RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 Q8N2B8 174 aa9.89□□□□□ -0.83
LINC00642-201ENST00000419459 LYPD1Q8N2G4 141 aa9.89□□□□□ -0.83
LINC00642-201ENST00000419459 HIGD1BQ9P298 99 aa9.89□□□□□ -0.83
LINC00642-201ENST00000419459 HIGD1AQ9Y241 93 aa9.89□□□□□ -0.83
LINC00642-201ENST00000419459 COL6A5A8TX70 2615 aa9.89□□□□□ -0.83
LINC00642-201ENST00000419459 TRRAPQ9Y4A5 3859 aa9.89□□□□□ -0.83
LINC00642-201ENST00000419459 HBDP02042 147 aa9.89□□□□□ -0.83
LINC00642-201ENST00000419459 CFHR3Q02985 330 aa9.89□□□□□ -0.83
LINC00642-201ENST00000419459 SAMD13Q5VXD3 122 aa9.89□□□□□ -0.83
LINC00642-201ENST00000419459 C11orf44Q8N8P7 122 aa9.89□□□□□ -0.83
LINC00642-201ENST00000419459 LINC01006Q8NI28 216 aa9.89□□□□□ -0.83
LINC00642-201ENST00000419459 FAM110DQ8TAY7 271 aaPredicted RBP9.89□□□□□ -0.83
LINC00642-201ENST00000419459 SRSF8Q9BRL6 282 aaKnown RBP9.89□□□□□ -0.83
LINC00642-201ENST00000419459 VWFP04275 2813 aa9.88□□□□□ -0.83
LINC00642-201ENST00000419459 STAB1Q9NY15 2570 aa9.88□□□□□ -0.83
LINC00642-201ENST00000419459 IGLV11-55A0A075B6I3 123 aa9.88□□□□□ -0.83
LINC00642-201ENST00000419459 SNAI2O43623 268 aa9.88□□□□□ -0.83
LINC00642-201ENST00000419459 CRIP2P52943 208 aaPredicted RBP9.88□□□□□ -0.83
LINC00642-201ENST00000419459 LINC01559Q495D7 138 aa9.88□□□□□ -0.83
LINC00642-201ENST00000419459 PRR31Q5SQ13 230 aa9.88□□□□□ -0.83
LINC00642-201ENST00000419459 PRNTQ86SH4 94 aa9.88□□□□□ -0.83
LINC00642-201ENST00000419459 OR8A1Q8NGG7 326 aa9.88□□□□□ -0.83
LINC00642-201ENST00000419459 THYN1Q9P016 225 aa9.88□□□□□ -0.83
LINC00642-201ENST00000419459 SMIM13P0DJ93 91 aa9.87□□□□□ -0.83
LINC00642-201ENST00000419459 PF4V1P10720 104 aa9.87□□□□□ -0.83
LINC00642-201ENST00000419459 FOXE3Q13461 319 aa9.87□□□□□ -0.83
LINC00642-201ENST00000419459 PRIMA1Q86XR5 153 aa9.87□□□□□ -0.83
LINC00642-201ENST00000419459 ORMDL3Q8N138 153 aa9.87□□□□□ -0.83
LINC00642-201ENST00000419459 ZNF414Q96IQ9 312 aa9.87□□□□□ -0.83
LINC00642-201ENST00000419459 TIMM8BQ9Y5J9 83 aaPredicted RBP9.87□□□□□ -0.83
LINC00642-201ENST00000419459 WNK1Q9H4A3 2382 aa9.87□□□□□ -0.83
LINC00642-201ENST00000419459 TRGV3P03979 118 aa9.87□□□□□ -0.83
LINC00642-201ENST00000419459 IFI27P40305 119 aaPredicted RBP9.87□□□□□ -0.83
LINC00642-201ENST00000419459 C15orf32Q32M92 178 aa9.87□□□□□ -0.83
LINC00642-201ENST00000419459 GOLT1AQ6ZVE7 132 aa9.87□□□□□ -0.83
LINC00642-201ENST00000419459 SIGLEC8Q9NYZ4 499 aa9.87□□□□□ -0.83
LINC00642-201ENST00000419459 J3QR89 54 aa9.86□□□□□ -0.83
LINC00642-201ENST00000419459 K7EIM0 57 aa9.86□□□□□ -0.83
LINC00642-201ENST00000419459 CACNG7P62955 275 aa9.86□□□□□ -0.83
LINC00642-201ENST00000419459 SAMD5Q5TGI4 173 aa9.86□□□□□ -0.83
LINC00642-201ENST00000419459 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.86□□□□□ -0.83
LINC00642-201ENST00000419459 IFI27L1Q96BM0 104 aa9.86□□□□□ -0.83
LINC00642-201ENST00000419459 ZC2HC1AQ96GY0 325 aa9.86□□□□□ -0.83
LINC00642-201ENST00000419459 PRELID3AQ96N28 172 aa9.86□□□□□ -0.83
LINC00642-201ENST00000419459 TRAV8-1A0A0A6YYK1 113 aa9.85□□□□□ -0.83
LINC00642-201ENST00000419459 I3L2K1 104 aa9.85□□□□□ -0.83
LINC00642-201ENST00000419459 IGLV1-40P01703 118 aa9.85□□□□□ -0.83
LINC00642-201ENST00000419459 IGHV3-11P01762 117 aa9.85□□□□□ -0.83
LINC00642-201ENST00000419459 PSMB8P28062 276 aa9.85□□□□□ -0.83
LINC00642-201ENST00000419459 FAM104BQ5XKR9 115 aa9.85□□□□□ -0.83
LINC00642-201ENST00000419459 SLC25A39Q9BZJ4 359 aaPredicted RBP9.85□□□□□ -0.83
LINC00642-201ENST00000419459 SERTM2A0A1B0GWG4 89 aa9.85□□□□□ -0.83
LINC00642-201ENST00000419459 FBLL1A6NHQ2 334 aaKnown RBP9.85□□□□□ -0.83
LINC00642-201ENST00000419459 ZNF785A8K8V0 405 aa9.85□□□□□ -0.83
LINC00642-201ENST00000419459 IGHG4P01861 327 aa9.85□□□□□ -0.83
LINC00642-201ENST00000419459 HLA-DRB4P13762 266 aa9.85□□□□□ -0.83
LINC00642-201ENST00000419459 SMPXQ9UHP9 88 aa9.85□□□□□ -0.83
LINC00642-201ENST00000419459 HLA-DRB4X5D2U9 266 aa9.85□□□□□ -0.83
LINC00642-201ENST00000419459 D6R8Y8 96 aa9.84□□□□□ -0.83
LINC00642-201ENST00000419459 RAB9AP51151 201 aa9.84□□□□□ -0.83
LINC00642-201ENST00000419459 TCTEX1D4Q5JR98 221 aa9.84□□□□□ -0.83
LINC00642-201ENST00000419459 PSG8Q9UQ74 426 aa9.84□□□□□ -0.83
LINC00642-201ENST00000419459 TRBV19A0A075B6N1 114 aa9.83□□□□□ -0.84
LINC00642-201ENST00000419459 KHDC1LQ5JSQ8 128 aa9.83□□□□□ -0.84
LINC00642-201ENST00000419459 SIGMAR1Q99720 223 aa9.83□□□□□ -0.84
LINC00642-201ENST00000419459 VGLL1Q99990 258 aa9.83□□□□□ -0.84
LINC00642-201ENST00000419459 IGHV3-35A0A0C4DH35 117 aa9.83□□□□□ -0.84
LINC00642-201ENST00000419459 LINC01546A6NGU7 62 aa9.83□□□□□ -0.84
LINC00642-201ENST00000419459 TRBV12-3P01733 135 aa9.83□□□□□ -0.84
LINC00642-201ENST00000419459 C18orf65Q6ZTR6 163 aa9.83□□□□□ -0.84
LINC00642-201ENST00000419459 S100A7AQ86SG5 101 aa9.83□□□□□ -0.84
LINC00642-201ENST00000419459 RAB37Q96AX2 223 aa9.83□□□□□ -0.84
LINC00642-201ENST00000419459 C16orf95Q9H693 158 aa9.83□□□□□ -0.84
LINC00642-201ENST00000419459 A0A1B0GV72 72 aa9.82□□□□□ -0.84
LINC00642-201ENST00000419459 F8W1H4 67 aa9.82□□□□□ -0.84
LINC00642-201ENST00000419459 F8W735 103 aaPredicted RBP9.82□□□□□ -0.84
LINC00642-201ENST00000419459 ZNF207O43670 478 aaKnown RBP9.82□□□□□ -0.84
LINC00642-201ENST00000419459 NMUP48645 174 aa9.82□□□□□ -0.84
LINC00642-201ENST00000419459 FAM106AQ4KMX7 169 aa9.82□□□□□ -0.84
LINC00642-201ENST00000419459 FOXI2Q6ZQN5 318 aa9.82□□□□□ -0.84
LINC00642-201ENST00000419459 COX8CQ7Z4L0 72 aa9.82□□□□□ -0.84
LINC00642-201ENST00000419459 EXOC3-AS1Q8N2X6 119 aa9.82□□□□□ -0.84
LINC00642-201ENST00000419459 SVIPQ8NHG7 77 aa9.82□□□□□ -0.84
LINC00642-201ENST00000419459 CCDC140Q96MF4 163 aa9.82□□□□□ -0.84
LINC00642-201ENST00000419459 ZNF580Q9UK33 172 aa9.82□□□□□ -0.84
LINC00642-201ENST00000419459 H3BTX0 84 aa9.82□□□□□ -0.84
LINC00642-201ENST00000419459 LYZP61626 148 aa9.82□□□□□ -0.84
LINC00642-201ENST00000419459 KRTAP24-1Q3LI83 254 aa9.82□□□□□ -0.84
LINC00642-201ENST00000419459 CLEC19AQ6UXS0 136 aa9.82□□□□□ -0.84
LINC00642-201ENST00000419459 SIGLEC15Q6ZMC9 328 aa9.82□□□□□ -0.84
LINC00642-201ENST00000419459 SHANK2-AS3Q9BTD1 123 aa9.82□□□□□ -0.84
LINC00642-201ENST00000419459 TM2D2Q9BX73 214 aa9.82□□□□□ -0.84
LINC00642-201ENST00000419459 ZMAT4Q9H898 229 aa9.82□□□□□ -0.84
LINC00642-201ENST00000419459 TEX48A0A1B0GUV7 120 aa9.81□□□□□ -0.84
LINC00642-201ENST00000419459 NDUFA7O95182 113 aa9.81□□□□□ -0.84
LINC00642-201ENST00000419459 CD28P10747 220 aa9.81□□□□□ -0.84
LINC00642-201ENST00000419459 BMI1P35226 326 aa9.81□□□□□ -0.84
LINC00642-201ENST00000419459 PROK1P58294 105 aa9.81□□□□□ -0.84
LINC00642-201ENST00000419459 RPL24P83731 157 aaKnown RBP9.81□□□□□ -0.84
LINC00642-201ENST00000419459 PDE6HQ13956 83 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms