RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 MRPL36Q9P0J6 103 aaKnown RBP14.61□□□□□ -0.07
SHANK3-202ENST00000414786 VPREB3Q9UKI3 123 aa14.61□□□□□ -0.07
SHANK3-202ENST00000414786 A0A1B0GX51 115 aa14.61□□□□□ -0.07
SHANK3-202ENST00000414786 COX7A2LO14548 114 aa14.61□□□□□ -0.07
SHANK3-202ENST00000414786 NHSL1Q5SYE7 1610 aa14.6□□□□□ -0.07
SHANK3-202ENST00000414786 PRSS46E5RG02 174 aa14.6□□□□□ -0.07
SHANK3-202ENST00000414786 NMSQ5H8A3 153 aa14.6□□□□□ -0.07
SHANK3-202ENST00000414786 SRSF2Q01130 221 aaKnown RBP14.6□□□□□ -0.07
SHANK3-202ENST00000414786 COLCA2A8K830 154 aa14.6□□□□□ -0.07
SHANK3-202ENST00000414786 FAM110AQ9BQ89 295 aa14.6□□□□□ -0.07
SHANK3-202ENST00000414786 PNRC2Q9NPJ4 139 aaKnown RBP14.59□□□□□ -0.07
SHANK3-202ENST00000414786 ZC2HC1AQ96GY0 325 aa14.59□□□□□ -0.07
SHANK3-202ENST00000414786 NPYP01303 97 aa14.59□□□□□ -0.07
SHANK3-202ENST00000414786 MRPL23Q16540 153 aaKnown RBP14.59□□□□□ -0.07
SHANK3-202ENST00000414786 SPTSSBQ8NFR3 76 aa14.59□□□□□ -0.07
SHANK3-202ENST00000414786 OR11H6Q8NGC7 330 aa14.59□□□□□ -0.07
SHANK3-202ENST00000414786 IGLV2-18A0A075B6J9 118 aa14.59□□□□□ -0.07
SHANK3-202ENST00000414786 IGLV3-32A0A0A0MS00 114 aa14.59□□□□□ -0.07
SHANK3-202ENST00000414786 ETDBQ3ZM63 59 aa14.59□□□□□ -0.07
SHANK3-202ENST00000414786 TRPM7Q96QT4 1865 aa14.58□□□□□ -0.07
SHANK3-202ENST00000414786 DKK2Q9UBU2 259 aa14.58□□□□□ -0.07
SHANK3-202ENST00000414786 TRBV19A0A075B6N1 114 aa14.58□□□□□ -0.08
SHANK3-202ENST00000414786 J3QQQ9 107 aa14.58□□□□□ -0.08
SHANK3-202ENST00000414786 HELZP42694 1942 aaKnown RBP14.58□□□□□ -0.08
SHANK3-202ENST00000414786 J3QLI3 93 aa14.58□□□□□ -0.08
SHANK3-202ENST00000414786 MPLKIPQ8TAP9 179 aa14.58□□□□□ -0.08
SHANK3-202ENST00000414786 MPZP25189 248 aa14.58□□□□□ -0.08
SHANK3-202ENST00000414786 GATA1P15976 413 aaPredicted RBP14.58□□□□□ -0.08
SHANK3-202ENST00000414786 NREPQ16612 68 aa14.58□□□□□ -0.08
SHANK3-202ENST00000414786 LINC01559Q495D7 138 aa14.58□□□□□ -0.08
SHANK3-202ENST00000414786 ATP5G1P05496 136 aa14.57□□□□□ -0.08
SHANK3-202ENST00000414786 ZNF664Q8N3J9 261 aa14.57□□□□□ -0.08
SHANK3-202ENST00000414786 RPL39LQ96EH5 51 aaKnown RBP14.57□□□□□ -0.08
SHANK3-202ENST00000414786 PRO1854Q9UHT4 67 aa14.57□□□□□ -0.08
SHANK3-202ENST00000414786 UTF1Q5T230 341 aa14.57□□□□□ -0.08
SHANK3-202ENST00000414786 TMEM14EPQ6UXP3 125 aa14.57□□□□□ -0.08
SHANK3-202ENST00000414786 BLCAPP62952 87 aa14.57□□□□□ -0.08
SHANK3-202ENST00000414786 SLAQ13239 276 aa14.57□□□□□ -0.08
SHANK3-202ENST00000414786 SLC25A29Q8N8R3 303 aa14.57□□□□□ -0.08
SHANK3-202ENST00000414786 PRR25Q96S07 402 aa14.57□□□□□ -0.08
SHANK3-202ENST00000414786 HIGD2AQ9BW72 106 aa14.57□□□□□ -0.08
SHANK3-202ENST00000414786 TNS1Q9HBL0 1735 aaKnown RBP14.56□□□□□ -0.08
SHANK3-202ENST00000414786 CEND1Q8N111 149 aa14.56□□□□□ -0.08
SHANK3-202ENST00000414786 HHLA3Q9XRX5 114 aa14.56□□□□□ -0.08
SHANK3-202ENST00000414786 PRR20EP86478 221 aa14.56□□□□□ -0.08
SHANK3-202ENST00000414786 PRR20CP86479 221 aa14.56□□□□□ -0.08
SHANK3-202ENST00000414786 PRR20DP86480 221 aa14.56□□□□□ -0.08
SHANK3-202ENST00000414786 PRR20BP86481 221 aa14.56□□□□□ -0.08
SHANK3-202ENST00000414786 PRR20AP86496 221 aa14.56□□□□□ -0.08
SHANK3-202ENST00000414786 SIGLEC8Q9NYZ4 499 aa14.56□□□□□ -0.08
SHANK3-202ENST00000414786 LYPD3O95274 346 aa14.56□□□□□ -0.08
SHANK3-202ENST00000414786 MP68P56378 58 aa14.56□□□□□ -0.08
SHANK3-202ENST00000414786 PLXND1Q9Y4D7 1925 aa14.56□□□□□ -0.08
SHANK3-202ENST00000414786 NTN5Q8WTR8 489 aaPredicted RBP14.55□□□□□ -0.08
SHANK3-202ENST00000414786 DSCAML1Q8TD84 2053 aa14.55□□□□□ -0.08
SHANK3-202ENST00000414786 B3GALT5-AS1P59052 145 aa14.55□□□□□ -0.08
SHANK3-202ENST00000414786 WNK3Q9BYP7 1800 aa14.55□□□□□ -0.08
SHANK3-202ENST00000414786 COL4A6Q14031 1691 aa14.55□□□□□ -0.08
SHANK3-202ENST00000414786 K7EM74 188 aa14.55□□□□□ -0.08
SHANK3-202ENST00000414786 K7EQD1 137 aa14.55□□□□□ -0.08
SHANK3-202ENST00000414786 TRBV24-1A0A075B6N3 115 aa14.54□□□□□ -0.08
SHANK3-202ENST00000414786 FOXI1Q12951 378 aa14.54□□□□□ -0.08
SHANK3-202ENST00000414786 PYY3Q5JQD4 70 aa14.54□□□□□ -0.08
SHANK3-202ENST00000414786 UBR3Q6ZT12 1888 aa14.54□□□□□ -0.08
SHANK3-202ENST00000414786 IGHV4-61A0A0C4DH41 118 aa14.54□□□□□ -0.08
SHANK3-202ENST00000414786 C17orf58Q2M2W7 97 aa14.54□□□□□ -0.08
SHANK3-202ENST00000414786 IGHV4-30-4P0DP06 118 aa14.54□□□□□ -0.08
SHANK3-202ENST00000414786 IGHV4-31P0DP07 118 aa14.54□□□□□ -0.08
SHANK3-202ENST00000414786 WISP1O95388 367 aa14.54□□□□□ -0.08
SHANK3-202ENST00000414786 A0A087WZ39 114 aa14.54□□□□□ -0.08
SHANK3-202ENST00000414786 DEFB1P60022 68 aa14.54□□□□□ -0.08
SHANK3-202ENST00000414786 VOPP1Q96AW1 172 aa14.53□□□□□ -0.08
SHANK3-202ENST00000414786 PDE6HQ13956 83 aa14.53□□□□□ -0.08
SHANK3-202ENST00000414786 ZFP2Q6ZN57 461 aa14.53□□□□□ -0.08
SHANK3-202ENST00000414786 SMAD5-AS1Q9Y6J3 95 aa14.53□□□□□ -0.08
SHANK3-202ENST00000414786 LOXP28300 417 aaPredicted RBP14.53□□□□□ -0.08
SHANK3-202ENST00000414786 FOXI2Q6ZQN5 318 aa14.53□□□□□ -0.08
SHANK3-202ENST00000414786 NDUFA4L2Q9NRX3 87 aa14.53□□□□□ -0.08
SHANK3-202ENST00000414786 COL11A2P13942 1736 aaPredicted RBP14.53□□□□□ -0.08
SHANK3-202ENST00000414786 FAM231DQ6ZW35 169 aa14.53□□□□□ -0.08
SHANK3-202ENST00000414786 MLST8Q9BVC4 326 aa14.52□□□□□ -0.08
SHANK3-202ENST00000414786 RBAKDNA6NC62 111 aa14.52□□□□□ -0.08
SHANK3-202ENST00000414786 CYTL1Q9NRR1 136 aa14.52□□□□□ -0.08
SHANK3-202ENST00000414786 BRCA1P38398 1863 aaKnown RBP14.52□□□□□ -0.09
SHANK3-202ENST00000414786 LECT2O14960 151 aa14.52□□□□□ -0.09
SHANK3-202ENST00000414786 LTAP01374 205 aa14.52□□□□□ -0.09
SHANK3-202ENST00000414786 H3BRN7 92 aa14.51□□□□□ -0.09
SHANK3-202ENST00000414786 Q6ZR03 302 aa14.51□□□□□ -0.09
SHANK3-202ENST00000414786 SPINK6Q6UWN8 80 aa14.51□□□□□ -0.09
SHANK3-202ENST00000414786 C16orf74Q96GX8 76 aa14.51□□□□□ -0.09
SHANK3-202ENST00000414786 B9D2Q9BPU9 175 aa14.51□□□□□ -0.09
SHANK3-202ENST00000414786 SS18L2Q9UHA2 77 aa14.51□□□□□ -0.09
SHANK3-202ENST00000414786 TNRC6BQ9UPQ9 1833 aaKnown RBP14.5□□□□□ -0.09
SHANK3-202ENST00000414786 ZNF833PQ6ZTB9 187 aa14.5□□□□□ -0.09
SHANK3-202ENST00000414786 IGLC2P0DOY2 106 aa14.5□□□□□ -0.09
SHANK3-202ENST00000414786 IGLC3P0DOY3 106 aa14.5□□□□□ -0.09
SHANK3-202ENST00000414786 YPEL3P61236 119 aaPredicted RBP14.5□□□□□ -0.09
SHANK3-202ENST00000414786 SND1-IT1Q9HBX3 110 aa14.5□□□□□ -0.09
SHANK3-202ENST00000414786 UBE2D4Q9Y2X8 147 aa14.5□□□□□ -0.09
SHANK3-202ENST00000414786 DEFB125Q8N687 156 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms