RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 IGHV4-4A0A075B6R2 117 aa12.54□□□□□ -0.4
SSBP3-205ENST00000417664 CACNG7P62955 275 aa12.54□□□□□ -0.4
SSBP3-205ENST00000417664 DEFB114Q30KQ6 69 aa12.54□□□□□ -0.4
SSBP3-205ENST00000417664 SAMD10Q9BYL1 202 aa12.54□□□□□ -0.4
SSBP3-205ENST00000417664 RNASE4P34096 147 aaKnown RBP12.54□□□□□ -0.4
SSBP3-205ENST00000417664 JOSD1Q15040 202 aaPredicted RBP12.54□□□□□ -0.4
SSBP3-205ENST00000417664 SPAG8Q99932 426 aaPredicted RBP12.54□□□□□ -0.4
SSBP3-205ENST00000417664 INAFM1C9JVW0 142 aa12.53□□□□□ -0.4
SSBP3-205ENST00000417664 TMEM61Q8N0U2 210 aa12.53□□□□□ -0.4
SSBP3-205ENST00000417664 C11orf44Q8N8P7 122 aa12.53□□□□□ -0.4
SSBP3-205ENST00000417664 RCHY1Q96PM5 261 aa12.53□□□□□ -0.4
SSBP3-205ENST00000417664 OTOGQ6ZRI0 2925 aa12.53□□□□□ -0.4
SSBP3-205ENST00000417664 A0A1W2PRX2 142 aa12.52□□□□□ -0.4
SSBP3-205ENST00000417664 OR4C46A6NHA9 309 aa12.52□□□□□ -0.4
SSBP3-205ENST00000417664 ZNF324O75467 553 aaPredicted RBP12.52□□□□□ -0.4
SSBP3-205ENST00000417664 CHCHD1Q96BP2 118 aaKnown RBP12.52□□□□□ -0.4
SSBP3-205ENST00000417664 NIT2Q9NQR4 276 aa12.52□□□□□ -0.4
SSBP3-205ENST00000417664 C7orf71A4D174 169 aa12.51□□□□□ -0.41
SSBP3-205ENST00000417664 J3KRW8 73 aa12.51□□□□□ -0.41
SSBP3-205ENST00000417664 ASIPP42127 132 aa12.51□□□□□ -0.41
SSBP3-205ENST00000417664 SMIM15Q7Z3B0 74 aa12.51□□□□□ -0.41
SSBP3-205ENST00000417664 U3KQK5 164 aa12.51□□□□□ -0.41
SSBP3-205ENST00000417664 A8MTW9 85 aa12.51□□□□□ -0.41
SSBP3-205ENST00000417664 PPBPP02775 128 aa12.51□□□□□ -0.41
SSBP3-205ENST00000417664 CD33P20138 364 aa12.51□□□□□ -0.41
SSBP3-205ENST00000417664 CDKN1BP46527 198 aa12.51□□□□□ -0.41
SSBP3-205ENST00000417664 IQCJQ1A5X6 159 aa12.51□□□□□ -0.41
SSBP3-205ENST00000417664 ANXA2RQ3ZCQ2 193 aa12.51□□□□□ -0.41
SSBP3-205ENST00000417664 ORMDL3Q8N138 153 aa12.51□□□□□ -0.41
SSBP3-205ENST00000417664 NAGKQ9UJ70 344 aa12.51□□□□□ -0.41
SSBP3-205ENST00000417664 HSBP1O75506 76 aa12.5□□□□□ -0.41
SSBP3-205ENST00000417664 S100A4P26447 101 aaKnown RBP12.5□□□□□ -0.41
SSBP3-205ENST00000417664 AMTP48728 403 aa12.5□□□□□ -0.41
SSBP3-205ENST00000417664 TDRG1Q3Y452 100 aa12.5□□□□□ -0.41
SSBP3-205ENST00000417664 FAM159AQ6UWV7 190 aa12.5□□□□□ -0.41
SSBP3-205ENST00000417664 AMN1Q8IY45 258 aa12.5□□□□□ -0.41
SSBP3-205ENST00000417664 NF1P21359 2839 aa12.49□□□□□ -0.41
SSBP3-205ENST00000417664 MUC21A0A0G2JKD1 596 aa12.49□□□□□ -0.41
SSBP3-205ENST00000417664 MUC21A0A140T8X8 626 aa12.49□□□□□ -0.41
SSBP3-205ENST00000417664 HLA-DRB4P13762 266 aa12.49□□□□□ -0.41
SSBP3-205ENST00000417664 DEFB131AP59861 70 aa12.49□□□□□ -0.41
SSBP3-205ENST00000417664 CD300EQ496F6 205 aaPredicted RBP12.49□□□□□ -0.41
SSBP3-205ENST00000417664 MUC21Q5SSG8 566 aa12.49□□□□□ -0.41
SSBP3-205ENST00000417664 SPANXN1Q5VSR9 72 aa12.49□□□□□ -0.41
SSBP3-205ENST00000417664 Q6ZQT7 251 aa12.49□□□□□ -0.41
SSBP3-205ENST00000417664 NIT1Q86X76 327 aa12.49□□□□□ -0.41
SSBP3-205ENST00000417664 NDUFA11Q86Y39 141 aa12.49□□□□□ -0.41
SSBP3-205ENST00000417664 HLA-DRB4X5D2U9 266 aa12.49□□□□□ -0.41
SSBP3-205ENST00000417664 CRLF1O75462 422 aa12.48□□□□□ -0.41
SSBP3-205ENST00000417664 LINC00614P0C842 121 aa12.48□□□□□ -0.41
SSBP3-205ENST00000417664 PMCHP20382 165 aa12.48□□□□□ -0.41
SSBP3-205ENST00000417664 MRPL51Q4U2R6 128 aaKnown RBP12.48□□□□□ -0.41
SSBP3-205ENST00000417664 OR10AG1Q8NH19 301 aa12.48□□□□□ -0.41
SSBP3-205ENST00000417664 SCRT2Q9NQ03 307 aa12.48□□□□□ -0.41
SSBP3-205ENST00000417664 LAMTOR2Q9Y2Q5 125 aa12.48□□□□□ -0.41
SSBP3-205ENST00000417664 H3BVH4 76 aa12.48□□□□□ -0.41
SSBP3-205ENST00000417664 SSTP61278 116 aa12.48□□□□□ -0.41
SSBP3-205ENST00000417664 KIR3DS1Q14943 382 aa12.48□□□□□ -0.41
SSBP3-205ENST00000417664 AMTNQ6UX39 209 aa12.48□□□□□ -0.41
SSBP3-205ENST00000417664 MSRB1Q9NZV6 116 aa12.48□□□□□ -0.41
SSBP3-205ENST00000417664 ADARB2-AS1A8MUL3 147 aa12.47□□□□□ -0.41
SSBP3-205ENST00000417664 D6R8Y8 96 aa12.47□□□□□ -0.41
SSBP3-205ENST00000417664 RAB4AP20338 218 aa12.47□□□□□ -0.41
SSBP3-205ENST00000417664 RNASEKQ6P5S7 137 aaKnown RBP12.47□□□□□ -0.41
SSBP3-205ENST00000417664 PRELID3AQ96N28 172 aa12.47□□□□□ -0.41
SSBP3-205ENST00000417664 CLUHP3Q96NS8 147 aa12.47□□□□□ -0.41
SSBP3-205ENST00000417664 ZNF256Q9Y2P7 627 aaPredicted RBP12.47□□□□□ -0.41
SSBP3-205ENST00000417664 H3BMM0 161 aa12.46□□□□□ -0.41
SSBP3-205ENST00000417664 CKS2P33552 79 aa12.46□□□□□ -0.41
SSBP3-205ENST00000417664 CMC4P56277 68 aaPredicted RBP12.46□□□□□ -0.41
SSBP3-205ENST00000417664 S100A12P80511 92 aa12.46□□□□□ -0.41
SSBP3-205ENST00000417664 PRR31Q5SQ13 230 aa12.46□□□□□ -0.41
SSBP3-205ENST00000417664 HIST2H2BDQ6DRA6 164 aa12.46□□□□□ -0.41
SSBP3-205ENST00000417664 MAP6D1Q9H9H5 199 aa12.46□□□□□ -0.41
SSBP3-205ENST00000417664 PHLDA3Q9Y5J5 127 aa12.46□□□□□ -0.41
SSBP3-205ENST00000417664 TRAV12-3A0A0B4J271 114 aa12.45□□□□□ -0.42
SSBP3-205ENST00000417664 Q6ZWC4 215 aa12.45□□□□□ -0.42
SSBP3-205ENST00000417664 OR2K2Q8NGT1 345 aa12.45□□□□□ -0.42
SSBP3-205ENST00000417664 RNF185Q96GF1 192 aa12.45□□□□□ -0.42
SSBP3-205ENST00000417664 URB1-AS1Q96HZ7 61 aa12.45□□□□□ -0.42
SSBP3-205ENST00000417664 CUBNO60494 3623 aa12.44□□□□□ -0.42
SSBP3-205ENST00000417664 M0R2Z0 102 aa12.44□□□□□ -0.42
SSBP3-205ENST00000417664 GNRH2O43555 120 aa12.44□□□□□ -0.42
SSBP3-205ENST00000417664 IGKV3-20P01619 116 aa12.44□□□□□ -0.42
SSBP3-205ENST00000417664 RNASE3P12724 160 aaKnown RBP12.44□□□□□ -0.42
SSBP3-205ENST00000417664 SPINK13Q1W4C9 94 aa12.44□□□□□ -0.42
SSBP3-205ENST00000417664 NXPH4O95158 308 aa12.43□□□□□ -0.42
SSBP3-205ENST00000417664 FAM19A2Q8N3H0 131 aa12.43□□□□□ -0.42
SSBP3-205ENST00000417664 PRSS3P2Q8NHM4 247 aa12.43□□□□□ -0.42
SSBP3-205ENST00000417664 AP5S1Q9NUS5 200 aa12.43□□□□□ -0.42
SSBP3-205ENST00000417664 IGHV1OR15-1A0A075B7D0 117 aa12.42□□□□□ -0.42
SSBP3-205ENST00000417664 KNCNA6PVL3 124 aa12.42□□□□□ -0.42
SSBP3-205ENST00000417664 EVI2AP22794 236 aa12.42□□□□□ -0.42
SSBP3-205ENST00000417664 NSUN5P1Q3KNT7 163 aa12.42□□□□□ -0.42
SSBP3-205ENST00000417664 FA2HQ7L5A8 372 aa12.42□□□□□ -0.42
SSBP3-205ENST00000417664 SCGB1D1O95968 90 aa12.42□□□□□ -0.42
SSBP3-205ENST00000417664 CD7P09564 240 aa12.42□□□□□ -0.42
SSBP3-205ENST00000417664 MRAP2Q96G30 205 aa12.42□□□□□ -0.42
SSBP3-205ENST00000417664 FAM110AQ9BQ89 295 aa12.42□□□□□ -0.42
SSBP3-205ENST00000417664 SORL1Q92673 2214 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms