RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 ITLN2Q8WWU7 325 aaPredicted RBP11.4□□□□□ -0.58
TTC39A-208ENST00000413473 TMEM160Q9NX00 188 aa11.4□□□□□ -0.58
TTC39A-208ENST00000413473 DEFB1P60022 68 aa11.4□□□□□ -0.58
TTC39A-208ENST00000413473 PSMG4Q5JS54 123 aa11.4□□□□□ -0.58
TTC39A-208ENST00000413473 C9orf139Q6ZV77 190 aa11.4□□□□□ -0.58
TTC39A-208ENST00000413473 SMPXQ9UHP9 88 aa11.4□□□□□ -0.58
TTC39A-208ENST00000413473 TRAV40A0A0B4J280 105 aa11.39□□□□□ -0.59
TTC39A-208ENST00000413473 UFSP1Q6NVU6 142 aa11.39□□□□□ -0.59
TTC39A-208ENST00000413473 GTF2H5Q6ZYL4 71 aa11.39□□□□□ -0.59
TTC39A-208ENST00000413473 GPHB5Q86YW7 130 aa11.39□□□□□ -0.59
TTC39A-208ENST00000413473 MRPL35Q9NZE8 188 aaKnown RBP11.39□□□□□ -0.59
TTC39A-208ENST00000413473 IGHV4-39P01824 125 aa11.39□□□□□ -0.59
TTC39A-208ENST00000413473 ATP6V0BQ99437 205 aa11.39□□□□□ -0.59
TTC39A-208ENST00000413473 COL12A1Q99715 3063 aa11.39□□□□□ -0.59
TTC39A-208ENST00000413473 IGHV1-69DA0A0B4J2H0 117 aa11.38□□□□□ -0.59
TTC39A-208ENST00000413473 IGHV1-69P01742 117 aa11.38□□□□□ -0.59
TTC39A-208ENST00000413473 GCSHP23434 173 aa11.38□□□□□ -0.59
TTC39A-208ENST00000413473 SRSF1Q07955 248 aaKnown RBP eCLIP11.38□□□□□ -0.59
TTC39A-208ENST00000413473 LY6EQ16553 131 aa11.37□□□□□ -0.59
TTC39A-208ENST00000413473 ZFAND2AQ8N6M9 145 aa11.37□□□□□ -0.59
TTC39A-208ENST00000413473 LINC00477Q96M19 166 aa11.37□□□□□ -0.59
TTC39A-208ENST00000413473 HIGD1BQ9P298 99 aa11.37□□□□□ -0.59
TTC39A-208ENST00000413473 LENEPQ9Y5L5 61 aa11.37□□□□□ -0.59
TTC39A-208ENST00000413473 TRBV25-1A0A075B6N4 114 aa11.37□□□□□ -0.59
TTC39A-208ENST00000413473 M0R381 172 aa11.37□□□□□ -0.59
TTC39A-208ENST00000413473 IGHV3-11P01762 117 aa11.37□□□□□ -0.59
TTC39A-208ENST00000413473 CRIP2P52943 208 aaPredicted RBP11.37□□□□□ -0.59
TTC39A-208ENST00000413473 FXYD2P54710 66 aa11.37□□□□□ -0.59
TTC39A-208ENST00000413473 ITPR1Q14643 2758 aa11.37□□□□□ -0.59
TTC39A-208ENST00000413473 CSPG4Q6UVK1 2322 aa11.37□□□□□ -0.59
TTC39A-208ENST00000413473 K7EP34 96 aa11.37□□□□□ -0.59
TTC39A-208ENST00000413473 RPL11P62913 178 aaKnown RBP11.37□□□□□ -0.59
TTC39A-208ENST00000413473 OR10J6PQ8NGY7 276 aa11.37□□□□□ -0.59
TTC39A-208ENST00000413473 VPS25Q9BRG1 176 aa11.37□□□□□ -0.59
TTC39A-208ENST00000413473 CHAC1Q9BUX1 264 aa11.37□□□□□ -0.59
TTC39A-208ENST00000413473 NDUFA4O00483 81 aa11.36□□□□□ -0.59
TTC39A-208ENST00000413473 MRAP2Q96G30 205 aa11.36□□□□□ -0.59
TTC39A-208ENST00000413473 SMIM13P0DJ93 91 aa11.36□□□□□ -0.59
TTC39A-208ENST00000413473 S100A4P26447 101 aaKnown RBP11.36□□□□□ -0.59
TTC39A-208ENST00000413473 IGKV3-7A0A075B6H7 116 aa11.35□□□□□ -0.59
TTC39A-208ENST00000413473 A0A087WX48 190 aa11.35□□□□□ -0.59
TTC39A-208ENST00000413473 TRAV21A0A0B4J279 112 aa11.35□□□□□ -0.59
TTC39A-208ENST00000413473 SOCS3O14543 225 aa11.35□□□□□ -0.59
TTC39A-208ENST00000413473 OVOL1O14753 267 aa11.35□□□□□ -0.59
TTC39A-208ENST00000413473 SMIM2Q9BVW6 85 aa11.35□□□□□ -0.59
TTC39A-208ENST00000413473 KLK15Q9H2R5 256 aa11.35□□□□□ -0.59
TTC39A-208ENST00000413473 AGRNO00468 2067 aa11.35□□□□□ -0.59
TTC39A-208ENST00000413473 IGHV4-61A0A0C4DH41 118 aa11.35□□□□□ -0.59
TTC39A-208ENST00000413473 A0A1W2PPM0 123 aa11.35□□□□□ -0.59
TTC39A-208ENST00000413473 F6UB75 175 aa11.35□□□□□ -0.59
TTC39A-208ENST00000413473 IGHV4-38-2P0DP08 117 aa11.35□□□□□ -0.59
TTC39A-208ENST00000413473 MEGF9Q9H1U4 602 aa11.35□□□□□ -0.59
TTC39A-208ENST00000413473 ANXA2RQ3ZCQ2 193 aa11.34□□□□□ -0.59
TTC39A-208ENST00000413473 C14orf178Q8N769 122 aaPredicted RBP11.34□□□□□ -0.59
TTC39A-208ENST00000413473 MAPKAPK5-AS1Q8N8E1 139 aa11.34□□□□□ -0.59
TTC39A-208ENST00000413473 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.34□□□□□ -0.59
TTC39A-208ENST00000413473 K7ERU9 68 aa11.34□□□□□ -0.59
TTC39A-208ENST00000413473 RNASE4P34096 147 aaKnown RBP11.34□□□□□ -0.59
TTC39A-208ENST00000413473 LCNL1Q6ZST4 164 aa11.34□□□□□ -0.59
TTC39A-208ENST00000413473 PHLDA3Q9Y5J5 127 aa11.34□□□□□ -0.59
TTC39A-208ENST00000413473 SAP30O75446 220 aa11.33□□□□□ -0.6
TTC39A-208ENST00000413473 PF4V1P10720 104 aa11.33□□□□□ -0.6
TTC39A-208ENST00000413473 GNLYP22749 145 aa11.33□□□□□ -0.6
TTC39A-208ENST00000413473 RASL10AQ92737 203 aa11.33□□□□□ -0.6
TTC39A-208ENST00000413473 SPCS1Q9Y6A9 102 aa11.33□□□□□ -0.6
TTC39A-208ENST00000413473 ASIPP42127 132 aa11.33□□□□□ -0.6
TTC39A-208ENST00000413473 SUMO2P61956 95 aaKnown RBP11.33□□□□□ -0.6
TTC39A-208ENST00000413473 BLCAPP62952 87 aa11.33□□□□□ -0.6
TTC39A-208ENST00000413473 RPL39LQ96EH5 51 aaKnown RBP11.33□□□□□ -0.6
TTC39A-208ENST00000413473 H3BUX3 64 aa11.32□□□□□ -0.6
TTC39A-208ENST00000413473 K7ERJ3 54 aa11.32□□□□□ -0.6
TTC39A-208ENST00000413473 GNRH2O43555 120 aa11.32□□□□□ -0.6
TTC39A-208ENST00000413473 SAMD5Q5TGI4 173 aa11.32□□□□□ -0.6
TTC39A-208ENST00000413473 USMG5Q96IX5 58 aa11.32□□□□□ -0.6
TTC39A-208ENST00000413473 IGHG2P01859 326 aa11.32□□□□□ -0.6
TTC39A-208ENST00000413473 Q6ZS46 218 aa11.32□□□□□ -0.6
TTC39A-208ENST00000413473 DPH3P1Q9H4G8 78 aa11.32□□□□□ -0.6
TTC39A-208ENST00000413473 K7EMI3 77 aa11.31□□□□□ -0.6
TTC39A-208ENST00000413473 FABP2P12104 132 aa11.31□□□□□ -0.6
TTC39A-208ENST00000413473 ORMDL2Q53FV1 153 aa11.31□□□□□ -0.6
TTC39A-208ENST00000413473 PLNP26678 52 aa11.31□□□□□ -0.6
TTC39A-208ENST00000413473 CEND1Q8N111 149 aa11.31□□□□□ -0.6
TTC39A-208ENST00000413473 SCGB3A1Q96QR1 104 aa11.31□□□□□ -0.6
TTC39A-208ENST00000413473 PIMREGQ9BSJ6 248 aa11.31□□□□□ -0.6
TTC39A-208ENST00000413473 RHPN1-AS1Q9BWJ2 59 aa11.31□□□□□ -0.6
TTC39A-208ENST00000413473 TM2D2Q9BX73 214 aa11.31□□□□□ -0.6
TTC39A-208ENST00000413473 H7C1H1 209 aa11.3□□□□□ -0.6
TTC39A-208ENST00000413473 MGPP08493 103 aa11.3□□□□□ -0.6
TTC39A-208ENST00000413473 HLA-DRB4P13762 266 aa11.3□□□□□ -0.6
TTC39A-208ENST00000413473 FAM19A4Q96LR4 140 aa11.3□□□□□ -0.6
TTC39A-208ENST00000413473 C20orf78Q9BR46 151 aa11.3□□□□□ -0.6
TTC39A-208ENST00000413473 NHP2Q9NX24 153 aaKnown RBP11.3□□□□□ -0.6
TTC39A-208ENST00000413473 HLA-DRB4X5D2U9 266 aa11.3□□□□□ -0.6
TTC39A-208ENST00000413473 MUC4Q99102 2169 aa11.3□□□□□ -0.6
TTC39A-208ENST00000413473 F8VRH5 84 aa11.3□□□□□ -0.6
TTC39A-208ENST00000413473 SRD5A1P18405 259 aa11.3□□□□□ -0.6
TTC39A-208ENST00000413473 TRAV12-1A0A0B4J245 112 aa11.29□□□□□ -0.6
TTC39A-208ENST00000413473 A6NDX4 124 aa11.29□□□□□ -0.6
TTC39A-208ENST00000413473 TOMM6Q96B49 74 aa11.29□□□□□ -0.6
TTC39A-208ENST00000413473 H3BUA1 57 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms