RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 NMES1Q9C002 83 aa12.97□□□□□ -0.33
UBXN4-202ENST00000415164 TRAV8-6A0A0B4J262 113 aa12.96□□□□□ -0.33
UBXN4-202ENST00000415164 SH2D6Q7Z4S9 175 aa12.96□□□□□ -0.33
UBXN4-202ENST00000415164 TMEM70Q9BUB7 260 aa12.96□□□□□ -0.33
UBXN4-202ENST00000415164 SRRM2Q9UQ35 2752 aaKnown RBP12.95□□□□□ -0.34
UBXN4-202ENST00000415164 LRCOL1A6NCL2 159 aa12.95□□□□□ -0.34
UBXN4-202ENST00000415164 PGPA6NDG6 321 aa12.95□□□□□ -0.34
UBXN4-202ENST00000415164 TYMSP04818 313 aa12.95□□□□□ -0.34
UBXN4-202ENST00000415164 TAS2R45P59539 299 aa12.95□□□□□ -0.34
UBXN4-202ENST00000415164 MZT2BQ6NZ67 158 aa12.95□□□□□ -0.34
UBXN4-202ENST00000415164 GOLT1AQ6ZVE7 132 aa12.95□□□□□ -0.34
UBXN4-202ENST00000415164 Q8N814 137 aa12.95□□□□□ -0.34
UBXN4-202ENST00000415164 SDF2L1Q9HCN8 221 aa12.95□□□□□ -0.34
UBXN4-202ENST00000415164 LENEPQ9Y5L5 61 aa12.95□□□□□ -0.34
UBXN4-202ENST00000415164 IGHV3-73A0A0B4J1V6 119 aa12.94□□□□□ -0.34
UBXN4-202ENST00000415164 TRAV21A0A0B4J279 112 aa12.94□□□□□ -0.34
UBXN4-202ENST00000415164 FBLL1A6NHQ2 334 aaKnown RBP12.94□□□□□ -0.34
UBXN4-202ENST00000415164 GATA1P15976 413 aaPredicted RBP12.94□□□□□ -0.34
UBXN4-202ENST00000415164 LINC01556Q5JQF7 62 aa12.94□□□□□ -0.34
UBXN4-202ENST00000415164 FAM74A1Q5RGS3 127 aa12.94□□□□□ -0.34
UBXN4-202ENST00000415164 ATP5SQ99766 215 aa12.94□□□□□ -0.34
UBXN4-202ENST00000415164 SMIM3Q9BZL3 60 aa12.94□□□□□ -0.34
UBXN4-202ENST00000415164 OTORQ9NRC9 128 aa12.94□□□□□ -0.34
UBXN4-202ENST00000415164 IBA57-AS1B1ANH7 110 aa12.93□□□□□ -0.34
UBXN4-202ENST00000415164 H0YIZ8 118 aa12.93□□□□□ -0.34
UBXN4-202ENST00000415164 SCGB1C1Q8TD33 95 aa12.93□□□□□ -0.34
UBXN4-202ENST00000415164 PRADC1Q9BSG0 188 aa12.93□□□□□ -0.34
UBXN4-202ENST00000415164 CCDC32Q9BV29 185 aa12.93□□□□□ -0.34
UBXN4-202ENST00000415164 TREM1Q9NP99 234 aa12.93□□□□□ -0.34
UBXN4-202ENST00000415164 TRAV8-1A0A0A6YYK1 113 aa12.92□□□□□ -0.34
UBXN4-202ENST00000415164 PFN1P07737 140 aaKnown RBP12.92□□□□□ -0.34
UBXN4-202ENST00000415164 TDRG1Q3Y452 100 aa12.92□□□□□ -0.34
UBXN4-202ENST00000415164 ASB13Q8WXK3 278 aa12.92□□□□□ -0.34
UBXN4-202ENST00000415164 FAM30AQ9NZY2 134 aa12.92□□□□□ -0.34
UBXN4-202ENST00000415164 MBD2Q9UBB5 411 aa12.92□□□□□ -0.34
UBXN4-202ENST00000415164 GNG5P63218 68 aa12.91□□□□□ -0.34
UBXN4-202ENST00000415164 ZNF876PQ49A33 203 aa12.91□□□□□ -0.34
UBXN4-202ENST00000415164 SLC25A29Q8N8R3 303 aa12.91□□□□□ -0.34
UBXN4-202ENST00000415164 ENKURQ8TC29 256 aa12.91□□□□□ -0.34
UBXN4-202ENST00000415164 TMED6Q8WW62 240 aa12.91□□□□□ -0.34
UBXN4-202ENST00000415164 KCNS1Q96KK3 526 aa12.91□□□□□ -0.34
UBXN4-202ENST00000415164 SGK494Q96LW2 274 aa12.91□□□□□ -0.34
UBXN4-202ENST00000415164 TIRAPP58753 221 aa12.9□□□□□ -0.34
UBXN4-202ENST00000415164 RHOHQ15669 191 aa12.9□□□□□ -0.34
UBXN4-202ENST00000415164 A0A1W2PPV4 95 aa12.89□□□□□ -0.35
UBXN4-202ENST00000415164 TVP23CQ96ET8 276 aa12.89□□□□□ -0.35
UBXN4-202ENST00000415164 LECT2O14960 151 aa12.88□□□□□ -0.35
UBXN4-202ENST00000415164 HMGB3O15347 200 aaKnown RBP12.88□□□□□ -0.35
UBXN4-202ENST00000415164 CYCSP99999 105 aaKnown RBP12.88□□□□□ -0.35
UBXN4-202ENST00000415164 LELP1Q5T871 98 aa12.88□□□□□ -0.35
UBXN4-202ENST00000415164 CFAP126Q5VTH2 177 aa12.88□□□□□ -0.35
UBXN4-202ENST00000415164 NDFIP1Q9BT67 221 aa12.88□□□□□ -0.35
UBXN4-202ENST00000415164 HSPB11Q9Y547 144 aa12.88□□□□□ -0.35
UBXN4-202ENST00000415164 PLA2G1BP04054 148 aaKnown RBP12.87□□□□□ -0.35
UBXN4-202ENST00000415164 DPPA3Q6W0C5 159 aa12.87□□□□□ -0.35
UBXN4-202ENST00000415164 PPP1R1CQ8WVI7 109 aa12.87□□□□□ -0.35
UBXN4-202ENST00000415164 TM2D2Q9BX73 214 aa12.87□□□□□ -0.35
UBXN4-202ENST00000415164 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.86□□□□□ -0.35
UBXN4-202ENST00000415164 RS1O15537 224 aa12.86□□□□□ -0.35
UBXN4-202ENST00000415164 ASAH1Q13510 395 aa12.86□□□□□ -0.35
UBXN4-202ENST00000415164 ACOT6Q3I5F7 207 aaPredicted RBP12.86□□□□□ -0.35
UBXN4-202ENST00000415164 LINC00528Q8N1L1 170 aa12.86□□□□□ -0.35
UBXN4-202ENST00000415164 ATP6V0E2Q8NHE4 81 aa12.86□□□□□ -0.35
UBXN4-202ENST00000415164 BOLA1Q9Y3E2 137 aa12.86□□□□□ -0.35
UBXN4-202ENST00000415164 TRBV6-4A0A1B0GX49 114 aa12.85□□□□□ -0.35
UBXN4-202ENST00000415164 RAB2AP61019 212 aa12.85□□□□□ -0.35
UBXN4-202ENST00000415164 WFDC2Q14508 124 aa12.85□□□□□ -0.35
UBXN4-202ENST00000415164 Q8N3U1 123 aa12.85□□□□□ -0.35
UBXN4-202ENST00000415164 TMEM75Q8N9X5 138 aa12.85□□□□□ -0.35
UBXN4-202ENST00000415164 GTSF1LQ9H1H1 148 aa12.85□□□□□ -0.35
UBXN4-202ENST00000415164 PET100P0DJ07 73 aa12.84□□□□□ -0.35
UBXN4-202ENST00000415164 RPL12P30050 165 aaKnown RBP12.84□□□□□ -0.35
UBXN4-202ENST00000415164 PQLC2Q6ZP29 291 aa12.84□□□□□ -0.35
UBXN4-202ENST00000415164 GAGE12JA6NER3 117 aa12.83□□□□□ -0.36
UBXN4-202ENST00000415164 SSNA1O43805 119 aa12.83□□□□□ -0.36
UBXN4-202ENST00000415164 GCGP01275 180 aa12.83□□□□□ -0.36
UBXN4-202ENST00000415164 ZNF80P51504 273 aaPredicted RBP12.83□□□□□ -0.36
UBXN4-202ENST00000415164 H2BFSP57053 126 aa12.83□□□□□ -0.36
UBXN4-202ENST00000415164 GAGE1Q13065 139 aa12.83□□□□□ -0.36
UBXN4-202ENST00000415164 GAGE4Q13068 117 aa12.83□□□□□ -0.36
UBXN4-202ENST00000415164 GAGE5Q13069 117 aa12.83□□□□□ -0.36
UBXN4-202ENST00000415164 GAGE13Q4V321 117 aa12.83□□□□□ -0.36
UBXN4-202ENST00000415164 ZNF506Q5JVG8 444 aa12.83□□□□□ -0.36
UBXN4-202ENST00000415164 C11orf21Q9P2W6 132 aa12.83□□□□□ -0.36
UBXN4-202ENST00000415164 PGPEP1LA6NFU8 196 aa12.82□□□□□ -0.36
UBXN4-202ENST00000415164 INMT-MINDY4F8WBC2 141 aa12.82□□□□□ -0.36
UBXN4-202ENST00000415164 CIDEAO60543 219 aa12.82□□□□□ -0.36
UBXN4-202ENST00000415164 MPC2O95563 127 aa12.82□□□□□ -0.36
UBXN4-202ENST00000415164 OR10G9Q8NGN4 311 aa12.82□□□□□ -0.36
UBXN4-202ENST00000415164 OR10G7Q8NGN6 311 aa12.82□□□□□ -0.36
UBXN4-202ENST00000415164 TAAR5O14804 337 aa12.81□□□□□ -0.36
UBXN4-202ENST00000415164 ARL14EPLP0DKL9 152 aa12.81□□□□□ -0.36
UBXN4-202ENST00000415164 MGST1P10620 155 aaKnown RBP12.81□□□□□ -0.36
UBXN4-202ENST00000415164 LAGE3Q14657 143 aa12.81□□□□□ -0.36
UBXN4-202ENST00000415164 ZFP69Q49AA0 526 aa12.81□□□□□ -0.36
UBXN4-202ENST00000415164 LINC01620Q4KN68 170 aa12.81□□□□□ -0.36
UBXN4-202ENST00000415164 WFDC1Q9HC57 220 aa12.81□□□□□ -0.36
UBXN4-202ENST00000415164 NDUFA13Q9P0J0 144 aa12.81□□□□□ -0.36
UBXN4-202ENST00000415164 K7EQM0 130 aa12.8□□□□□ -0.36
UBXN4-202ENST00000415164 C1QBP02746 253 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms