RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 CMC4P56277 68 aaPredicted RBP9.75□□□□□ -0.85
HLA-DMB-258ENST00000418107 RAB4BP61018 213 aa9.75□□□□□ -0.85
HLA-DMB-258ENST00000418107 MRPL54Q6P161 138 aaKnown RBP9.75□□□□□ -0.85
HLA-DMB-258ENST00000418107 NUP35Q8NFH5 326 aa9.75□□□□□ -0.85
HLA-DMB-258ENST00000418107 BORCS7Q96B45 105 aa9.75□□□□□ -0.85
HLA-DMB-258ENST00000418107 LYSTQ99698 3801 aa9.75□□□□□ -0.85
HLA-DMB-258ENST00000418107 TPPP3Q9BW30 176 aa9.75□□□□□ -0.85
HLA-DMB-258ENST00000418107 GFRA4Q9GZZ7 299 aa9.75□□□□□ -0.85
HLA-DMB-258ENST00000418107 SRD5A3Q9H8P0 318 aa9.75□□□□□ -0.85
HLA-DMB-258ENST00000418107 MAP6D1Q9H9H5 199 aa9.75□□□□□ -0.85
HLA-DMB-258ENST00000418107 ZNF256Q9Y2P7 627 aaPredicted RBP9.75□□□□□ -0.85
HLA-DMB-258ENST00000418107 TRAV21A0A0B4J279 112 aa9.75□□□□□ -0.85
HLA-DMB-258ENST00000418107 OR11H12B2RN74 326 aa9.75□□□□□ -0.85
HLA-DMB-258ENST00000418107 IGLV1-51P01701 117 aa9.75□□□□□ -0.85
HLA-DMB-258ENST00000418107 ZFAND2AQ8N6M9 145 aa9.75□□□□□ -0.85
HLA-DMB-258ENST00000418107 RCHY1Q96PM5 261 aa9.75□□□□□ -0.85
HLA-DMB-258ENST00000418107 NAGKQ9UJ70 344 aa9.75□□□□□ -0.85
HLA-DMB-258ENST00000418107 FAM231BA6NCW3 169 aa9.74□□□□□ -0.85
HLA-DMB-258ENST00000418107 TYMSP04818 313 aa9.74□□□□□ -0.85
HLA-DMB-258ENST00000418107 APRG1Q8IVJ8 170 aa9.74□□□□□ -0.85
HLA-DMB-258ENST00000418107 SBSPONQ8IVN8 264 aa9.74□□□□□ -0.85
HLA-DMB-258ENST00000418107 ZFP82Q8N141 532 aa9.74□□□□□ -0.85
HLA-DMB-258ENST00000418107 FRZBQ92765 325 aa9.74□□□□□ -0.85
HLA-DMB-258ENST00000418107 ODF3Q96PU9 254 aa9.74□□□□□ -0.85
HLA-DMB-258ENST00000418107 TRAPPC1Q9Y5R8 145 aa9.74□□□□□ -0.85
HLA-DMB-258ENST00000418107 LCE6AA0A183 80 aa9.73□□□□□ -0.85
HLA-DMB-258ENST00000418107 GRIFINA4D1Z8 144 aa9.73□□□□□ -0.85
HLA-DMB-258ENST00000418107 TRGC2P03986 189 aa9.73□□□□□ -0.85
HLA-DMB-258ENST00000418107 HLA-DRB4P13762 266 aa9.73□□□□□ -0.85
HLA-DMB-258ENST00000418107 CRISP2P16562 243 aa9.73□□□□□ -0.85
HLA-DMB-258ENST00000418107 COX19Q49B96 90 aa9.73□□□□□ -0.85
HLA-DMB-258ENST00000418107 PRR9Q5T870 116 aa9.73□□□□□ -0.85
HLA-DMB-258ENST00000418107 WDR73Q6P4I2 378 aa9.73□□□□□ -0.85
HLA-DMB-258ENST00000418107 GTSF1Q8WW33 167 aa9.73□□□□□ -0.85
HLA-DMB-258ENST00000418107 FAM19A4Q96LR4 140 aa9.73□□□□□ -0.85
HLA-DMB-258ENST00000418107 HLA-DRB4X5D2U9 266 aa9.73□□□□□ -0.85
HLA-DMB-258ENST00000418107 CAMPP49913 170 aa9.72□□□□□ -0.85
HLA-DMB-258ENST00000418107 INSL3P51460 131 aa9.72□□□□□ -0.85
HLA-DMB-258ENST00000418107 RIGQ13278 110 aa9.72□□□□□ -0.85
HLA-DMB-258ENST00000418107 ZNF124Q15973 351 aa9.72□□□□□ -0.85
HLA-DMB-258ENST00000418107 LINC01559Q495D7 138 aa9.72□□□□□ -0.85
HLA-DMB-258ENST00000418107 Q6AWC8 147 aa9.72□□□□□ -0.85
HLA-DMB-258ENST00000418107 HYDINQ4G0P3 5121 aa9.71□□□□□ -0.85
HLA-DMB-258ENST00000418107 TRAV12-3A0A0B4J271 114 aa9.71□□□□□ -0.86
HLA-DMB-258ENST00000418107 A0A1B0GUT8 65 aa9.71□□□□□ -0.86
HLA-DMB-258ENST00000418107 C7orf71A4D174 169 aa9.71□□□□□ -0.86
HLA-DMB-258ENST00000418107 SNURFLB1AK76 121 aa9.71□□□□□ -0.86
HLA-DMB-258ENST00000418107 H3BMM0 161 aa9.71□□□□□ -0.86
HLA-DMB-258ENST00000418107 M0R2Z0 102 aa9.71□□□□□ -0.86
HLA-DMB-258ENST00000418107 CDKN1BP46527 198 aa9.71□□□□□ -0.86
HLA-DMB-258ENST00000418107 FXYD7P58549 80 aa9.71□□□□□ -0.86
HLA-DMB-258ENST00000418107 SSTP61278 116 aa9.71□□□□□ -0.86
HLA-DMB-258ENST00000418107 FABP9Q0Z7S8 132 aa9.71□□□□□ -0.86
HLA-DMB-258ENST00000418107 SPINK13Q1W4C9 94 aa9.71□□□□□ -0.86
HLA-DMB-258ENST00000418107 LYZL1Q6UWQ5 148 aa9.71□□□□□ -0.86
HLA-DMB-258ENST00000418107 ATP5L2Q7Z4Y8 100 aa9.71□□□□□ -0.86
HLA-DMB-258ENST00000418107 STHQ8IWL8 128 aa9.71□□□□□ -0.86
HLA-DMB-258ENST00000418107 FER1L6-AS1Q8NA97 138 aa9.71□□□□□ -0.86
HLA-DMB-258ENST00000418107 KLLNB2CW77 178 aa9.7□□□□□ -0.86
HLA-DMB-258ENST00000418107 S100A6P06703 90 aa9.7□□□□□ -0.86
HLA-DMB-258ENST00000418107 HBBP68871 147 aa9.7□□□□□ -0.86
HLA-DMB-258ENST00000418107 KIR3DS1Q14943 382 aa9.7□□□□□ -0.86
HLA-DMB-258ENST00000418107 ODF3L2Q3SX64 289 aa9.7□□□□□ -0.86
HLA-DMB-258ENST00000418107 MUC21Q5SSG8 566 aa9.7□□□□□ -0.86
HLA-DMB-258ENST00000418107 ZFAND6Q6FIF0 208 aa9.7□□□□□ -0.86
HLA-DMB-258ENST00000418107 RASL11AQ6T310 242 aa9.7□□□□□ -0.86
HLA-DMB-258ENST00000418107 GNB1LQ9BYB4 327 aa9.7□□□□□ -0.86
HLA-DMB-258ENST00000418107 C11orf21Q9P2W6 132 aa9.7□□□□□ -0.86
HLA-DMB-258ENST00000418107 TIMM8BQ9Y5J9 83 aaPredicted RBP9.7□□□□□ -0.86
HLA-DMB-258ENST00000418107 CSMD3Q7Z407 3707 aa9.69□□□□□ -0.86
HLA-DMB-258ENST00000418107 TRAV12-2A0A075B6T6 113 aa9.69□□□□□ -0.86
HLA-DMB-258ENST00000418107 IGKV3D-20A0A0C4DH25 116 aa9.69□□□□□ -0.86
HLA-DMB-258ENST00000418107 HLA-DQA1P01909 254 aa9.69□□□□□ -0.86
HLA-DMB-258ENST00000418107 MT-ND6P03923 174 aa9.69□□□□□ -0.86
HLA-DMB-258ENST00000418107 S100A8P05109 93 aa9.69□□□□□ -0.86
HLA-DMB-258ENST00000418107 S100A4P26447 101 aaKnown RBP9.69□□□□□ -0.86
HLA-DMB-258ENST00000418107 FOXA3P55318 350 aaPredicted RBP9.69□□□□□ -0.86
HLA-DMB-258ENST00000418107 FAM159AQ6UWV7 190 aa9.69□□□□□ -0.86
HLA-DMB-258ENST00000418107 Q6ZQT7 251 aa9.69□□□□□ -0.86
HLA-DMB-258ENST00000418107 MRPL18Q9H0U6 180 aaKnown RBP9.69□□□□□ -0.86
HLA-DMB-258ENST00000418107 ARMS2P0C7Q2 107 aa9.68□□□□□ -0.86
HLA-DMB-258ENST00000418107 FRMD6-AS1P0C7T7 363 aa9.68□□□□□ -0.86
HLA-DMB-258ENST00000418107 ANXA2RQ3ZCQ2 193 aa9.68□□□□□ -0.86
HLA-DMB-258ENST00000418107 GFI1BQ5VTD9 330 aa9.68□□□□□ -0.86
HLA-DMB-258ENST00000418107 AMTNQ6UX39 209 aa9.68□□□□□ -0.86
HLA-DMB-258ENST00000418107 KCNS1Q96KK3 526 aa9.68□□□□□ -0.86
HLA-DMB-258ENST00000418107 MUC21A0A0G2JKD1 596 aa9.67□□□□□ -0.86
HLA-DMB-258ENST00000418107 MUC21A0A140T8X8 626 aa9.67□□□□□ -0.86
HLA-DMB-258ENST00000418107 A0A1B0GW15 77 aa9.67□□□□□ -0.86
HLA-DMB-258ENST00000418107 F2Z2F3 143 aa9.67□□□□□ -0.86
HLA-DMB-258ENST00000418107 APCSP02743 223 aa9.67□□□□□ -0.86
HLA-DMB-258ENST00000418107 CD7P09564 240 aa9.67□□□□□ -0.86
HLA-DMB-258ENST00000418107 TRGC1P0CF51 173 aa9.67□□□□□ -0.86
HLA-DMB-258ENST00000418107 ASIPP42127 132 aa9.67□□□□□ -0.86
HLA-DMB-258ENST00000418107 TMEM136Q6ZRR5 245 aa9.67□□□□□ -0.86
HLA-DMB-258ENST00000418107 GTSCR1Q86UQ5 136 aa9.67□□□□□ -0.86
HLA-DMB-258ENST00000418107 ZMAT4Q9H898 229 aa9.67□□□□□ -0.86
HLA-DMB-258ENST00000418107 PLECQ15149 4684 aaKnown RBP9.66□□□□□ -0.86
HLA-DMB-258ENST00000418107 A8MTW9 85 aa9.66□□□□□ -0.86
HLA-DMB-258ENST00000418107 IGLC6P0CF74 106 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms