RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 MDFICQ9P1T7 246 aa9.75□□□□□ -0.85
PRPF39-202ENST00000424478 ODF3Q96PU9 254 aa9.75□□□□□ -0.85
PRPF39-202ENST00000424478 LENEPQ9Y5L5 61 aa9.75□□□□□ -0.85
PRPF39-202ENST00000424478 URGCP-MRPS24S4R325 110 aa9.75□□□□□ -0.85
PRPF39-202ENST00000424478 TRAV21A0A0B4J279 112 aa9.74□□□□□ -0.85
PRPF39-202ENST00000424478 B4DEV8 164 aa9.74□□□□□ -0.85
PRPF39-202ENST00000424478 Q6AWC8 147 aa9.74□□□□□ -0.85
PRPF39-202ENST00000424478 TMEM88Q6PEY1 159 aa9.74□□□□□ -0.85
PRPF39-202ENST00000424478 MUC4Q99102 2169 aa9.74□□□□□ -0.85
PRPF39-202ENST00000424478 CBY3A6NI87 242 aa9.74□□□□□ -0.85
PRPF39-202ENST00000424478 ZMAT5Q9UDW3 170 aaKnown RBP9.74□□□□□ -0.85
PRPF39-202ENST00000424478 FBLL1A6NHQ2 334 aaKnown RBP9.73□□□□□ -0.85
PRPF39-202ENST00000424478 OR10G8Q8NGN5 311 aa9.73□□□□□ -0.85
PRPF39-202ENST00000424478 V9GYV3 84 aa9.73□□□□□ -0.85
PRPF39-202ENST00000424478 GATCO43716 136 aaKnown RBP9.73□□□□□ -0.85
PRPF39-202ENST00000424478 APOC4P55056 127 aa9.73□□□□□ -0.85
PRPF39-202ENST00000424478 FAM159AQ6UWV7 190 aa9.73□□□□□ -0.85
PRPF39-202ENST00000424478 TMEM189A5PLL7 270 aa9.73□□□□□ -0.85
PRPF39-202ENST00000424478 NDUFS6O75380 124 aaKnown RBP9.73□□□□□ -0.85
PRPF39-202ENST00000424478 TYMSP04818 313 aa9.73□□□□□ -0.85
PRPF39-202ENST00000424478 FAM3BP58499 235 aaPredicted RBP9.73□□□□□ -0.85
PRPF39-202ENST00000424478 H3BVH4 76 aa9.72□□□□□ -0.85
PRPF39-202ENST00000424478 MORN3Q6PF18 240 aaPredicted RBP9.72□□□□□ -0.85
PRPF39-202ENST00000424478 COX8CQ7Z4L0 72 aa9.72□□□□□ -0.85
PRPF39-202ENST00000424478 CBLN2Q8IUK8 224 aa9.72□□□□□ -0.85
PRPF39-202ENST00000424478 SVBPQ8N300 66 aa9.72□□□□□ -0.85
PRPF39-202ENST00000424478 RPP21Q9H633 154 aaKnown RBP9.72□□□□□ -0.85
PRPF39-202ENST00000424478 LY96Q9Y6Y9 160 aa9.72□□□□□ -0.85
PRPF39-202ENST00000424478 IGHV1OR15-1A0A075B7D0 117 aa9.72□□□□□ -0.85
PRPF39-202ENST00000424478 OR11H2Q8NH07 326 aa9.72□□□□□ -0.85
PRPF39-202ENST00000424478 GTSF1Q8WW33 167 aa9.72□□□□□ -0.85
PRPF39-202ENST00000424478 CLUHP3Q96NS8 147 aa9.72□□□□□ -0.85
PRPF39-202ENST00000424478 GSN-AS1Q9NRJ2 163 aa9.72□□□□□ -0.85
PRPF39-202ENST00000424478 PNRC1Q12796 327 aaPredicted RBP9.71□□□□□ -0.86
PRPF39-202ENST00000424478 RCHY1Q96PM5 261 aa9.71□□□□□ -0.86
PRPF39-202ENST00000424478 X6R8D5 127 aa9.71□□□□□ -0.86
PRPF39-202ENST00000424478 NACAE9PAV3 2078 aa9.7□□□□□ -0.86
PRPF39-202ENST00000424478 TRBV7-9A0A0J9YWB2 115 aa9.7□□□□□ -0.86
PRPF39-202ENST00000424478 C15orf54Q8N8G6 183 aa9.7□□□□□ -0.86
PRPF39-202ENST00000424478 SMIM12Q96EX1 92 aa9.7□□□□□ -0.86
PRPF39-202ENST00000424478 PGLYRP4Q96LB8 373 aa9.7□□□□□ -0.86
PRPF39-202ENST00000424478 C1QTNF4Q9BXJ3 329 aa9.7□□□□□ -0.86
PRPF39-202ENST00000424478 H7BYZ3 331 aa9.7□□□□□ -0.86
PRPF39-202ENST00000424478 ZNF705AQ6ZN79 300 aaPredicted RBP9.7□□□□□ -0.86
PRPF39-202ENST00000424478 NEU1Q99519 415 aa9.7□□□□□ -0.86
PRPF39-202ENST00000424478 OVOL2Q9BRP0 275 aa9.7□□□□□ -0.86
PRPF39-202ENST00000424478 OSTCQ9NRP0 149 aa9.7□□□□□ -0.86
PRPF39-202ENST00000424478 GOLT1BQ9Y3E0 138 aa9.7□□□□□ -0.86
PRPF39-202ENST00000424478 KIR2DL5BA0A0G2JN68 375 aa9.69□□□□□ -0.86
PRPF39-202ENST00000424478 KIR2DL5BA0A0G2JPC4 375 aa9.69□□□□□ -0.86
PRPF39-202ENST00000424478 SNAPINO95295 136 aa9.69□□□□□ -0.86
PRPF39-202ENST00000424478 KIR2DL5AQ8N109 375 aa9.69□□□□□ -0.86
PRPF39-202ENST00000424478 KIR2DL5BQ8NHK3 375 aa9.69□□□□□ -0.86
PRPF39-202ENST00000424478 MT-ND4LP03901 98 aa9.69□□□□□ -0.86
PRPF39-202ENST00000424478 S100A4P26447 101 aaKnown RBP9.69□□□□□ -0.86
PRPF39-202ENST00000424478 LINC01559Q495D7 138 aa9.69□□□□□ -0.86
PRPF39-202ENST00000424478 ARMS2P0C7Q2 107 aa9.69□□□□□ -0.86
PRPF39-202ENST00000424478 RNASE3P12724 160 aaKnown RBP9.69□□□□□ -0.86
PRPF39-202ENST00000424478 MSRB1Q9NZV6 116 aa9.69□□□□□ -0.86
PRPF39-202ENST00000424478 HIGD1CA8MV81 97 aa9.68□□□□□ -0.86
PRPF39-202ENST00000424478 A8MZ25 164 aa9.68□□□□□ -0.86
PRPF39-202ENST00000424478 FAM231DQ6ZW35 169 aa9.68□□□□□ -0.86
PRPF39-202ENST00000424478 OR10AG1Q8NH19 301 aa9.68□□□□□ -0.86
PRPF39-202ENST00000424478 RNF183Q96D59 192 aa9.68□□□□□ -0.86
PRPF39-202ENST00000424478 IGHV3-16A0A0C4DH30 117 aa9.67□□□□□ -0.86
PRPF39-202ENST00000424478 LYZL1Q6UWQ5 148 aa9.67□□□□□ -0.86
PRPF39-202ENST00000424478 PYGO2Q9BRQ0 406 aa9.67□□□□□ -0.86
PRPF39-202ENST00000424478 IGHV4-28A0A0C4DH34 117 aa9.67□□□□□ -0.86
PRPF39-202ENST00000424478 M0R381 172 aa9.67□□□□□ -0.86
PRPF39-202ENST00000424478 AMBPP02760 352 aa9.67□□□□□ -0.86
PRPF39-202ENST00000424478 RRN3P1Q2M238 152 aa9.67□□□□□ -0.86
PRPF39-202ENST00000424478 JPT2Q9H910 190 aa9.67□□□□□ -0.86
PRPF39-202ENST00000424478 FOXA3P55318 350 aaPredicted RBP9.67□□□□□ -0.86
PRPF39-202ENST00000424478 MRPL54Q6P161 138 aaKnown RBP9.67□□□□□ -0.86
PRPF39-202ENST00000424478 NOP10Q9NPE3 64 aaKnown RBP9.67□□□□□ -0.86
PRPF39-202ENST00000424478 MRPL16Q9NX20 251 aaKnown RBP9.67□□□□□ -0.86
PRPF39-202ENST00000424478 A0A1W2PPQ1 181 aa9.66□□□□□ -0.86
PRPF39-202ENST00000424478 ASIPP42127 132 aa9.66□□□□□ -0.86
PRPF39-202ENST00000424478 Q6ZWC4 215 aa9.66□□□□□ -0.86
PRPF39-202ENST00000424478 C11orf72Q8NBR9 251 aa9.66□□□□□ -0.86
PRPF39-202ENST00000424478 NUP35Q8NFH5 326 aa9.66□□□□□ -0.86
PRPF39-202ENST00000424478 RNASE8Q8TDE3 154 aaKnown RBP9.66□□□□□ -0.86
PRPF39-202ENST00000424478 BIN3Q9NQY0 253 aa9.66□□□□□ -0.86
PRPF39-202ENST00000424478 PLAC8L1A1L4L8 177 aa9.66□□□□□ -0.86
PRPF39-202ENST00000424478 RHEBQ15382 184 aa9.66□□□□□ -0.86
PRPF39-202ENST00000424478 S100A1P23297 94 aa9.65□□□□□ -0.86
PRPF39-202ENST00000424478 TDRG1Q3Y452 100 aa9.65□□□□□ -0.86
PRPF39-202ENST00000424478 DMRTA1Q5VZB9 504 aa9.65□□□□□ -0.86
PRPF39-202ENST00000424478 FER1L6-AS1Q8NA97 138 aa9.65□□□□□ -0.86
PRPF39-202ENST00000424478 TSKUQ8WUA8 353 aa9.65□□□□□ -0.86
PRPF39-202ENST00000424478 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.65□□□□□ -0.86
PRPF39-202ENST00000424478 TGIF2-C20orf24A0A0A6YYL0 155 aa9.65□□□□□ -0.87
PRPF39-202ENST00000424478 A8MWL6 223 aa9.65□□□□□ -0.87
PRPF39-202ENST00000424478 Q6ZTI0 123 aa9.65□□□□□ -0.87
PRPF39-202ENST00000424478 IL36BQ9NZH7 164 aa9.65□□□□□ -0.87
PRPF39-202ENST00000424478 CELA1Q9UNI1 258 aa9.65□□□□□ -0.87
PRPF39-202ENST00000424478 TMEM256Q8N2U0 113 aa9.64□□□□□ -0.87
PRPF39-202ENST00000424478 ANAPC16Q96DE5 110 aa9.64□□□□□ -0.87
PRPF39-202ENST00000424478 KCNS1Q96KK3 526 aa9.64□□□□□ -0.87
PRPF39-202ENST00000424478 IGLC6P0CF74 106 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms