RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 TDRG1Q3Y452 100 aa6.09□□□□□ -1.43
HDAC9-207ENST00000413509 GFI1BQ5VTD9 330 aa6.09□□□□□ -1.43
HDAC9-207ENST00000413509 Q6ZQT7 251 aa6.09□□□□□ -1.43
HDAC9-207ENST00000413509 SPATA3Q8NHX4 192 aa6.09□□□□□ -1.43
HDAC9-207ENST00000413509 FRZBQ92765 325 aa6.09□□□□□ -1.43
HDAC9-207ENST00000413509 PGLYRP4Q96LB8 373 aa6.09□□□□□ -1.43
HDAC9-207ENST00000413509 SSBP4Q9BWG4 385 aaPredicted RBP6.09□□□□□ -1.43
HDAC9-207ENST00000413509 IGHV4-4A0A075B6R2 117 aa6.08□□□□□ -1.44
HDAC9-207ENST00000413509 A0A1B0GUT8 65 aa6.08□□□□□ -1.44
HDAC9-207ENST00000413509 SNAI2O43623 268 aa6.08□□□□□ -1.44
HDAC9-207ENST00000413509 HIST1H2BKO60814 126 aa6.08□□□□□ -1.44
HDAC9-207ENST00000413509 HLA-DQA1P01909 254 aa6.08□□□□□ -1.44
HDAC9-207ENST00000413509 ORM1P02763 201 aa6.08□□□□□ -1.44
HDAC9-207ENST00000413509 HIST1H2BJP06899 126 aa6.08□□□□□ -1.44
HDAC9-207ENST00000413509 OR5AL1P0C617 328 aa6.08□□□□□ -1.44
HDAC9-207ENST00000413509 ARMS2P0C7Q2 107 aa6.08□□□□□ -1.44
HDAC9-207ENST00000413509 MED14OSP0DP75 135 aa6.08□□□□□ -1.44
HDAC9-207ENST00000413509 HIST1H2BOP23527 126 aa6.08□□□□□ -1.44
HDAC9-207ENST00000413509 HIST1H2BBP33778 126 aa6.08□□□□□ -1.44
HDAC9-207ENST00000413509 RNASE4P34096 147 aaKnown RBP6.08□□□□□ -1.44
HDAC9-207ENST00000413509 CDKN1BP46527 198 aa6.08□□□□□ -1.44
HDAC9-207ENST00000413509 HIST1H2BDP58876 126 aa6.08□□□□□ -1.44
HDAC9-207ENST00000413509 HIST1H2BCP62807 126 aa6.08□□□□□ -1.44
HDAC9-207ENST00000413509 HBBP68871 147 aa6.08□□□□□ -1.44
HDAC9-207ENST00000413509 HIST2H2BEQ16778 126 aa6.08□□□□□ -1.44
HDAC9-207ENST00000413509 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.08□□□□□ -1.44
HDAC9-207ENST00000413509 MRPL54Q6P161 138 aaKnown RBP6.08□□□□□ -1.44
HDAC9-207ENST00000413509 FER1L6-AS1Q8NA97 138 aa6.08□□□□□ -1.44
HDAC9-207ENST00000413509 HIST1H2BHQ93079 126 aa6.08□□□□□ -1.44
HDAC9-207ENST00000413509 HIST1H2BNQ99877 126 aa6.08□□□□□ -1.44
HDAC9-207ENST00000413509 HIST1H2BMQ99879 126 aa6.08□□□□□ -1.44
HDAC9-207ENST00000413509 SCRT2Q9NQ03 307 aa6.08□□□□□ -1.44
HDAC9-207ENST00000413509 TMSB15BA0A087X1C1 80 aa6.07□□□□□ -1.44
HDAC9-207ENST00000413509 SNURFLB1AK76 121 aa6.07□□□□□ -1.44
HDAC9-207ENST00000413509 OR11H12B2RN74 326 aa6.07□□□□□ -1.44
HDAC9-207ENST00000413509 F2Z2F3 143 aa6.07□□□□□ -1.44
HDAC9-207ENST00000413509 CRXO43186 299 aaPredicted RBP6.07□□□□□ -1.44
HDAC9-207ENST00000413509 SPINK4O60575 86 aa6.07□□□□□ -1.44
HDAC9-207ENST00000413509 TRGC1P0CF51 173 aa6.07□□□□□ -1.44
HDAC9-207ENST00000413509 FABP9Q0Z7S8 132 aa6.07□□□□□ -1.44
HDAC9-207ENST00000413509 ZNF124Q15973 351 aa6.07□□□□□ -1.44
HDAC9-207ENST00000413509 COA6Q5JTJ3 125 aaKnown RBP6.07□□□□□ -1.44
HDAC9-207ENST00000413509 C9orf66Q5T8R8 295 aa6.07□□□□□ -1.44
HDAC9-207ENST00000413509 LYZL1Q6UWQ5 148 aa6.07□□□□□ -1.44
HDAC9-207ENST00000413509 ZNF493Q6ZR52 646 aa6.07□□□□□ -1.44
HDAC9-207ENST00000413509 TRPT1Q86TN4 253 aaKnown RBP6.07□□□□□ -1.44
HDAC9-207ENST00000413509 ZFP82Q8N141 532 aa6.07□□□□□ -1.44
HDAC9-207ENST00000413509 LINC00467Q9BRT7 94 aa6.07□□□□□ -1.44
HDAC9-207ENST00000413509 MRPL18Q9H0U6 180 aaKnown RBP6.07□□□□□ -1.44
HDAC9-207ENST00000413509 TRAPPC1Q9Y5R8 145 aa6.07□□□□□ -1.44
HDAC9-207ENST00000413509 LOC105371267A0A1B0GV96 52 aa6.06□□□□□ -1.44
HDAC9-207ENST00000413509 C5orf52A6NGY3 159 aa6.06□□□□□ -1.44
HDAC9-207ENST00000413509 M0R2Z0 102 aa6.06□□□□□ -1.44
HDAC9-207ENST00000413509 NXPH4O95158 308 aa6.06□□□□□ -1.44
HDAC9-207ENST00000413509 AMBPP02760 352 aa6.06□□□□□ -1.44
HDAC9-207ENST00000413509 S100A8P05109 93 aa6.06□□□□□ -1.44
HDAC9-207ENST00000413509 SLAQ13239 276 aa6.06□□□□□ -1.44
HDAC9-207ENST00000413509 RIGQ13278 110 aa6.06□□□□□ -1.44
HDAC9-207ENST00000413509 SPINK13Q1W4C9 94 aa6.06□□□□□ -1.44
HDAC9-207ENST00000413509 ANXA2RQ3ZCQ2 193 aa6.06□□□□□ -1.44
HDAC9-207ENST00000413509 DMRTA1Q5VZB9 504 aa6.06□□□□□ -1.44
HDAC9-207ENST00000413509 SHISA2Q6UWI4 295 aa6.06□□□□□ -1.44
HDAC9-207ENST00000413509 MCRIP2Q9BUT9 160 aaKnown RBP6.06□□□□□ -1.44
HDAC9-207ENST00000413509 TRAV12-3A0A0B4J271 114 aa6.05□□□□□ -1.44
HDAC9-207ENST00000413509 GRIFINA4D1Z8 144 aa6.05□□□□□ -1.44
HDAC9-207ENST00000413509 J3KRW8 73 aa6.05□□□□□ -1.44
HDAC9-207ENST00000413509 IGKV3-20P01619 116 aa6.05□□□□□ -1.44
HDAC9-207ENST00000413509 CD7P09564 240 aa6.05□□□□□ -1.44
HDAC9-207ENST00000413509 RBMY1A1P0DJD3 496 aaKnown RBP6.05□□□□□ -1.44
HDAC9-207ENST00000413509 RBMY1CP0DJD4 496 aa6.05□□□□□ -1.44
HDAC9-207ENST00000413509 RBMY1FQ15415 496 aaKnown RBP6.05□□□□□ -1.44
HDAC9-207ENST00000413509 TMEM158Q8WZ71 300 aa6.05□□□□□ -1.44
HDAC9-207ENST00000413509 KCNS1Q96KK3 526 aa6.05□□□□□ -1.44
HDAC9-207ENST00000413509 C20orf144Q9BQM9 153 aa6.05□□□□□ -1.44
HDAC9-207ENST00000413509 TP53TG3Q9ULZ0 132 aa6.05□□□□□ -1.44
HDAC9-207ENST00000413509 NBEAL1Q6ZS30 2694 aa6.05□□□□□ -1.44
HDAC9-207ENST00000413509 TRAV12-2A0A075B6T6 113 aa6.04□□□□□ -1.44
HDAC9-207ENST00000413509 IGHV1OR15-1A0A075B7D0 117 aa6.04□□□□□ -1.44
HDAC9-207ENST00000413509 IGHV3-16A0A0C4DH30 117 aa6.04□□□□□ -1.44
HDAC9-207ENST00000413509 UBE2CO00762 179 aa6.04□□□□□ -1.44
HDAC9-207ENST00000413509 APCSP02743 223 aa6.04□□□□□ -1.44
HDAC9-207ENST00000413509 GIG44P09565 113 aaPredicted RBP6.04□□□□□ -1.44
HDAC9-207ENST00000413509 RNASE3P12724 160 aaKnown RBP6.04□□□□□ -1.44
HDAC9-207ENST00000413509 ASIPP42127 132 aa6.04□□□□□ -1.44
HDAC9-207ENST00000413509 CAMPP49913 170 aa6.04□□□□□ -1.44
HDAC9-207ENST00000413509 CACNG7P62955 275 aa6.04□□□□□ -1.44
HDAC9-207ENST00000413509 BORCS7Q96B45 105 aa6.04□□□□□ -1.44
HDAC9-207ENST00000413509 C9orf85Q96MD7 179 aa6.04□□□□□ -1.44
HDAC9-207ENST00000413509 MUC4Q99102 2169 aa6.04□□□□□ -1.44
HDAC9-207ENST00000413509 LOC102724200A0A096LPH7 203 aaPredicted RBP6.03□□□□□ -1.44
HDAC9-207ENST00000413509 H3BVH4 76 aa6.03□□□□□ -1.44
HDAC9-207ENST00000413509 GNRH2O43555 120 aa6.03□□□□□ -1.44
HDAC9-207ENST00000413509 HOXA5P20719 270 aa6.03□□□□□ -1.44
HDAC9-207ENST00000413509 NTF3P20783 257 aa6.03□□□□□ -1.44
HDAC9-207ENST00000413509 Q0VG73 95 aa6.03□□□□□ -1.44
HDAC9-207ENST00000413509 MUC21Q5SSG8 566 aa6.03□□□□□ -1.44
HDAC9-207ENST00000413509 FAM104BQ5XKR9 115 aa6.03□□□□□ -1.44
HDAC9-207ENST00000413509 FAM159AQ6UWV7 190 aa6.03□□□□□ -1.44
HDAC9-207ENST00000413509 STHQ8IWL8 128 aa6.03□□□□□ -1.44
HDAC9-207ENST00000413509 OR10AG1Q8NH19 301 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms