RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 NDUFAF3Q9BU61 184 aa8.43□□□□□ -1.06
NEDD1-202ENST00000411739 HOXA5P20719 270 aa8.43□□□□□ -1.06
NEDD1-202ENST00000411739 AKR1C3P42330 323 aa8.43□□□□□ -1.06
NEDD1-202ENST00000411739 PPT1P50897 306 aa8.43□□□□□ -1.06
NEDD1-202ENST00000411739 TRGV2A0A075B6R0 118 aa8.42□□□□□ -1.06
NEDD1-202ENST00000411739 TYMSP04818 313 aa8.42□□□□□ -1.06
NEDD1-202ENST00000411739 UBE2G1P62253 170 aa8.42□□□□□ -1.06
NEDD1-202ENST00000411739 SAPCD1Q5SSQ6 148 aa8.42□□□□□ -1.06
NEDD1-202ENST00000411739 LINC00612Q8N6U2 182 aa8.42□□□□□ -1.06
NEDD1-202ENST00000411739 A0A0J9YY99 117 aa8.42□□□□□ -1.06
NEDD1-202ENST00000411739 SPINK4O60575 86 aa8.42□□□□□ -1.06
NEDD1-202ENST00000411739 CRIP1P50238 77 aa8.42□□□□□ -1.06
NEDD1-202ENST00000411739 ZNF415Q09FC8 603 aa8.42□□□□□ -1.06
NEDD1-202ENST00000411739 ZC2HC1AQ96GY0 325 aa8.42□□□□□ -1.06
NEDD1-202ENST00000411739 TRAV1-1A0A0B4J248 108 aa8.41□□□□□ -1.06
NEDD1-202ENST00000411739 IGHV3-16A0A0C4DH30 117 aa8.41□□□□□ -1.06
NEDD1-202ENST00000411739 PFN1P07737 140 aaKnown RBP8.41□□□□□ -1.06
NEDD1-202ENST00000411739 IBA57Q5T440 356 aaKnown RBP8.41□□□□□ -1.06
NEDD1-202ENST00000411739 KMT2AQ03164 3969 aa8.41□□□□□ -1.06
NEDD1-202ENST00000411739 DERL1Q9BUN8 251 aa8.41□□□□□ -1.06
NEDD1-202ENST00000411739 SDF2L1Q9HCN8 221 aa8.41□□□□□ -1.06
NEDD1-202ENST00000411739 TRGV11A0A075B6L2 103 aa8.4□□□□□ -1.06
NEDD1-202ENST00000411739 M0R036 132 aa8.4□□□□□ -1.06
NEDD1-202ENST00000411739 NUDT3O95989 172 aa8.4□□□□□ -1.06
NEDD1-202ENST00000411739 TDRG1Q3Y452 100 aa8.4□□□□□ -1.06
NEDD1-202ENST00000411739 LGALS9CQ6DKI2 356 aa8.4□□□□□ -1.06
NEDD1-202ENST00000411739 FMC1Q96HJ9 113 aa8.4□□□□□ -1.06
NEDD1-202ENST00000411739 VPS13DQ5THJ4 4388 aa8.4□□□□□ -1.06
NEDD1-202ENST00000411739 TRAV26-1A0A087WT03 109 aa8.4□□□□□ -1.07
NEDD1-202ENST00000411739 SFTA3P0C7M3 94 aa8.4□□□□□ -1.07
NEDD1-202ENST00000411739 IGKV3D-20A0A0C4DH25 116 aa8.39□□□□□ -1.07
NEDD1-202ENST00000411739 FBLL1A6NHQ2 334 aaKnown RBP8.39□□□□□ -1.07
NEDD1-202ENST00000411739 TCTAP57738 103 aa8.39□□□□□ -1.07
NEDD1-202ENST00000411739 MANBALQ9NQG1 85 aa8.39□□□□□ -1.07
NEDD1-202ENST00000411739 NACAE9PAV3 2078 aa8.39□□□□□ -1.07
NEDD1-202ENST00000411739 TMSB15BA0A087X1C1 80 aa8.39□□□□□ -1.07
NEDD1-202ENST00000411739 TEX46H3BTG2 121 aa8.39□□□□□ -1.07
NEDD1-202ENST00000411739 SH2D1AO60880 128 aa8.39□□□□□ -1.07
NEDD1-202ENST00000411739 LTAP01374 205 aa8.39□□□□□ -1.07
NEDD1-202ENST00000411739 ORM1P02763 201 aa8.39□□□□□ -1.07
NEDD1-202ENST00000411739 PCNPQ8WW12 178 aaKnown RBP8.39□□□□□ -1.07
NEDD1-202ENST00000411739 GRIFINA4D1Z8 144 aa8.38□□□□□ -1.07
NEDD1-202ENST00000411739 FABP5P3A8MUU1 101 aa8.38□□□□□ -1.07
NEDD1-202ENST00000411739 C9JCJ5 164 aa8.38□□□□□ -1.07
NEDD1-202ENST00000411739 KCNS1Q96KK3 526 aa8.38□□□□□ -1.07
NEDD1-202ENST00000411739 ZFP30Q9Y2G7 519 aa8.38□□□□□ -1.07
NEDD1-202ENST00000411739 RPL35P42766 123 aaKnown RBP8.38□□□□□ -1.07
NEDD1-202ENST00000411739 BAGE2Q86Y30 109 aa8.38□□□□□ -1.07
NEDD1-202ENST00000411739 RAB19A4D1S5 217 aa8.37□□□□□ -1.07
NEDD1-202ENST00000411739 LGALS9BQ3B8N2 356 aa8.37□□□□□ -1.07
NEDD1-202ENST00000411739 POM121L12Q8N7R1 296 aa8.37□□□□□ -1.07
NEDD1-202ENST00000411739 ZNF479Q96JC4 524 aa8.37□□□□□ -1.07
NEDD1-202ENST00000411739 FAM210BQ96KR6 192 aa8.37□□□□□ -1.07
NEDD1-202ENST00000411739 TCEAL7Q9BRU2 100 aa8.37□□□□□ -1.07
NEDD1-202ENST00000411739 MUC4Q99102 2169 aa8.37□□□□□ -1.07
NEDD1-202ENST00000411739 BCL2P10415 239 aa8.37□□□□□ -1.07
NEDD1-202ENST00000411739 PRR27Q6MZM9 219 aa8.37□□□□□ -1.07
NEDD1-202ENST00000411739 SPXQ9BT56 116 aa8.37□□□□□ -1.07
NEDD1-202ENST00000411739 B4DEV8 164 aa8.36□□□□□ -1.07
NEDD1-202ENST00000411739 M0R2P5 195 aa8.36□□□□□ -1.07
NEDD1-202ENST00000411739 RNASE3P12724 160 aaKnown RBP8.36□□□□□ -1.07
NEDD1-202ENST00000411739 RPL19P84098 196 aaKnown RBP8.36□□□□□ -1.07
NEDD1-202ENST00000411739 MEF2BQ02080 365 aaPredicted RBP8.36□□□□□ -1.07
NEDD1-202ENST00000411739 FAM162BQ5T6X4 162 aa8.36□□□□□ -1.07
NEDD1-202ENST00000411739 VSIG2Q96IQ7 327 aa8.36□□□□□ -1.07
NEDD1-202ENST00000411739 TRBV6-1A0A0K0K1D8 114 aa8.36□□□□□ -1.07
NEDD1-202ENST00000411739 IFNA1P01562 189 aa8.36□□□□□ -1.07
NEDD1-202ENST00000411739 ZNF674Q2M3X9 581 aa8.36□□□□□ -1.07
NEDD1-202ENST00000411739 ZNF575Q86XF7 245 aa8.36□□□□□ -1.07
NEDD1-202ENST00000411739 UBE2DNLQ8IWF7 75 aa8.36□□□□□ -1.07
NEDD1-202ENST00000411739 RASL10AQ92737 203 aa8.36□□□□□ -1.07
NEDD1-202ENST00000411739 MED9Q9NWA0 146 aa8.36□□□□□ -1.07
NEDD1-202ENST00000411739 PGPEP1LA6NFU8 196 aa8.35□□□□□ -1.07
NEDD1-202ENST00000411739 S100A4P26447 101 aaKnown RBP8.35□□□□□ -1.07
NEDD1-202ENST00000411739 BLOC1S1P78537 153 aa8.35□□□□□ -1.07
NEDD1-202ENST00000411739 FHL2Q14192 279 aa8.35□□□□□ -1.07
NEDD1-202ENST00000411739 ZNF876PQ49A33 203 aa8.35□□□□□ -1.07
NEDD1-202ENST00000411739 IGHV3-73A0A0B4J1V6 119 aa8.35□□□□□ -1.07
NEDD1-202ENST00000411739 KRBOX1C9JBD0 128 aa8.35□□□□□ -1.07
NEDD1-202ENST00000411739 H3BVH4 76 aa8.35□□□□□ -1.07
NEDD1-202ENST00000411739 M0R2N4 97 aa8.35□□□□□ -1.07
NEDD1-202ENST00000411739 P0DMU3 169 aa8.35□□□□□ -1.07
NEDD1-202ENST00000411739 FAM231AP0DMU4 169 aa8.35□□□□□ -1.07
NEDD1-202ENST00000411739 FAM231CP0DMU5 169 aa8.35□□□□□ -1.07
NEDD1-202ENST00000411739 CENPWQ5EE01 88 aa8.35□□□□□ -1.07
NEDD1-202ENST00000411739 COX8CQ7Z4L0 72 aa8.35□□□□□ -1.07
NEDD1-202ENST00000411739 C11orf52Q96A22 123 aa8.35□□□□□ -1.07
NEDD1-202ENST00000411739 C9orf85Q96MD7 179 aa8.35□□□□□ -1.07
NEDD1-202ENST00000411739 MLST8Q9BVC4 326 aa8.35□□□□□ -1.07
NEDD1-202ENST00000411739 VAX2Q9UIW0 290 aa8.35□□□□□ -1.07
NEDD1-202ENST00000411739 IGLV2-18A0A075B6J9 118 aa8.34□□□□□ -1.07
NEDD1-202ENST00000411739 A0A096LPF7 62 aa8.34□□□□□ -1.07
NEDD1-202ENST00000411739 TRGV4A0A0C4DH28 118 aa8.34□□□□□ -1.07
NEDD1-202ENST00000411739 C15orf53Q8NAA6 179 aa8.34□□□□□ -1.07
NEDD1-202ENST00000411739 C18orf15Q96N68 181 aa8.34□□□□□ -1.07
NEDD1-202ENST00000411739 S100A9P06702 114 aaKnown RBP8.34□□□□□ -1.08
NEDD1-202ENST00000411739 MGST1P10620 155 aaKnown RBP8.34□□□□□ -1.08
NEDD1-202ENST00000411739 ASIPP42127 132 aa8.34□□□□□ -1.08
NEDD1-202ENST00000411739 OR4C5Q8NGB2 326 aa8.34□□□□□ -1.08
NEDD1-202ENST00000411739 HHLA3Q9XRX5 114 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms