RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 S100A4P26447 101 aaKnown RBP8.69□□□□□ -1.02
TRAFD1-202ENST00000412615 DEFB112Q30KQ8 113 aa8.69□□□□□ -1.02
TRAFD1-202ENST00000412615 SAMD13Q5VXD3 122 aa8.69□□□□□ -1.02
TRAFD1-202ENST00000412615 WFDC3Q8IUB2 231 aa8.69□□□□□ -1.02
TRAFD1-202ENST00000412615 NRACQ8N912 160 aa8.69□□□□□ -1.02
TRAFD1-202ENST00000412615 MRAP2Q96G30 205 aa8.69□□□□□ -1.02
TRAFD1-202ENST00000412615 CACNA1AO00555 2505 aa8.69□□□□□ -1.02
TRAFD1-202ENST00000412615 J3QLI3 93 aa8.68□□□□□ -1.02
TRAFD1-202ENST00000412615 IGHV4-59P01825 116 aa8.68□□□□□ -1.02
TRAFD1-202ENST00000412615 ASIPP42127 132 aa8.68□□□□□ -1.02
TRAFD1-202ENST00000412615 PSMG4Q5JS54 123 aa8.68□□□□□ -1.02
TRAFD1-202ENST00000412615 APRG1Q8IVJ8 170 aa8.68□□□□□ -1.02
TRAFD1-202ENST00000412615 TMEM158Q8WZ71 300 aa8.68□□□□□ -1.02
TRAFD1-202ENST00000412615 PIEZO1Q92508 2521 aa8.68□□□□□ -1.02
TRAFD1-202ENST00000412615 DOPEY1Q5JWR5 2465 aa8.68□□□□□ -1.02
TRAFD1-202ENST00000412615 PSMB8P28062 276 aa8.68□□□□□ -1.02
TRAFD1-202ENST00000412615 ID1P41134 155 aa8.68□□□□□ -1.02
TRAFD1-202ENST00000412615 DEFB1P60022 68 aa8.68□□□□□ -1.02
TRAFD1-202ENST00000412615 TMEM89A2RUT3 159 aa8.67□□□□□ -1.02
TRAFD1-202ENST00000412615 F6UB75 175 aa8.67□□□□□ -1.02
TRAFD1-202ENST00000412615 PRSS1P07477 247 aa8.67□□□□□ -1.02
TRAFD1-202ENST00000412615 MED14OSP0DP75 135 aa8.67□□□□□ -1.02
TRAFD1-202ENST00000412615 RNASE4P34096 147 aaKnown RBP8.67□□□□□ -1.02
TRAFD1-202ENST00000412615 LAGE3Q14657 143 aa8.67□□□□□ -1.02
TRAFD1-202ENST00000412615 C2orf91Q6ZV80 131 aa8.67□□□□□ -1.02
TRAFD1-202ENST00000412615 DKK2Q9UBU2 259 aa8.67□□□□□ -1.02
TRAFD1-202ENST00000412615 TRAV26-2A0A0B4J265 109 aa8.67□□□□□ -1.02
TRAFD1-202ENST00000412615 FGF6P10767 208 aa8.67□□□□□ -1.02
TRAFD1-202ENST00000412615 ANXA2RQ3ZCQ2 193 aa8.67□□□□□ -1.02
TRAFD1-202ENST00000412615 Q6ZVH6 145 aa8.67□□□□□ -1.02
TRAFD1-202ENST00000412615 BOD1L2Q8IYS8 172 aa8.67□□□□□ -1.02
TRAFD1-202ENST00000412615 COL12A1Q99715 3063 aa8.67□□□□□ -1.02
TRAFD1-202ENST00000412615 PHLDA3Q9Y5J5 127 aa8.67□□□□□ -1.02
TRAFD1-202ENST00000412615 M0R381 172 aa8.67□□□□□ -1.02
TRAFD1-202ENST00000412615 ATP5LO75964 103 aa8.67□□□□□ -1.02
TRAFD1-202ENST00000412615 TGFAP01135 160 aa8.67□□□□□ -1.02
TRAFD1-202ENST00000412615 COX6B1P14854 86 aa8.67□□□□□ -1.02
TRAFD1-202ENST00000412615 SRSF1Q07955 248 aaKnown RBP eCLIP8.67□□□□□ -1.02
TRAFD1-202ENST00000412615 VPS13CQ709C8 3753 aa8.66□□□□□ -1.02
TRAFD1-202ENST00000412615 CFAP46Q8IYW2 2715 aa8.66□□□□□ -1.02
TRAFD1-202ENST00000412615 A0A096LNT2 108 aa8.66□□□□□ -1.02
TRAFD1-202ENST00000412615 CD5LO43866 347 aa8.66□□□□□ -1.02
TRAFD1-202ENST00000412615 SMIM17P0DL12 118 aa8.66□□□□□ -1.02
TRAFD1-202ENST00000412615 MYOZ3Q8TDC0 251 aa8.66□□□□□ -1.02
TRAFD1-202ENST00000412615 DPH3P1Q9H4G8 78 aa8.66□□□□□ -1.02
TRAFD1-202ENST00000412615 ZFHX3Q15911 3703 aa8.66□□□□□ -1.02
TRAFD1-202ENST00000412615 SIVA1O15304 175 aa8.66□□□□□ -1.02
TRAFD1-202ENST00000412615 SRD5A1P18405 259 aa8.66□□□□□ -1.02
TRAFD1-202ENST00000412615 PTTG1IPP53801 180 aa8.66□□□□□ -1.02
TRAFD1-202ENST00000412615 UBE2V1Q13404 147 aa8.66□□□□□ -1.02
TRAFD1-202ENST00000412615 OR9G4Q8NGQ1 327 aa8.66□□□□□ -1.02
TRAFD1-202ENST00000412615 ZMAT4Q9H898 229 aa8.66□□□□□ -1.02
TRAFD1-202ENST00000412615 SPG11Q96JI7 2443 aa8.65□□□□□ -1.02
TRAFD1-202ENST00000412615 TAX1BP3O14907 124 aa8.65□□□□□ -1.03
TRAFD1-202ENST00000412615 TMEM97Q5BJF2 176 aa8.65□□□□□ -1.03
TRAFD1-202ENST00000412615 DCANP1Q8TF63 244 aa8.65□□□□□ -1.03
TRAFD1-202ENST00000412615 SMIM2Q9BVW6 85 aa8.65□□□□□ -1.03
TRAFD1-202ENST00000412615 A1L4Q6 167 aa8.64□□□□□ -1.03
TRAFD1-202ENST00000412615 GNRH2O43555 120 aa8.64□□□□□ -1.03
TRAFD1-202ENST00000412615 CIDEAO60543 219 aa8.64□□□□□ -1.03
TRAFD1-202ENST00000412615 C14orf178Q8N769 122 aaPredicted RBP8.64□□□□□ -1.03
TRAFD1-202ENST00000412615 FOXC2Q99958 501 aa8.64□□□□□ -1.03
TRAFD1-202ENST00000412615 C20orf78Q9BR46 151 aa8.64□□□□□ -1.03
TRAFD1-202ENST00000412615 SELENOKQ9Y6D0 94 aa8.64□□□□□ -1.03
TRAFD1-202ENST00000412615 CELSR1Q9NYQ6 3014 aa8.64□□□□□ -1.03
TRAFD1-202ENST00000412615 KLLNB2CW77 178 aa8.64□□□□□ -1.03
TRAFD1-202ENST00000412615 IGKCP01834 107 aa8.64□□□□□ -1.03
TRAFD1-202ENST00000412615 EDN2P20800 178 aa8.64□□□□□ -1.03
TRAFD1-202ENST00000412615 NMUP48645 174 aa8.64□□□□□ -1.03
TRAFD1-202ENST00000412615 SEC11AP67812 179 aa8.64□□□□□ -1.03
TRAFD1-202ENST00000412615 KIR3DS1Q14943 382 aa8.64□□□□□ -1.03
TRAFD1-202ENST00000412615 CCL25O15444 150 aa8.63□□□□□ -1.03
TRAFD1-202ENST00000412615 RNASE3P12724 160 aaKnown RBP8.63□□□□□ -1.03
TRAFD1-202ENST00000412615 SUMO2P61956 95 aaKnown RBP8.63□□□□□ -1.03
TRAFD1-202ENST00000412615 HHLA3Q9XRX5 114 aa8.63□□□□□ -1.03
TRAFD1-202ENST00000412615 K7EMI3 77 aa8.63□□□□□ -1.03
TRAFD1-202ENST00000412615 DPM2O94777 84 aa8.63□□□□□ -1.03
TRAFD1-202ENST00000412615 TCTAP57738 103 aa8.63□□□□□ -1.03
TRAFD1-202ENST00000412615 VAMP3Q15836 100 aa8.63□□□□□ -1.03
TRAFD1-202ENST00000412615 ORMDL2Q53FV1 153 aa8.63□□□□□ -1.03
TRAFD1-202ENST00000412615 C10orf99Q6UWK7 81 aa8.63□□□□□ -1.03
TRAFD1-202ENST00000412615 FAM159AQ6UWV7 190 aa8.63□□□□□ -1.03
TRAFD1-202ENST00000412615 AP1S3Q96PC3 154 aa8.63□□□□□ -1.03
TRAFD1-202ENST00000412615 VPREB3Q9UKI3 123 aa8.63□□□□□ -1.03
TRAFD1-202ENST00000412615 IGSF10Q6WRI0 2623 aa8.63□□□□□ -1.03
TRAFD1-202ENST00000412615 SPRY2O43597 315 aa8.62□□□□□ -1.03
TRAFD1-202ENST00000412615 PPP1R17O96001 155 aa8.62□□□□□ -1.03
TRAFD1-202ENST00000412615 MAPK1IP1LQ8NDC0 245 aa8.62□□□□□ -1.03
TRAFD1-202ENST00000412615 RASL10AQ92737 203 aa8.62□□□□□ -1.03
TRAFD1-202ENST00000412615 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.62□□□□□ -1.031e-6■■■□□ 16.6
TRAFD1-202ENST00000412615 PRB1P04280 392 aa8.62□□□□□ -1.03
TRAFD1-202ENST00000412615 PCP2Q8IVA1 136 aa8.62□□□□□ -1.03
TRAFD1-202ENST00000412615 USP9XQ93008 2570 aaPredicted RBP8.61□□□□□ -1.03
TRAFD1-202ENST00000412615 C7orf71A4D174 169 aa8.61□□□□□ -1.03
TRAFD1-202ENST00000412615 ELANEP08246 267 aa8.61□□□□□ -1.03
TRAFD1-202ENST00000412615 MGPP08493 103 aa8.61□□□□□ -1.03
TRAFD1-202ENST00000412615 HSD52Q0P140 79 aa8.61□□□□□ -1.03
TRAFD1-202ENST00000412615 RNF223E7ERA6 249 aa8.61□□□□□ -1.03
TRAFD1-202ENST00000412615 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.61□□□□□ -1.03
TRAFD1-202ENST00000412615 NXPH4O95158 308 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms