RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 SMPXQ9UHP9 88 aa12.21□□□□□ -0.45
CTSB-203ENST00000420692 ZNF580Q9UK33 172 aa12.21□□□□□ -0.45
CTSB-203ENST00000420692 CR1P17927 2039 aa12.21□□□□□ -0.45
CTSB-203ENST00000420692 NAV2Q8IVL1 2488 aa12.21□□□□□ -0.46
CTSB-203ENST00000420692 A1L4Q6 167 aa12.21□□□□□ -0.46
CTSB-203ENST00000420692 OVOL1O14753 267 aa12.21□□□□□ -0.46
CTSB-203ENST00000420692 SRD5A1P18405 259 aa12.21□□□□□ -0.46
CTSB-203ENST00000420692 RPL11P62913 178 aaKnown RBP12.21□□□□□ -0.46
CTSB-203ENST00000420692 PEF1Q9UBV8 284 aaKnown RBP12.21□□□□□ -0.46
CTSB-203ENST00000420692 NBPF19A0A087WUL8 3843 aa12.2□□□□□ -0.46
CTSB-203ENST00000420692 IGLV2-18A0A075B6J9 118 aa12.2□□□□□ -0.46
CTSB-203ENST00000420692 H3BVH4 76 aa12.2□□□□□ -0.46
CTSB-203ENST00000420692 TGFAP01135 160 aa12.2□□□□□ -0.46
CTSB-203ENST00000420692 MAP1LC3AQ9H492 121 aa12.2□□□□□ -0.46
CTSB-203ENST00000420692 DAZ1Q9NQZ3 744 aaKnown RBP12.2□□□□□ -0.46
CTSB-203ENST00000420692 WFDC3Q8IUB2 231 aa12.19□□□□□ -0.46
CTSB-203ENST00000420692 NRACQ8N912 160 aa12.19□□□□□ -0.46
CTSB-203ENST00000420692 OR10J6PQ8NGY7 276 aa12.19□□□□□ -0.46
CTSB-203ENST00000420692 MS4A6AQ9H2W1 248 aa12.19□□□□□ -0.46
CTSB-203ENST00000420692 TRAV26-2A0A0B4J265 109 aa12.19□□□□□ -0.46
CTSB-203ENST00000420692 ZNF843Q8N446 348 aa12.19□□□□□ -0.46
CTSB-203ENST00000420692 HSBP1L1C9JCN9 74 aa12.18□□□□□ -0.46
CTSB-203ENST00000420692 LGALS9BQ3B8N2 356 aa12.18□□□□□ -0.46
CTSB-203ENST00000420692 LGALS9CQ6DKI2 356 aa12.18□□□□□ -0.46
CTSB-203ENST00000420692 SLC25A34Q6PIV7 304 aa12.18□□□□□ -0.46
CTSB-203ENST00000420692 Q6ZVH6 145 aa12.18□□□□□ -0.46
CTSB-203ENST00000420692 APCP25054 2843 aa12.18□□□□□ -0.46
CTSB-203ENST00000420692 COX6B1P14854 86 aa12.18□□□□□ -0.46
CTSB-203ENST00000420692 CACNG7P62955 275 aa12.18□□□□□ -0.46
CTSB-203ENST00000420692 ANKRD39Q53RE8 183 aa12.18□□□□□ -0.46
CTSB-203ENST00000420692 APRG1Q8IVJ8 170 aa12.18□□□□□ -0.46
CTSB-203ENST00000420692 IFI27L1Q96BM0 104 aa12.18□□□□□ -0.46
CTSB-203ENST00000420692 GOLT1BQ9Y3E0 138 aa12.18□□□□□ -0.46
CTSB-203ENST00000420692 RNF223E7ERA6 249 aa12.17□□□□□ -0.46
CTSB-203ENST00000420692 K7EMT4 169 aa12.17□□□□□ -0.46
CTSB-203ENST00000420692 DLEU1O43261 78 aa12.17□□□□□ -0.46
CTSB-203ENST00000420692 FSHBP01225 129 aa12.17□□□□□ -0.46
CTSB-203ENST00000420692 OR2K2Q8NGT1 345 aa12.17□□□□□ -0.46
CTSB-203ENST00000420692 J3QLI3 93 aa12.17□□□□□ -0.46
CTSB-203ENST00000420692 NPSP0C0P6 89 aa12.17□□□□□ -0.46
CTSB-203ENST00000420692 RNASE4P34096 147 aaKnown RBP12.17□□□□□ -0.46
CTSB-203ENST00000420692 LEPP41159 167 aa12.17□□□□□ -0.46
CTSB-203ENST00000420692 SPANXN1Q5VSR9 72 aa12.17□□□□□ -0.46
CTSB-203ENST00000420692 DCANP1Q8TF63 244 aa12.17□□□□□ -0.46
CTSB-203ENST00000420692 MUC4Q99102 2169 aa12.16□□□□□ -0.46
CTSB-203ENST00000420692 FCER1GP30273 86 aa12.16□□□□□ -0.46
CTSB-203ENST00000420692 ANXA2RQ3ZCQ2 193 aa12.16□□□□□ -0.46
CTSB-203ENST00000420692 MPV17L2Q567V2 206 aa12.16□□□□□ -0.46
CTSB-203ENST00000420692 NXT2Q9NPJ8 142 aaKnown RBP12.16□□□□□ -0.46
CTSB-203ENST00000420692 UFC1Q9Y3C8 167 aa12.16□□□□□ -0.46
CTSB-203ENST00000420692 CREBBPQ92793 2442 aa12.16□□□□□ -0.46
CTSB-203ENST00000420692 AKAP9Q99996 3911 aa12.16□□□□□ -0.46
CTSB-203ENST00000420692 TRAV21A0A0B4J279 112 aa12.15□□□□□ -0.46
CTSB-203ENST00000420692 Q8N8P6 123 aa12.15□□□□□ -0.46
CTSB-203ENST00000420692 C18orf15Q96N68 181 aa12.15□□□□□ -0.46
CTSB-203ENST00000420692 PRSS47A8MTI9 375 aa12.15□□□□□ -0.46
CTSB-203ENST00000420692 GNRH2O43555 120 aa12.15□□□□□ -0.46
CTSB-203ENST00000420692 COX8AP10176 69 aa12.15□□□□□ -0.46
CTSB-203ENST00000420692 FGF6P10767 208 aa12.15□□□□□ -0.46
CTSB-203ENST00000420692 C2orf91Q6ZV80 131 aa12.15□□□□□ -0.46
CTSB-203ENST00000420692 DEFB125Q8N687 156 aa12.15□□□□□ -0.46
CTSB-203ENST00000420692 DKK2Q9UBU2 259 aa12.15□□□□□ -0.46
CTSB-203ENST00000420692 IGHV4-31P0DP07 118 aa12.14□□□□□ -0.47
CTSB-203ENST00000420692 GAGE1Q13065 139 aa12.14□□□□□ -0.47
CTSB-203ENST00000420692 SORL1Q92673 2214 aa12.14□□□□□ -0.47
CTSB-203ENST00000420692 TMEM158Q8WZ71 300 aa12.14□□□□□ -0.47
CTSB-203ENST00000420692 PRRC2AP48634 2157 aaKnown RBP12.13□□□□□ -0.47
CTSB-203ENST00000420692 M0R381 172 aa12.13□□□□□ -0.47
CTSB-203ENST00000420692 CD5LO43866 347 aa12.13□□□□□ -0.47
CTSB-203ENST00000420692 NUDT3O95989 172 aa12.13□□□□□ -0.47
CTSB-203ENST00000420692 RNASE3P12724 160 aaKnown RBP12.13□□□□□ -0.47
CTSB-203ENST00000420692 SMIM15Q7Z3B0 74 aa12.13□□□□□ -0.47
CTSB-203ENST00000420692 TLN2Q9Y4G6 2542 aa12.12□□□□□ -0.47
CTSB-203ENST00000420692 AGRNO00468 2067 aa12.12□□□□□ -0.47
CTSB-203ENST00000420692 TRBV7-9A0A0J9YWB2 115 aa12.12□□□□□ -0.47
CTSB-203ENST00000420692 TMEM89A2RUT3 159 aa12.12□□□□□ -0.47
CTSB-203ENST00000420692 BVES-AS1Q5T3Y7 98 aa12.12□□□□□ -0.47
CTSB-203ENST00000420692 Q6YL49 198 aa12.12□□□□□ -0.47
CTSB-203ENST00000420692 WFDC12Q8WWY7 111 aa12.12□□□□□ -0.47
CTSB-203ENST00000420692 DPF1Q92782 380 aa12.12□□□□□ -0.47
CTSB-203ENST00000420692 ZNF702PQ9H963 129 aa12.12□□□□□ -0.47
CTSB-203ENST00000420692 VPREB3Q9UKI3 123 aa12.12□□□□□ -0.47
CTSB-203ENST00000420692 MYO9AB2RTY4 2548 aa12.12□□□□□ -0.47
CTSB-203ENST00000420692 KLLNB2CW77 178 aa12.11□□□□□ -0.47
CTSB-203ENST00000420692 TCTAP57738 103 aa12.11□□□□□ -0.47
CTSB-203ENST00000420692 MYOZ3Q8TDC0 251 aa12.11□□□□□ -0.47
CTSB-203ENST00000420692 ODF1Q14990 250 aa12.11□□□□□ -0.47
CTSB-203ENST00000420692 ASIPP42127 132 aa12.1□□□□□ -0.47
CTSB-203ENST00000420692 ZMAT4Q9H898 229 aa12.1□□□□□ -0.47
CTSB-203ENST00000420692 BEX4Q9NWD9 120 aaPredicted RBP12.1□□□□□ -0.47
CTSB-203ENST00000420692 C14orf178Q8N769 122 aaPredicted RBP12.1□□□□□ -0.47
CTSB-203ENST00000420692 RASL10AQ92737 203 aa12.1□□□□□ -0.47
CTSB-203ENST00000420692 SMIM17P0DL12 118 aa12.09□□□□□ -0.47
CTSB-203ENST00000420692 S100A4P26447 101 aaKnown RBP12.09□□□□□ -0.47
CTSB-203ENST00000420692 MRAP2Q96G30 205 aa12.09□□□□□ -0.47
CTSB-203ENST00000420692 COX11Q9Y6N1 276 aa12.09□□□□□ -0.47
CTSB-203ENST00000420692 ITPR3Q14573 2671 aa12.09□□□□□ -0.47
CTSB-203ENST00000420692 IGHV4OR15-8A0A075B7B6 117 aa12.09□□□□□ -0.47
CTSB-203ENST00000420692 A0A087WW49 117 aa12.09□□□□□ -0.47
CTSB-203ENST00000420692 HOXA3O43365 443 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms