RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 LINC00322Q6ZN03 302 aaPredicted RBP15.92■□□□□ 0.14
AP1S3-205ENST00000415298 V9GYY9 64 aa15.92■□□□□ 0.14
AP1S3-205ENST00000415298 VPS13CQ709C8 3753 aa15.92■□□□□ 0.14
AP1S3-205ENST00000415298 COX6B1P14854 86 aa15.92■□□□□ 0.14
AP1S3-205ENST00000415298 AAMDCQ9H7C9 122 aa15.92■□□□□ 0.14
AP1S3-205ENST00000415298 WNT9BO14905 357 aa15.91■□□□□ 0.14
AP1S3-205ENST00000415298 LY6HO94772 140 aa15.91■□□□□ 0.14
AP1S3-205ENST00000415298 SRSF9Q13242 221 aaKnown RBP eCLIP15.91■□□□□ 0.14
AP1S3-205ENST00000415298 ZNF329Q86UD4 541 aa15.91■□□□□ 0.14
AP1S3-205ENST00000415298 NTN5Q8WTR8 489 aaPredicted RBP15.91■□□□□ 0.14
AP1S3-205ENST00000415298 RNF125Q96EQ8 232 aa15.91■□□□□ 0.14
AP1S3-205ENST00000415298 RPL13AP40429 203 aaKnown RBP15.91■□□□□ 0.14
AP1S3-205ENST00000415298 TWIST1Q15672 202 aa15.91■□□□□ 0.14
AP1S3-205ENST00000415298 FAM201AQ5SY85 155 aa15.91■□□□□ 0.14
AP1S3-205ENST00000415298 PSMG3-AS1Q96PY0 264 aa15.91■□□□□ 0.14
AP1S3-205ENST00000415298 IMUPQ9GZP8 106 aa15.91■□□□□ 0.14
AP1S3-205ENST00000415298 A0A1B0GUT8 65 aa15.9■□□□□ 0.14
AP1S3-205ENST00000415298 CRYGAP11844 174 aa15.9■□□□□ 0.14
AP1S3-205ENST00000415298 RIGQ13278 110 aa15.9■□□□□ 0.14
AP1S3-205ENST00000415298 C11orf71Q6IPW1 123 aa15.9■□□□□ 0.14
AP1S3-205ENST00000415298 SLC25A48Q6ZT89 311 aaKnown RBP15.9■□□□□ 0.14
AP1S3-205ENST00000415298 MLST8Q9BVC4 326 aa15.9■□□□□ 0.14
AP1S3-205ENST00000415298 RAI1Q7Z5J4 1906 aaPredicted RBP15.9■□□□□ 0.14
AP1S3-205ENST00000415298 TRGV11A0A075B6L2 103 aa15.9■□□□□ 0.14
AP1S3-205ENST00000415298 IGHV3OR15-7A0A075B7D8 119 aa15.9■□□□□ 0.14
AP1S3-205ENST00000415298 J3QT63 122 aa15.9■□□□□ 0.14
AP1S3-205ENST00000415298 CNTFRP26992 372 aa15.9■□□□□ 0.14
AP1S3-205ENST00000415298 PMVKQ15126 192 aa15.9■□□□□ 0.14
AP1S3-205ENST00000415298 JPT2Q9H910 190 aa15.9■□□□□ 0.14
AP1S3-205ENST00000415298 OVOL1O14753 267 aa15.89■□□□□ 0.13
AP1S3-205ENST00000415298 UBE2L3P68036 154 aaKnown RBP15.89■□□□□ 0.13
AP1S3-205ENST00000415298 EBI3Q14213 229 aa15.89■□□□□ 0.13
AP1S3-205ENST00000415298 WFDC3Q8IUB2 231 aa15.89■□□□□ 0.13
AP1S3-205ENST00000415298 AMN1Q8IY45 258 aa15.89■□□□□ 0.13
AP1S3-205ENST00000415298 MKXQ8IYA7 352 aa15.89■□□□□ 0.13
AP1S3-205ENST00000415298 PTPN13Q12923 2485 aa15.89■□□□□ 0.13
AP1S3-205ENST00000415298 LYNX1G3V0Z9 82 aa15.89■□□□□ 0.13
AP1S3-205ENST00000415298 TFF1P04155 84 aa15.89■□□□□ 0.13
AP1S3-205ENST00000415298 LYNX1P0DP58 116 aa15.89■□□□□ 0.13
AP1S3-205ENST00000415298 RPL35AP18077 110 aaKnown RBP15.89■□□□□ 0.13
AP1S3-205ENST00000415298 POLQO75417 2590 aa15.88■□□□□ 0.13
AP1S3-205ENST00000415298 C17orf98A8MV24 154 aa15.88■□□□□ 0.13
AP1S3-205ENST00000415298 ATP5G1P05496 136 aa15.88■□□□□ 0.13
AP1S3-205ENST00000415298 EFNA4P52798 201 aa15.88■□□□□ 0.13
AP1S3-205ENST00000415298 ZNF56Q15929 161 aa15.88■□□□□ 0.13
AP1S3-205ENST00000415298 DTX2Q86UW9 622 aa15.88■□□□□ 0.13
AP1S3-205ENST00000415298 MYOZ3Q8TDC0 251 aa15.88■□□□□ 0.13
AP1S3-205ENST00000415298 CSMD1Q96PZ7 3565 aa15.87■□□□□ 0.13
AP1S3-205ENST00000415298 ABCA12Q86UK0 2595 aa15.87■□□□□ 0.13
AP1S3-205ENST00000415298 NCBP2LA6PVI3 153 aaKnown RBP15.87■□□□□ 0.13
AP1S3-205ENST00000415298 LGALS9O00182 355 aa15.87■□□□□ 0.13
AP1S3-205ENST00000415298 LGALS1P09382 135 aaKnown RBP15.87■□□□□ 0.13
AP1S3-205ENST00000415298 ENSAO43768 121 aaKnown RBP15.87■□□□□ 0.13
AP1S3-205ENST00000415298 BRWD1-AS2P59051 145 aa15.87■□□□□ 0.13
AP1S3-205ENST00000415298 ZNF415Q09FC8 603 aa15.87■□□□□ 0.13
AP1S3-205ENST00000415298 CCL17Q92583 94 aa15.87■□□□□ 0.13
AP1S3-205ENST00000415298 PRSS1P07477 247 aa15.86■□□□□ 0.13
AP1S3-205ENST00000415298 COX7CP15954 63 aa15.86■□□□□ 0.13
AP1S3-205ENST00000415298 LINC01559Q495D7 138 aa15.86■□□□□ 0.13
AP1S3-205ENST00000415298 U3KQK5 164 aa15.86■□□□□ 0.13
AP1S3-205ENST00000415298 OVOL3O00110 214 aa15.85■□□□□ 0.13
AP1S3-205ENST00000415298 KRTAP10-9P60411 292 aa15.85■□□□□ 0.13
AP1S3-205ENST00000415298 MRPL20Q9BYC9 149 aaKnown RBP15.85■□□□□ 0.13
AP1S3-205ENST00000415298 MAP1AP78559 2803 aaPredicted RBP15.85■□□□□ 0.13
AP1S3-205ENST00000415298 D6R8Y8 96 aa15.85■□□□□ 0.13
AP1S3-205ENST00000415298 OXTP01178 125 aa15.85■□□□□ 0.13
AP1S3-205ENST00000415298 TMEM258P61165 79 aa15.85■□□□□ 0.13
AP1S3-205ENST00000415298 EIF4EBP1Q13541 118 aaPredicted RBP15.85■□□□□ 0.13
AP1S3-205ENST00000415298 LINC01600Q96MT4 127 aa15.85■□□□□ 0.13
AP1S3-205ENST00000415298 FAM240AA0A1B0GVK7 77 aa15.84■□□□□ 0.13
AP1S3-205ENST00000415298 LHBP01229 141 aa15.84■□□□□ 0.13
AP1S3-205ENST00000415298 ARMS2P0C7Q2 107 aa15.83■□□□□ 0.12
AP1S3-205ENST00000415298 CEMP1Q6PRD7 247 aaPredicted RBP15.83■□□□□ 0.12
AP1S3-205ENST00000415298 DEFB108BQ8NET1 73 aa15.83■□□□□ 0.12
AP1S3-205ENST00000415298 FAM167A-AS1Q96KT0 104 aa15.83■□□□□ 0.12
AP1S3-205ENST00000415298 SRRM5B3KS81 715 aa15.83■□□□□ 0.12
AP1S3-205ENST00000415298 TRACP01848 142 aa15.83■□□□□ 0.12
AP1S3-205ENST00000415298 LINC00596Q86U02 117 aa15.83■□□□□ 0.12
AP1S3-205ENST00000415298 ORMDL3Q8N138 153 aa15.82■□□□□ 0.12
AP1S3-205ENST00000415298 RNF7Q9UBF6 113 aa15.82■□□□□ 0.12
AP1S3-205ENST00000415298 PKIGQ9Y2B9 76 aa15.82■□□□□ 0.12
AP1S3-205ENST00000415298 TEX49A0A1B0GTD5 131 aa15.82■□□□□ 0.12
AP1S3-205ENST00000415298 FOXC2Q99958 501 aa15.82■□□□□ 0.12
AP1S3-205ENST00000415298 NDUFA11Q86Y39 141 aa15.81■□□□□ 0.12
AP1S3-205ENST00000415298 TMEM86BQ8N661 226 aa15.81■□□□□ 0.12
AP1S3-205ENST00000415298 LINC00527Q9UJ94 153 aa15.81■□□□□ 0.12
AP1S3-205ENST00000415298 METRNQ9UJH8 293 aa15.81■□□□□ 0.12
AP1S3-205ENST00000415298 APCP25054 2843 aa15.81■□□□□ 0.12
AP1S3-205ENST00000415298 HECTD1Q9ULT8 2610 aa15.81■□□□□ 0.12
AP1S3-205ENST00000415298 TRAV40A0A0B4J280 105 aa15.81■□□□□ 0.12
AP1S3-205ENST00000415298 PYGO1Q9Y3Y4 419 aa15.81■□□□□ 0.12
AP1S3-205ENST00000415298 FOXA2Q9Y261 457 aaPredicted RBP15.8■□□□□ 0.12
AP1S3-205ENST00000415298 DUTP33316 252 aaKnown RBP15.79■□□□□ 0.12
AP1S3-205ENST00000415298 CRIP2P52943 208 aaPredicted RBP15.79■□□□□ 0.12
AP1S3-205ENST00000415298 H3BMM0 161 aa15.79■□□□□ 0.12
AP1S3-205ENST00000415298 TMEM178BH3BS89 294 aa15.79■□□□□ 0.12
AP1S3-205ENST00000415298 Q8IYB0 196 aa15.79■□□□□ 0.12
AP1S3-205ENST00000415298 UBALD1Q8TB05 177 aa15.79■□□□□ 0.12
AP1S3-205ENST00000415298 UBE2WQ96B02 151 aa15.79■□□□□ 0.12
AP1S3-205ENST00000415298 MRPS12O15235 138 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms