBP5.75□□□□□ -1.49
HMGA1P4-201ENST00000428643 XKRY2A2RUG3 117 aa5.74□□□□□ -1.49
HMGA1P4-201ENST00000428643 PPP1R2P9O14990 202 aa5.74□□□□□ -1.49
HMGA1P4-201ENST00000428643 GZMBP10144 247 aa5.74□□□□□ -1.49
HMGA1P4-201ENST00000428643 S100A4P26447 101 aaKnown RBP5.74□□□□□ -1.49
HMGA1P4-201ENST00000428643 ASIPP42127 132 aa5.74□□□□□ -1.49
HMGA1P4-201ENST00000428643 TCL1AP56279 114 aa5.74□□□□□ -1.49
HMGA1P4-201ENST00000428643 RPS20P60866 119 aaKnown RBP5.74□□□□□ -1.49
HMGA1P4-201ENST00000428643 ZNF415Q09FC8 603 aa5.74□□□□□ -1.49
HMGA1P4-201ENST00000428643 RHEBQ15382 184 aa5.74□□□□□ -1.49
HMGA1P4-201ENST00000428643 RRN3P1Q2M238 152 aa5.74□□□□□ -1.49
HMGA1P4-201ENST00000428643 RNF212Q495C1 297 aa5.74□□□□□ -1.49
HMGA1P4-201ENST00000428643 SBSPONQ8IVN8 264 aa5.74□□□□□ -1.49
HMGA1P4-201ENST00000428643 OR11H2Q8NH07 326 aa5.74□□□□□ -1.49
HMGA1P4-201ENST00000428643 RNF183Q96D59 192 aa5.74□□□□□ -1.49
HMGA1P4-201ENST00000428643 SPATA25Q9BR10 227 aa5.74□□□□□ -1.49
HMGA1P4-201ENST00000428643 TPPP3Q9BW30 176 aa5.74□□□□□ -1.49
HMGA1P4-201ENST00000428643 PRKDCP78527 4128 aaKnown RBP5.73□□□□□ -1.49
HMGA1P4-201ENST00000428643 IGKV3D-20A0A0C4DH25 116 aa5.73□□□□□ -1.49
HMGA1P4-201ENST00000428643 C7orf77A4D0Y5 90 aa5.73□□□□□ -1.49
HMGA1P4-201ENST00000428643 H3BVH4 76 aa5.73□□□□□ -1.49
HMGA1P4-201ENST00000428643 PRM2P04554 102 aa5.73□□□□□ -1.49
HMGA1P4-201ENST00000428643 TYMSP04818 313 aa5.73□□□□□ -1.49
HMGA1P4-201ENST00000428643 EMP1P54849 157 aa5.73□□□□□ -1.49
HMGA1P4-201ENST00000428643 TDRG1Q3Y452 100 aa5.73□□□□□ -1.49
HMGA1P4-201ENST00000428643 CT83Q5H943 113 aa5.73□□□□□ -1.49
HMGA1P4-201ENST00000428643 OVOL2Q9BRP0 275 aa5.73□□□□□ -1.49
HMGA1P4-201ENST00000428643 LINC00467Q9BRT7 94 aa5.73□□□□□ -1.49
HMGA1P4-201ENST00000428643 RPS10P5Q9NQ39 176 aa5.73□□□□□ -1.49
HMGA1P4-201ENST00000428643 TP53TG3Q9ULZ0 132 aa5.73□□□□□ -1.49
HMGA1P4-201ENST00000428643 TP53TG1Q9Y2A0 90 aa5.73□□□□□ -1.49
HMGA1P4-201ENST00000428643 V9GYV3 84 aa5.73□□□□□ -1.49
HMGA1P4-201ENST00000428643 IGHV3-16A0A0C4DH30 117 aa5.72□□□□□ -1.49
HMGA1P4-201ENST00000428643 IGHV4-28A0A0C4DH34 117 aa5.72□□□□□ -1.49
HMGA1P4-201ENST00000428643 SMIM9A6NGZ8 99 aa5.72□□□□□ -1.49
HMGA1P4-201ENST00000428643 A8MWL6 223 aa5.72□□□□□ -1.49
HMGA1P4-201ENST00000428643 GNRH2O43555 120 aa5.72□□□□□ -1.49
HMGA1P4-201ENST00000428643 S100A1P23297 94 aa5.72□□□□□ -1.49
HMGA1P4-201ENST00000428643 FER1L6-AS1Q8NA97 138 aa5.72□□□□□ -1.49
HMGA1P4-201ENST00000428643 TSKUQ8WUA8 353 aa5.72□□□□□ -1.49
HMGA1P4-201ENST00000428643 TMEM263Q8WUH6 116 aaKnown RBP5.72□□□□□ -1.49
HMGA1P4-201ENST00000428643 ANAPC16Q96DE5 110 aa5.72□□□□□ -1.49
HMGA1P4-201ENST00000428643 C16orf74Q96GX8 76 aa5.72□□□□□ -1.49
HMGA1P4-201ENST00000428643 B9D2Q9BPU9 175 aa5.72□□□□□ -1.49
HMGA1P4-201ENST00000428643 CTDSP1Q9GZU7 261 aa5.72□□□□□ -1.49
HMGA1P4-201ENST00000428643 ZMAT4Q9H898 229 aa5.72□□□□□ -1.49
HMGA1P4-201ENST00000428643 X6R8D5 127 aa5.72□□□□□ -1.49
HMGA1P4-201ENST00000428643 AGRNO00468 2067 aa5.71□□□□□ -1.49
HMGA1P4-201ENST00000428643 MUC21A0A0G2JKD1 596 aa5.71□□□□□ -1.5
HMGA1P4-201ENST00000428643 MUC21A0A140T8X8 626 aa5.71□□□□□ -1.5
HMGA1P4-201ENST00000428643 SNURFLB1AK76 121 aa5.71□□□□□ -1.5
HMGA1P4-201ENST00000428643 DEFB4AO15263 64 aa5.71□□□□□ -1.5
HMGA1P4-201ENST00000428643 CXCL1P09341 107 aa5.71□□□□□ -1.5
HMGA1P4-201ENST00000428643 MIFP14174 115 aa5.71□□□□□ -1.5
HMGA1P4-201ENST00000428643 AZU1P20160 251 aa5.71□□□□□ -1.5
HMGA1P4-201ENST00000428643 ZNF493Q6ZR52 646 aa5.71□□□□□ -1.5
HMGA1P4-201ENST00000428643 RNASE8Q8TDE3 154 aaKnown RBP5.71□□□□□ -1.5
HMGA1P4-201ENST00000428643 BORCS7Q96B45 105 aa5.71□□□□□ -1.5
HMGA1P4-201ENST00000428643 NEU1Q99519 415 aa5.71□□□□□ -1.5
HMGA1P4-201ENST00000428643 TM2D3Q9BRN9 247 aa5.71□□□□□ -1.5
HMGA1P4-201ENST00000428643 GSN-AS1Q9NRJ2 163 aa5.71□□□□□ -1.5
HMGA1P4-201ENST00000428643 MDFICQ9P1T7 246 aa5.71□□□□□ -1.5
HMGA1P4-201ENST00000428643 A0A087WWC5 75 aa5.7□□□□□ -1.5
HMGA1P4-201ENST00000428643 A0A1W2PPQ1 181 aa5.7□□□□□ -1.5
HMGA1P4-201ENST00000428643 HIGD1CA8MV81 97 aa5.7□□□□□ -1.5
HMGA1P4-201ENST00000428643 ARMS2P0C7Q2 107 aa5.7□□□□□ -1.5
HMGA1P4-201ENST00000428643 MED14OSP0DP75 135 aa5.7□□□□□ -1.5
HMGA1P4-201ENST00000428643 S100PP25815 95 aa5.7□□□□□ -1.5
HMGA1P4-201ENST00000428643 CTRLP40313 264 aa5.7□□□□□ -1.5
HMGA1P4-201ENST00000428643 SSTP61278 116 aa5.7□□□□□ -1.5
HMGA1P4-201ENST00000428643 SPANXN1Q5VSR9 72 aa5.7□□□□□ -1.5
HMGA1P4-201ENST00000428643 KCNIP4Q6PIL6 250 aa5.7□□□□□ -1.5
HMGA1P4-201ENST00000428643 ATRAIDQ6UW56 229 aa5.7□□□□□ -1.5
HMGA1P4-201ENST00000428643 Q8NAQ8 132 aa5.7□□□□□ -1.5
HMGA1P4-201ENST00000428643 C11orf72Q8NBR9 251 aa5.7□□□□□ -1.5
HMGA1P4-201ENST00000428643 GTSF1Q8WW33 167 aa5.7□□□□□ -1.5
HMGA1P4-201ENST00000428643 PGLYRP4Q96LB8 373 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms