RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 IBA57Q5T440 356 aaKnown RBP13.56□□□□□ -0.24
CDC42-204ENST00000411827 ISOC2Q96AB3 205 aa13.56□□□□□ -0.24
CDC42-204ENST00000411827 MT-ND4LP03901 98 aa13.55□□□□□ -0.24
CDC42-204ENST00000411827 MIFP14174 115 aa13.55□□□□□ -0.24
CDC42-204ENST00000411827 ADCYAP1P18509 176 aa13.55□□□□□ -0.24
CDC42-204ENST00000411827 SVBPQ8N300 66 aa13.55□□□□□ -0.24
CDC42-204ENST00000411827 SFRP2Q96HF1 295 aa13.55□□□□□ -0.24
CDC42-204ENST00000411827 TM2D3Q9BRN9 247 aa13.55□□□□□ -0.24
CDC42-204ENST00000411827 ZMAT4Q9H898 229 aa13.55□□□□□ -0.24
CDC42-204ENST00000411827 TMEM189A5PLL7 270 aa13.54□□□□□ -0.24
CDC42-204ENST00000411827 OR5I1Q13606 314 aa13.54□□□□□ -0.24
CDC42-204ENST00000411827 RRN3P1Q2M238 152 aa13.54□□□□□ -0.24
CDC42-204ENST00000411827 DNLZQ5SXM8 178 aa13.54□□□□□ -0.24
CDC42-204ENST00000411827 SBSPONQ8IVN8 264 aa13.54□□□□□ -0.24
CDC42-204ENST00000411827 NUDT10Q8NFP7 164 aa13.54□□□□□ -0.24
CDC42-204ENST00000411827 NUDT11Q96G61 164 aa13.54□□□□□ -0.24
CDC42-204ENST00000411827 TP53TG3Q9ULZ0 132 aa13.54□□□□□ -0.24
CDC42-204ENST00000411827 A8MWL6 223 aa13.53□□□□□ -0.24
CDC42-204ENST00000411827 RBMY1A1P0DJD3 496 aaKnown RBP13.53□□□□□ -0.24
CDC42-204ENST00000411827 RBMY1CP0DJD4 496 aa13.53□□□□□ -0.24
CDC42-204ENST00000411827 RBMY1FQ15415 496 aaKnown RBP13.53□□□□□ -0.24
CDC42-204ENST00000411827 OR10G8Q8NGN5 311 aa13.53□□□□□ -0.24
CDC42-204ENST00000411827 OR11H2Q8NH07 326 aa13.53□□□□□ -0.24
CDC42-204ENST00000411827 TMEM263Q8WUH6 116 aaKnown RBP13.53□□□□□ -0.24
CDC42-204ENST00000411827 ANAPC16Q96DE5 110 aa13.53□□□□□ -0.24
CDC42-204ENST00000411827 C16orf74Q96GX8 76 aa13.53□□□□□ -0.24
CDC42-204ENST00000411827 RPP21Q9H633 154 aaKnown RBP13.53□□□□□ -0.24
CDC42-204ENST00000411827 NAGKQ9UJ70 344 aa13.53□□□□□ -0.24
CDC42-204ENST00000411827 IGHV3OR16-12A0A075B7B8 117 aa13.52□□□□□ -0.25
CDC42-204ENST00000411827 FAM231BA6NCW3 169 aa13.52□□□□□ -0.25
CDC42-204ENST00000411827 CBY3A6NI87 242 aa13.52□□□□□ -0.25
CDC42-204ENST00000411827 M0R036 132 aa13.52□□□□□ -0.25
CDC42-204ENST00000411827 GATCO43716 136 aaKnown RBP13.52□□□□□ -0.25
CDC42-204ENST00000411827 SNAPINO95295 136 aa13.52□□□□□ -0.25
CDC42-204ENST00000411827 OR2D3Q8NGH3 330 aa13.52□□□□□ -0.25
CDC42-204ENST00000411827 OVOL2Q9BRP0 275 aa13.52□□□□□ -0.25
CDC42-204ENST00000411827 DNAH3Q8TD57 4116 aa13.51□□□□□ -0.25
CDC42-204ENST00000411827 ZNF705GA8MUZ8 300 aaPredicted RBP13.51□□□□□ -0.25
CDC42-204ENST00000411827 APOC3P02656 99 aa13.51□□□□□ -0.25
CDC42-204ENST00000411827 MED14OSP0DP75 135 aa13.51□□□□□ -0.25
CDC42-204ENST00000411827 RHEBQ15382 184 aa13.51□□□□□ -0.25
CDC42-204ENST00000411827 MUC21Q5SSG8 566 aa13.51□□□□□ -0.25
CDC42-204ENST00000411827 CTDSP1Q9GZU7 261 aa13.51□□□□□ -0.25
CDC42-204ENST00000411827 IGKV3D-20A0A0C4DH25 116 aa13.5□□□□□ -0.25
CDC42-204ENST00000411827 A0A1W2PPQ1 181 aa13.5□□□□□ -0.25
CDC42-204ENST00000411827 ASIPP42127 132 aa13.5□□□□□ -0.25
CDC42-204ENST00000411827 ZNF415Q09FC8 603 aa13.5□□□□□ -0.25
CDC42-204ENST00000411827 SPXQ9BT56 116 aa13.5□□□□□ -0.25
CDC42-204ENST00000411827 GFRA4Q9GZZ7 299 aa13.5□□□□□ -0.25
CDC42-204ENST00000411827 RNASE7Q9H1E1 156 aaKnown RBP13.5□□□□□ -0.25
CDC42-204ENST00000411827 C11orf21Q9P2W6 132 aa13.5□□□□□ -0.25
CDC42-204ENST00000411827 X6R8D5 127 aa13.5□□□□□ -0.25
CDC42-204ENST00000411827 HTN1P15515 57 aa13.49□□□□□ -0.25
CDC42-204ENST00000411827 S100A4P26447 101 aaKnown RBP13.49□□□□□ -0.25
CDC42-204ENST00000411827 TMEM242Q9NWH2 141 aa13.49□□□□□ -0.25
CDC42-204ENST00000411827 A0A087WWC5 75 aa13.48□□□□□ -0.25
CDC42-204ENST00000411827 TEX48A0A1B0GUV7 120 aa13.48□□□□□ -0.25
CDC42-204ENST00000411827 F2Z2F3 143 aa13.48□□□□□ -0.25
CDC42-204ENST00000411827 RNASE8Q8TDE3 154 aaKnown RBP13.48□□□□□ -0.25
CDC42-204ENST00000411827 NDUFAF3Q9BU61 184 aa13.48□□□□□ -0.25
CDC42-204ENST00000411827 IL36BQ9NZH7 164 aa13.48□□□□□ -0.25
CDC42-204ENST00000411827 IGHV3-16A0A0C4DH30 117 aa13.47□□□□□ -0.25
CDC42-204ENST00000411827 SNURFLB1AK76 121 aa13.47□□□□□ -0.25
CDC42-204ENST00000411827 TYMSP04818 313 aa13.47□□□□□ -0.25
CDC42-204ENST00000411827 Q6ZQT7 251 aa13.47□□□□□ -0.25
CDC42-204ENST00000411827 CLRN3Q8NCR9 226 aa13.47□□□□□ -0.25
CDC42-204ENST00000411827 TSKUQ8WUA8 353 aa13.47□□□□□ -0.25
CDC42-204ENST00000411827 PTH2Q96A98 100 aa13.47□□□□□ -0.25
CDC42-204ENST00000411827 OR5AL1P0C617 328 aa13.46□□□□□ -0.25
CDC42-204ENST00000411827 S100A1P23297 94 aa13.46□□□□□ -0.25
CDC42-204ENST00000411827 FOXA3P55318 350 aaPredicted RBP13.46□□□□□ -0.25
CDC42-204ENST00000411827 TCL1AP56279 114 aa13.46□□□□□ -0.25
CDC42-204ENST00000411827 DAZ2Q13117 558 aaKnown RBP13.46□□□□□ -0.25
CDC42-204ENST00000411827 RNF212Q495C1 297 aa13.46□□□□□ -0.25
CDC42-204ENST00000411827 PIK3CD-AS1Q5SR53 167 aa13.46□□□□□ -0.25
CDC42-204ENST00000411827 IMMP2LQ96T52 175 aa13.46□□□□□ -0.25
CDC42-204ENST00000411827 C11orf68Q9H3H3 251 aaKnown RBP13.46□□□□□ -0.25
CDC42-204ENST00000411827 TIMM8BQ9Y5J9 83 aaPredicted RBP13.46□□□□□ -0.25
CDC42-204ENST00000411827 V9GYV3 84 aa13.46□□□□□ -0.25
CDC42-204ENST00000411827 GNRH2O43555 120 aa13.45□□□□□ -0.26
CDC42-204ENST00000411827 LGALS9BQ3B8N2 356 aa13.45□□□□□ -0.26
CDC42-204ENST00000411827 WDR73Q6P4I2 378 aa13.45□□□□□ -0.26
CDC42-204ENST00000411827 Q8NAQ8 132 aa13.45□□□□□ -0.26
CDC42-204ENST00000411827 SSBP4Q9BWG4 385 aaPredicted RBP13.45□□□□□ -0.26
CDC42-204ENST00000411827 C7orf77A4D0Y5 90 aa13.44□□□□□ -0.26
CDC42-204ENST00000411827 FER1L6-AS1Q8NA97 138 aa13.44□□□□□ -0.26
CDC42-204ENST00000411827 C11orf72Q8NBR9 251 aa13.44□□□□□ -0.26
CDC42-204ENST00000411827 TMSB15BA0A087X1C1 80 aa13.43□□□□□ -0.26
CDC42-204ENST00000411827 IGHV4-28A0A0C4DH34 117 aa13.43□□□□□ -0.26
CDC42-204ENST00000411827 LYRM9A8MSI8 78 aa13.43□□□□□ -0.26
CDC42-204ENST00000411827 IGLC6P0CF74 106 aa13.43□□□□□ -0.26
CDC42-204ENST00000411827 AZU1P20160 251 aa13.43□□□□□ -0.26
CDC42-204ENST00000411827 RPL19P84098 196 aaKnown RBP13.43□□□□□ -0.26
CDC42-204ENST00000411827 C9orf85Q96MD7 179 aa13.43□□□□□ -0.26
CDC42-204ENST00000411827 SCRT2Q9NQ03 307 aa13.43□□□□□ -0.26
CDC42-204ENST00000411827 GSN-AS1Q9NRJ2 163 aa13.43□□□□□ -0.26
CDC42-204ENST00000411827 NAT8BQ9UHF3 227 aa13.43□□□□□ -0.26
CDC42-204ENST00000411827 SMIM27A0A1W2PRY6 76 aa13.42□□□□□ -0.26
CDC42-204ENST00000411827 CXorf65A6NEN9 183 aa13.42□□□□□ -0.26
CDC42-204ENST00000411827 M0R2P5 195 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms