RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 CLUHP3Q96NS8 147 aa8.85□□□□□ -0.99
RFC4-206ENST00000427785 IMMP2LQ96T52 175 aa8.85□□□□□ -0.99
RFC4-206ENST00000427785 TPPP3Q9BW30 176 aa8.85□□□□□ -0.99
RFC4-206ENST00000427785 XCL2Q9UBD3 114 aa8.85□□□□□ -0.99
RFC4-206ENST00000427785 MUC4Q99102 2169 aa8.85□□□□□ -0.99
RFC4-206ENST00000427785 COLCA2A8K830 154 aa8.84□□□□□ -0.99
RFC4-206ENST00000427785 RPS20P60866 119 aaKnown RBP8.84□□□□□ -0.99
RFC4-206ENST00000427785 MRPL54Q6P161 138 aaKnown RBP8.84□□□□□ -0.99
RFC4-206ENST00000427785 Q8N1Y9 231 aa8.84□□□□□ -0.99
RFC4-206ENST00000427785 NUP35Q8NFH5 326 aa8.84□□□□□ -0.99
RFC4-206ENST00000427785 NAT8BQ9UHF3 227 aa8.84□□□□□ -0.99
RFC4-206ENST00000427785 XKRY2A2RUG3 117 aa8.83□□□□□ -1
RFC4-206ENST00000427785 H3BVH4 76 aa8.83□□□□□ -1
RFC4-206ENST00000427785 ZNF324O75467 553 aaPredicted RBP8.83□□□□□ -1
RFC4-206ENST00000427785 TYMSP04818 313 aa8.83□□□□□ -1
RFC4-206ENST00000427785 EGFEM1PQ0D2K5 195 aa8.83□□□□□ -1
RFC4-206ENST00000427785 SAMD5Q5TGI4 173 aa8.83□□□□□ -1
RFC4-206ENST00000427785 FER1L6-AS1Q8NA97 138 aa8.83□□□□□ -1
RFC4-206ENST00000427785 FAM210BQ96KR6 192 aa8.83□□□□□ -1
RFC4-206ENST00000427785 GFRA4Q9GZZ7 299 aa8.83□□□□□ -1
RFC4-206ENST00000427785 TIMM8BQ9Y5J9 83 aaPredicted RBP8.83□□□□□ -1
RFC4-206ENST00000427785 TRBV24-1A0A075B6N3 115 aa8.82□□□□□ -1
RFC4-206ENST00000427785 MUC21A0A0G2JKD1 596 aa8.82□□□□□ -1
RFC4-206ENST00000427785 MUC21A0A140T8X8 626 aa8.82□□□□□ -1
RFC4-206ENST00000427785 AMBPP02760 352 aa8.82□□□□□ -1
RFC4-206ENST00000427785 GIG44P09565 113 aaPredicted RBP8.82□□□□□ -1
RFC4-206ENST00000427785 IGLC6P0CF74 106 aa8.82□□□□□ -1
RFC4-206ENST00000427785 FAM159AQ6UWV7 190 aa8.82□□□□□ -1
RFC4-206ENST00000427785 ZNF575Q86XF7 245 aa8.82□□□□□ -1
RFC4-206ENST00000427785 BTF3L4Q96K17 158 aa8.82□□□□□ -1
RFC4-206ENST00000427785 TP53TG3Q9ULZ0 132 aa8.82□□□□□ -1
RFC4-206ENST00000427785 TRAV9-1A0A075B6T8 112 aa8.81□□□□□ -1
RFC4-206ENST00000427785 IGHV3OR16-12A0A075B7B8 117 aa8.81□□□□□ -1
RFC4-206ENST00000427785 IGHV1OR15-1A0A075B7D0 117 aa8.81□□□□□ -1
RFC4-206ENST00000427785 GNRH2O43555 120 aa8.81□□□□□ -1
RFC4-206ENST00000427785 ARMS2P0C7Q2 107 aa8.81□□□□□ -1
RFC4-206ENST00000427785 FRMD6-AS1P0C7T7 363 aa8.81□□□□□ -1
RFC4-206ENST00000427785 RAB5AP20339 215 aa8.81□□□□□ -1
RFC4-206ENST00000427785 CTRLP40313 264 aa8.81□□□□□ -1
RFC4-206ENST00000427785 ASIPP42127 132 aa8.81□□□□□ -1
RFC4-206ENST00000427785 NUTF2P61970 127 aaKnown RBP8.81□□□□□ -1
RFC4-206ENST00000427785 LYZL1Q6UWQ5 148 aa8.81□□□□□ -1
RFC4-206ENST00000427785 PYGO2Q9BRQ0 406 aa8.81□□□□□ -1
RFC4-206ENST00000427785 FAM231BA6NCW3 169 aa8.8□□□□□ -1
RFC4-206ENST00000427785 SPRY2O43597 315 aa8.8□□□□□ -1
RFC4-206ENST00000427785 HTN1P15515 57 aa8.8□□□□□ -1
RFC4-206ENST00000427785 SSTP61278 116 aa8.8□□□□□ -1
RFC4-206ENST00000427785 MORN3Q6PF18 240 aaPredicted RBP8.8□□□□□ -1
RFC4-206ENST00000427785 C1orf158Q8N1D5 194 aa8.8□□□□□ -1
RFC4-206ENST00000427785 NACAE9PAV3 2078 aa8.8□□□□□ -1
RFC4-206ENST00000427785 LOC102724200A0A096LPH7 203 aaPredicted RBP8.79□□□□□ -1
RFC4-206ENST00000427785 CBY3A6NI87 242 aa8.79□□□□□ -1
RFC4-206ENST00000427785 PRM2P04554 102 aa8.79□□□□□ -1
RFC4-206ENST00000427785 IGHV4-30-4P0DP06 118 aa8.79□□□□□ -1
RFC4-206ENST00000427785 S100A4P26447 101 aaKnown RBP8.79□□□□□ -1
RFC4-206ENST00000427785 RPS10P46783 165 aaKnown RBP8.79□□□□□ -1
RFC4-206ENST00000427785 OR10AG1Q8NH19 301 aa8.79□□□□□ -1
RFC4-206ENST00000427785 BORCS7Q96B45 105 aa8.79□□□□□ -1
RFC4-206ENST00000427785 KCNS1Q96KK3 526 aa8.79□□□□□ -1
RFC4-206ENST00000427785 LINC01587Q99440 93 aa8.79□□□□□ -1
RFC4-206ENST00000427785 TMEM208Q9BTX3 173 aa8.79□□□□□ -1
RFC4-206ENST00000427785 TRGV11A0A075B6L2 103 aa8.78□□□□□ -1
RFC4-206ENST00000427785 IGHV3-16A0A0C4DH30 117 aa8.78□□□□□ -1
RFC4-206ENST00000427785 A0A1B0GUT8 65 aa8.78□□□□□ -1
RFC4-206ENST00000427785 A0A1B0GXF2 115 aa8.78□□□□□ -1
RFC4-206ENST00000427785 SNAI2O43623 268 aa8.78□□□□□ -1
RFC4-206ENST00000427785 RNASE3P12724 160 aaKnown RBP8.78□□□□□ -1
RFC4-206ENST00000427785 CAMPP49913 170 aa8.78□□□□□ -1
RFC4-206ENST00000427785 HBBP68871 147 aa8.78□□□□□ -1
RFC4-206ENST00000427785 TDRG1Q3Y452 100 aa8.78□□□□□ -1
RFC4-206ENST00000427785 C20orf144Q9BQM9 153 aa8.78□□□□□ -1
RFC4-206ENST00000427785 C1QTNF4Q9BXJ3 329 aa8.78□□□□□ -1
RFC4-206ENST00000427785 SNURFLB1AK76 121 aa8.77□□□□□ -1.01
RFC4-206ENST00000427785 PRB2P02812 416 aaPredicted RBP8.77□□□□□ -1.01
RFC4-206ENST00000427785 FOXA3P55318 350 aaPredicted RBP8.77□□□□□ -1.01
RFC4-206ENST00000427785 RAB4BP61018 213 aa8.77□□□□□ -1.01
RFC4-206ENST00000427785 ATP5L2Q7Z4Y8 100 aa8.77□□□□□ -1.01
RFC4-206ENST00000427785 TMEM256Q8N2U0 113 aa8.77□□□□□ -1.01
RFC4-206ENST00000427785 CSTL1Q9H114 145 aa8.77□□□□□ -1.01
RFC4-206ENST00000427785 MDFICQ9P1T7 246 aa8.77□□□□□ -1.01
RFC4-206ENST00000427785 TMA7Q9Y2S6 64 aaKnown RBP8.77□□□□□ -1.01
RFC4-206ENST00000427785 GOLT1BQ9Y3E0 138 aa8.77□□□□□ -1.01
RFC4-206ENST00000427785 PKD1L1Q8TDX9 2849 aa8.76□□□□□ -1.01
RFC4-206ENST00000427785 M0R381 172 aa8.76□□□□□ -1.01
RFC4-206ENST00000427785 OR5AL1P0C617 328 aa8.76□□□□□ -1.01
RFC4-206ENST00000427785 MED14OSP0DP75 135 aa8.76□□□□□ -1.01
RFC4-206ENST00000427785 APOC4P55056 127 aa8.76□□□□□ -1.01
RFC4-206ENST00000427785 ZNF415Q09FC8 603 aa8.76□□□□□ -1.01
RFC4-206ENST00000427785 RIGQ13278 110 aa8.76□□□□□ -1.01
RFC4-206ENST00000427785 DNLZQ5SXM8 178 aa8.76□□□□□ -1.01
RFC4-206ENST00000427785 TMEM136Q6ZRR5 245 aa8.76□□□□□ -1.01
RFC4-206ENST00000427785 CSNK1G2-AS1Q8NCQ2 148 aa8.76□□□□□ -1.01
RFC4-206ENST00000427785 C9orf85Q96MD7 179 aa8.76□□□□□ -1.01
RFC4-206ENST00000427785 SSBP4Q9BWG4 385 aaPredicted RBP8.76□□□□□ -1.01
RFC4-206ENST00000427785 MSRB1Q9NZV6 116 aa8.76□□□□□ -1.01
RFC4-206ENST00000427785 ZMAT5Q9UDW3 170 aaKnown RBP8.76□□□□□ -1.01
RFC4-206ENST00000427785 DNAH3Q8TD57 4116 aa8.75□□□□□ -1.01
RFC4-206ENST00000427785 TWIST1Q15672 202 aa8.75□□□□□ -1.01
RFC4-206ENST00000427785 DEFB135Q30KP9 77 aa8.75□□□□□ -1.01
RFC4-206ENST00000427785 SPANXN1Q5VSR9 72 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms