RNA–Protein interactions for RNA: ENST00000428394.6

HCLS1-202, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 2 BASIC

Gene HCLS1, Length 1,560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-202ENST00000428394 GCSHP23434 173 aa12.9□□□□□ -0.34
HCLS1-202ENST00000428394 ZFP36P26651 326 aaKnown RBP12.9□□□□□ -0.34
HCLS1-202ENST00000428394 FXYD7P58549 80 aa12.9□□□□□ -0.34
HCLS1-202ENST00000428394 C19orf54Q5BKX5 351 aa12.9□□□□□ -0.34
HCLS1-202ENST00000428394 IGFL4Q6B9Z1 124 aa12.9□□□□□ -0.34
HCLS1-202ENST00000428394 PHLDA1Q8WV24 401 aaPredicted RBP12.9□□□□□ -0.34
HCLS1-202ENST00000428394 GLMPQ8WWB7 406 aa12.9□□□□□ -0.34
HCLS1-202ENST00000428394 C11orf21Q9P2W6 132 aa12.9□□□□□ -0.34
HCLS1-202ENST00000428394 HECTD1Q9ULT8 2610 aa12.9□□□□□ -0.34
HCLS1-202ENST00000428394 IGKV2D-26A0A0A0MRZ7 120 aa12.9□□□□□ -0.35
HCLS1-202ENST00000428394 TRAV21A0A0B4J279 112 aa12.9□□□□□ -0.35
HCLS1-202ENST00000428394 EFNA4P52798 201 aa12.9□□□□□ -0.35
HCLS1-202ENST00000428394 SAMD13Q5VXD3 122 aa12.9□□□□□ -0.35
HCLS1-202ENST00000428394 CLEC19AQ6UXS0 136 aa12.9□□□□□ -0.35
HCLS1-202ENST00000428394 RNF182Q8N6D2 247 aa12.9□□□□□ -0.35
HCLS1-202ENST00000428394 C5orf56Q8N8D9 126 aa12.9□□□□□ -0.35
HCLS1-202ENST00000428394 MOB4Q9Y3A3 225 aa12.9□□□□□ -0.35
HCLS1-202ENST00000428394 E9PLD3 99 aa12.89□□□□□ -0.35
HCLS1-202ENST00000428394 LY6HO94772 140 aa12.89□□□□□ -0.35
HCLS1-202ENST00000428394 APRG1Q8IVJ8 170 aa12.89□□□□□ -0.35
HCLS1-202ENST00000428394 DPH3P1Q9H4G8 78 aa12.89□□□□□ -0.35
HCLS1-202ENST00000428394 A0A1B0GWB2 263 aa12.88□□□□□ -0.35
HCLS1-202ENST00000428394 F8W1H4 67 aa12.88□□□□□ -0.35
HCLS1-202ENST00000428394 NDUFA4O00483 81 aa12.88□□□□□ -0.35
HCLS1-202ENST00000428394 NPFFO15130 113 aa12.88□□□□□ -0.35
HCLS1-202ENST00000428394 TRGV3P03979 118 aa12.88□□□□□ -0.35
HCLS1-202ENST00000428394 SAA4P35542 130 aa12.88□□□□□ -0.35
HCLS1-202ENST00000428394 FXYD2P54710 66 aa12.88□□□□□ -0.35
HCLS1-202ENST00000428394 LY6DQ14210 128 aa12.88□□□□□ -0.35
HCLS1-202ENST00000428394 POM121L12Q8N7R1 296 aa12.88□□□□□ -0.35
HCLS1-202ENST00000428394 TOMM6Q96B49 74 aa12.88□□□□□ -0.35
HCLS1-202ENST00000428394 MRPL35Q9NZE8 188 aaKnown RBP12.88□□□□□ -0.35
HCLS1-202ENST00000428394 J3QR89 54 aa12.87□□□□□ -0.35
HCLS1-202ENST00000428394 OR10J6PQ8NGY7 276 aa12.87□□□□□ -0.35
HCLS1-202ENST00000428394 C16orf92Q96LL3 132 aa12.87□□□□□ -0.35
HCLS1-202ENST00000428394 TRAV41A0A0B4J266 112 aa12.86□□□□□ -0.35
HCLS1-202ENST00000428394 CYSRT1A8MQ03 144 aa12.86□□□□□ -0.35
HCLS1-202ENST00000428394 GAS8-AS1O95177 125 aa12.86□□□□□ -0.35
HCLS1-202ENST00000428394 PAPPA-AS1Q5QFB9 102 aa12.86□□□□□ -0.35
HCLS1-202ENST00000428394 GTSCR1Q86UQ5 136 aa12.86□□□□□ -0.35
HCLS1-202ENST00000428394 RAB37Q96AX2 223 aa12.86□□□□□ -0.35
HCLS1-202ENST00000428394 USMG5Q96IX5 58 aa12.86□□□□□ -0.35
HCLS1-202ENST00000428394 UFC1Q9Y3C8 167 aa12.86□□□□□ -0.35
HCLS1-202ENST00000428394 IGHV1-69DA0A0B4J2H0 117 aa12.86□□□□□ -0.35
HCLS1-202ENST00000428394 NXPH4O95158 308 aa12.86□□□□□ -0.35
HCLS1-202ENST00000428394 GATA1P15976 413 aaPredicted RBP12.86□□□□□ -0.35
HCLS1-202ENST00000428394 ASIPP42127 132 aa12.86□□□□□ -0.35
HCLS1-202ENST00000428394 SUMO2P61956 95 aaKnown RBP12.86□□□□□ -0.35
HCLS1-202ENST00000428394 WFDC3Q8IUB2 231 aa12.86□□□□□ -0.35
HCLS1-202ENST00000428394 TMEM160Q9NX00 188 aa12.86□□□□□ -0.35
HCLS1-202ENST00000428394 TRAV40A0A0B4J280 105 aa12.85□□□□□ -0.35
HCLS1-202ENST00000428394 OR11H12B2RN74 326 aa12.85□□□□□ -0.35
HCLS1-202ENST00000428394 SCGB1A1P11684 91 aa12.85□□□□□ -0.35
HCLS1-202ENST00000428394 OR11H1Q8NG94 326 aa12.85□□□□□ -0.35
HCLS1-202ENST00000428394 OR11H2Q8NH07 326 aa12.85□□□□□ -0.35
HCLS1-202ENST00000428394 FAM19A4Q96LR4 140 aa12.85□□□□□ -0.35
HCLS1-202ENST00000428394 PPIFP30405 207 aaKnown RBP12.84□□□□□ -0.35
HCLS1-202ENST00000428394 LMO4P61968 165 aa12.84□□□□□ -0.35
HCLS1-202ENST00000428394 NEXN-AS1Q8NBZ9 246 aa12.84□□□□□ -0.35
HCLS1-202ENST00000428394 IGLL5B9A064 214 aa12.83□□□□□ -0.36
HCLS1-202ENST00000428394 SOCS3O14543 225 aa12.83□□□□□ -0.36
HCLS1-202ENST00000428394 SAP30O75446 220 aa12.83□□□□□ -0.36
HCLS1-202ENST00000428394 IGF1P05019 195 aa12.83□□□□□ -0.36
HCLS1-202ENST00000428394 PRB4P10163 310 aaPredicted RBP12.83□□□□□ -0.36
HCLS1-202ENST00000428394 ARL3P36405 182 aa12.83□□□□□ -0.36
HCLS1-202ENST00000428394 FOXI2Q6ZQN5 318 aa12.83□□□□□ -0.36
HCLS1-202ENST00000428394 ZFAND2AQ8N6M9 145 aa12.83□□□□□ -0.36
HCLS1-202ENST00000428394 CHTOPQ9Y3Y2 248 aaKnown RBP12.83□□□□□ -0.36
HCLS1-202ENST00000428394 TRBV7-3A0A075B6L6 115 aa12.82□□□□□ -0.36
HCLS1-202ENST00000428394 IGHV3-35A0A0C4DH35 117 aa12.82□□□□□ -0.36
HCLS1-202ENST00000428394 MYMXA0A1B0GTQ4 84 aa12.82□□□□□ -0.36
HCLS1-202ENST00000428394 TMEM238LA0A1B0GVL6 79 aa12.82□□□□□ -0.36
HCLS1-202ENST00000428394 A6NJY4 79 aa12.82□□□□□ -0.36
HCLS1-202ENST00000428394 H3BVH4 76 aa12.82□□□□□ -0.36
HCLS1-202ENST00000428394 SCGB3A1Q96QR1 104 aa12.82□□□□□ -0.36
HCLS1-202ENST00000428394 NHP2Q9NX24 153 aaKnown RBP12.82□□□□□ -0.36
HCLS1-202ENST00000428394 IGHV3OR16-8A0A075B7F1 116 aa12.81□□□□□ -0.36
HCLS1-202ENST00000428394 G3V318 75 aa12.81□□□□□ -0.36
HCLS1-202ENST00000428394 C12orf74Q32Q52 190 aa12.81□□□□□ -0.36
HCLS1-202ENST00000428394 ZNF479Q96JC4 524 aa12.81□□□□□ -0.36
HCLS1-202ENST00000428394 ZNF580Q9UK33 172 aa12.81□□□□□ -0.36
HCLS1-202ENST00000428394 SPOCK3Q9BQ16 436 aa12.81□□□□□ -0.36
HCLS1-202ENST00000428394 IGHV4OR15-8A0A075B7B6 117 aa12.8□□□□□ -0.36
HCLS1-202ENST00000428394 A0A087WW49 117 aa12.8□□□□□ -0.36
HCLS1-202ENST00000428394 RRN3P1Q2M238 152 aa12.8□□□□□ -0.36
HCLS1-202ENST00000428394 RASL10AQ92737 203 aa12.8□□□□□ -0.36
HCLS1-202ENST00000428394 HIST1H4GQ99525 98 aa12.8□□□□□ -0.36
HCLS1-202ENST00000428394 PHLDA3Q9Y5J5 127 aa12.8□□□□□ -0.36
HCLS1-202ENST00000428394 S100A4P26447 101 aaKnown RBP12.79□□□□□ -0.36
HCLS1-202ENST00000428394 CDSNQ15517 529 aa12.79□□□□□ -0.36
HCLS1-202ENST00000428394 ARHGAP32A7KAX9 2087 aa12.78□□□□□ -0.36
HCLS1-202ENST00000428394 IGHV3-66A0A0C4DH42 116 aa12.78□□□□□ -0.36
HCLS1-202ENST00000428394 TCTAP57738 103 aa12.78□□□□□ -0.36
HCLS1-202ENST00000428394 LYRM7Q5U5X0 104 aa12.78□□□□□ -0.36
HCLS1-202ENST00000428394 MAPKAPK5-AS1Q8N8E1 139 aa12.78□□□□□ -0.36
HCLS1-202ENST00000428394 PTPN13Q12923 2485 aa12.78□□□□□ -0.36
HCLS1-202ENST00000428394 TRAV26-2A0A0B4J265 109 aa12.77□□□□□ -0.36
HCLS1-202ENST00000428394 TM4SF20Q53R12 229 aa12.77□□□□□ -0.36
HCLS1-202ENST00000428394 PRR9Q5T870 116 aa12.77□□□□□ -0.36
HCLS1-202ENST00000428394 TMEM141Q96I45 108 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms