RNA–Protein interactions for RNA: ENST00000411850.5

TOM1-204, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TOM1, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-204ENST00000411850 PCP4P48539 62 aa12.84□□□□□ -0.35
TOM1-204ENST00000411850 SRSF1Q07955 248 aaKnown RBP eCLIP12.84□□□□□ -0.35
TOM1-204ENST00000411850 OCIAD2Q56VL3 154 aa12.84□□□□□ -0.35
TOM1-204ENST00000411850 UNQ9165/PRO28630Q6UXU0 137 aa12.84□□□□□ -0.35
TOM1-204ENST00000411850 ZFAND2AQ8N6M9 145 aa12.84□□□□□ -0.35
TOM1-204ENST00000411850 GTF2H5Q6ZYL4 71 aa12.83□□□□□ -0.36
TOM1-204ENST00000411850 JMJD8Q96S16 334 aa12.83□□□□□ -0.36
TOM1-204ENST00000411850 ACACBO00763 2458 aa12.83□□□□□ -0.36
TOM1-204ENST00000411850 H3BUA1 57 aa12.83□□□□□ -0.36
TOM1-204ENST00000411850 TRBV12-3P01733 135 aa12.83□□□□□ -0.36
TOM1-204ENST00000411850 OR10J6PQ8NGY7 276 aa12.83□□□□□ -0.36
TOM1-204ENST00000411850 TRAV21A0A0B4J279 112 aa12.82□□□□□ -0.36
TOM1-204ENST00000411850 A0A0G2JLM5 398 aa12.82□□□□□ -0.36
TOM1-204ENST00000411850 H3BUT2 72 aa12.82□□□□□ -0.36
TOM1-204ENST00000411850 BRD3OSQ6XYD6 125 aa12.82□□□□□ -0.36
TOM1-204ENST00000411850 USMG5Q96IX5 58 aa12.82□□□□□ -0.36
TOM1-204ENST00000411850 ZC2HC1BQ5TFG8 222 aa12.81□□□□□ -0.36
TOM1-204ENST00000411850 TRAV40A0A0B4J280 105 aa12.81□□□□□ -0.36
TOM1-204ENST00000411850 GTSCR1Q86UQ5 136 aa12.81□□□□□ -0.36
TOM1-204ENST00000411850 SMIM2Q9BVW6 85 aa12.81□□□□□ -0.36
TOM1-204ENST00000411850 A0A087WX48 190 aa12.8□□□□□ -0.36
TOM1-204ENST00000411850 K7EP34 96 aa12.8□□□□□ -0.36
TOM1-204ENST00000411850 IGHG2P01859 326 aa12.8□□□□□ -0.36
TOM1-204ENST00000411850 MRPL35Q9NZE8 188 aaKnown RBP12.8□□□□□ -0.36
TOM1-204ENST00000411850 CACNA1BQ00975 2339 aa12.8□□□□□ -0.36
TOM1-204ENST00000411850 FAM19A4Q96LR4 140 aa12.8□□□□□ -0.36
TOM1-204ENST00000411850 CHAC1Q9BUX1 264 aa12.8□□□□□ -0.36
TOM1-204ENST00000411850 MED14OSP0DP75 135 aa12.79□□□□□ -0.36
TOM1-204ENST00000411850 PIMREGQ9BSJ6 248 aa12.79□□□□□ -0.36
TOM1-204ENST00000411850 TTTY13Q9BZ97 58 aa12.79□□□□□ -0.36
TOM1-204ENST00000411850 TMEM160Q9NX00 188 aa12.79□□□□□ -0.36
TOM1-204ENST00000411850 TRBV25-1A0A075B6N4 114 aa12.79□□□□□ -0.36
TOM1-204ENST00000411850 IGHV4-61A0A0C4DH41 118 aa12.79□□□□□ -0.36
TOM1-204ENST00000411850 RNF151Q2KHN1 245 aa12.79□□□□□ -0.36
TOM1-204ENST00000411850 APRG1Q8IVJ8 170 aa12.79□□□□□ -0.36
TOM1-204ENST00000411850 A6NDX4 124 aa12.78□□□□□ -0.36
TOM1-204ENST00000411850 ASIPP42127 132 aa12.78□□□□□ -0.36
TOM1-204ENST00000411850 C20orf78Q9BR46 151 aa12.78□□□□□ -0.36
TOM1-204ENST00000411850 TRAV12-1A0A0B4J245 112 aa12.78□□□□□ -0.36
TOM1-204ENST00000411850 TRBV7-9A0A0J9YWB2 115 aa12.78□□□□□ -0.36
TOM1-204ENST00000411850 K7EMI3 77 aa12.78□□□□□ -0.36
TOM1-204ENST00000411850 SMIM13P0DJ93 91 aa12.78□□□□□ -0.36
TOM1-204ENST00000411850 PLNP26678 52 aa12.78□□□□□ -0.36
TOM1-204ENST00000411850 ORMDL2Q53FV1 153 aa12.78□□□□□ -0.36
TOM1-204ENST00000411850 RAB37Q96AX2 223 aa12.78□□□□□ -0.36
TOM1-204ENST00000411850 DPH3P1Q9H4G8 78 aa12.78□□□□□ -0.36
TOM1-204ENST00000411850 USP24Q9UPU5 2620 aa12.77□□□□□ -0.36
TOM1-204ENST00000411850 A0A1W2PPM0 123 aa12.77□□□□□ -0.36
TOM1-204ENST00000411850 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.77□□□□□ -0.36
TOM1-204ENST00000411850 J3KRW8 73 aa12.77□□□□□ -0.36
TOM1-204ENST00000411850 M0R381 172 aa12.77□□□□□ -0.36
TOM1-204ENST00000411850 IGHV4-38-2P0DP08 117 aa12.77□□□□□ -0.36
TOM1-204ENST00000411850 RASL10AQ92737 203 aa12.77□□□□□ -0.36
TOM1-204ENST00000411850 SLC25A16P16260 332 aa12.77□□□□□ -0.37
TOM1-204ENST00000411850 GCSHP23434 173 aa12.77□□□□□ -0.37
TOM1-204ENST00000411850 S100A4P26447 101 aaKnown RBP12.77□□□□□ -0.37
TOM1-204ENST00000411850 FXYD2P54710 66 aa12.77□□□□□ -0.37
TOM1-204ENST00000411850 SUMO2P61956 95 aaKnown RBP12.77□□□□□ -0.37
TOM1-204ENST00000411850 ANXA2RQ3ZCQ2 193 aa12.77□□□□□ -0.37
TOM1-204ENST00000411850 C10orf105Q8TEF2 133 aa12.77□□□□□ -0.37
TOM1-204ENST00000411850 CCL19Q99731 98 aa12.77□□□□□ -0.37
TOM1-204ENST00000411850 SPOCK3Q9BQ16 436 aa12.77□□□□□ -0.37
TOM1-204ENST00000411850 NAA38Q9BRA0 125 aaKnown RBP12.77□□□□□ -0.37
TOM1-204ENST00000411850 ABCA2Q9BZC7 2435 aa12.76□□□□□ -0.37
TOM1-204ENST00000411850 LY6EQ16553 131 aa12.76□□□□□ -0.37
TOM1-204ENST00000411850 TM2D2Q9BX73 214 aa12.76□□□□□ -0.37
TOM1-204ENST00000411850 KLK15Q9H2R5 256 aa12.76□□□□□ -0.37
TOM1-204ENST00000411850 PHLDA3Q9Y5J5 127 aa12.76□□□□□ -0.37
TOM1-204ENST00000411850 K7ERU9 68 aa12.76□□□□□ -0.37
TOM1-204ENST00000411850 C21orf62-AS1Q17RA5 79 aa12.76□□□□□ -0.37
TOM1-204ENST00000411850 TM4SF20Q53R12 229 aa12.76□□□□□ -0.37
TOM1-204ENST00000411850 TOMM6Q96B49 74 aa12.76□□□□□ -0.37
TOM1-204ENST00000411850 BBC3Q96PG8 261 aaPredicted RBP12.76□□□□□ -0.37
TOM1-204ENST00000411850 COL12A1Q99715 3063 aa12.75□□□□□ -0.37
TOM1-204ENST00000411850 H3BUX3 64 aa12.75□□□□□ -0.37
TOM1-204ENST00000411850 H7C1H1 209 aa12.75□□□□□ -0.37
TOM1-204ENST00000411850 NDUFS8O00217 210 aa12.75□□□□□ -0.37
TOM1-204ENST00000411850 IGHV3-11P01762 117 aa12.75□□□□□ -0.37
TOM1-204ENST00000411850 PRB1P04280 392 aa12.75□□□□□ -0.37
TOM1-204ENST00000411850 DEFB1P60022 68 aa12.75□□□□□ -0.37
TOM1-204ENST00000411850 OR5A1Q8NGJ0 315 aa12.75□□□□□ -0.37
TOM1-204ENST00000411850 SVEP1Q4LDE5 3571 aa12.75□□□□□ -0.37
TOM1-204ENST00000411850 DOPEY1Q5JWR5 2465 aa12.75□□□□□ -0.37
TOM1-204ENST00000411850 IGLV1-40P01703 118 aa12.74□□□□□ -0.37
TOM1-204ENST00000411850 PF4V1P10720 104 aa12.74□□□□□ -0.37
TOM1-204ENST00000411850 RNASE4P34096 147 aaKnown RBP12.74□□□□□ -0.37
TOM1-204ENST00000411850 F8VRH5 84 aa12.74□□□□□ -0.37
TOM1-204ENST00000411850 RPL11P62913 178 aaKnown RBP12.74□□□□□ -0.37
TOM1-204ENST00000411850 CEND1Q8N111 149 aa12.74□□□□□ -0.37
TOM1-204ENST00000411850 C14orf178Q8N769 122 aaPredicted RBP12.74□□□□□ -0.37
TOM1-204ENST00000411850 RHPN1-AS1Q9BWJ2 59 aa12.74□□□□□ -0.37
TOM1-204ENST00000411850 FABP2P12104 132 aa12.73□□□□□ -0.37
TOM1-204ENST00000411850 TAL2Q16559 108 aa12.73□□□□□ -0.37
TOM1-204ENST00000411850 MAPKAPK5-AS1Q8N8E1 139 aa12.73□□□□□ -0.37
TOM1-204ENST00000411850 SCGB3A1Q96QR1 104 aa12.73□□□□□ -0.37
TOM1-204ENST00000411850 SPCS1Q9Y6A9 102 aa12.73□□□□□ -0.37
TOM1-204ENST00000411850 FLNCQ14315 2725 aa12.73□□□□□ -0.37
TOM1-204ENST00000411850 RNF223E7ERA6 249 aa12.73□□□□□ -0.37
TOM1-204ENST00000411850 SAMD5Q5TGI4 173 aa12.73□□□□□ -0.37
TOM1-204ENST00000411850 POM121L12Q8N7R1 296 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms