RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 TMEM30CPA0ZSE6 113 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 TPST1O60507 370 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 EDF1O60869 148 aaKnown RBP-0.27□□□□□ -2.45
PMS1-203ENST00000409593 IL7P13232 177 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 BASP1P80723 227 aaKnown RBP-0.27□□□□□ -2.45
PMS1-203ENST00000409593 KLKP1Q107X0 134 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 CCSMST1Q4G0I0 132 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 LINC00305Q7Z4B0 112 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 CROCCP2Q86T23 111 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 BIN3Q9NQY0 253 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 TMEM14BQ9NUH8 114 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 LAMTOR3Q9UHA4 124 aa-0.27□□□□□ -2.45
PMS1-203ENST00000409593 UNC13BO14795 1591 aa-0.28□□□□□ -2.45
PMS1-203ENST00000409593 DLEC1Q9Y238 1755 aa-0.28□□□□□ -2.45
PMS1-203ENST00000409593 PTPRGP23470 1445 aa-0.28□□□□□ -2.45
PMS1-203ENST00000409593 LRP5O75197 1615 aa-0.28□□□□□ -2.45
PMS1-203ENST00000409593 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.28□□□□□ -2.45
PMS1-203ENST00000409593 TRAV13-1A0A0B4J241 112 aa-0.28□□□□□ -2.45
PMS1-203ENST00000409593 LOC107984640A0A0U1RRK4 108 aa-0.28□□□□□ -2.45
PMS1-203ENST00000409593 LOC107986453A0A1B0GWG9 222 aa-0.28□□□□□ -2.45
PMS1-203ENST00000409593 TMEM189A5PLL7 270 aa-0.28□□□□□ -2.45
PMS1-203ENST00000409593 MAP1LC3B2A6NCE7 125 aa-0.28□□□□□ -2.45
PMS1-203ENST00000409593 C10orf142B7Z368 130 aa-0.28□□□□□ -2.45
PMS1-203ENST00000409593 MPC1LP0DKB6 136 aa-0.28□□□□□ -2.45
PMS1-203ENST00000409593 GTF2A1P52655 376 aaPredicted RBP-0.28□□□□□ -2.45
PMS1-203ENST00000409593 BLCAPP62952 87 aa-0.28□□□□□ -2.45
PMS1-203ENST00000409593 IQCJQ1A5X6 159 aa-0.28□□□□□ -2.45
PMS1-203ENST00000409593 C3orf33Q6P1S2 294 aa-0.28□□□□□ -2.45
PMS1-203ENST00000409593 STX12Q86Y82 276 aa-0.28□□□□□ -2.45
PMS1-203ENST00000409593 OR5A2Q8NGI9 324 aa-0.28□□□□□ -2.45
PMS1-203ENST00000409593 CDC26Q8NHZ8 85 aa-0.28□□□□□ -2.45
PMS1-203ENST00000409593 DMAC1Q96GE9 116 aa-0.28□□□□□ -2.45
PMS1-203ENST00000409593 CBLN4Q9NTU7 201 aa-0.28□□□□□ -2.45
PMS1-203ENST00000409593 GID8Q9NWU2 228 aa-0.28□□□□□ -2.45
PMS1-203ENST00000409593 MED31Q9Y3C7 131 aa-0.28□□□□□ -2.45
PMS1-203ENST00000409593 BSNQ9UPA5 3926 aa-0.28□□□□□ -2.45
PMS1-203ENST00000409593 STAB2Q8WWQ8 2551 aa-0.28□□□□□ -2.45
PMS1-203ENST00000409593 ABCA4P78363 2273 aa-0.29□□□□□ -2.46
PMS1-203ENST00000409593 HSPG2P98160 4391 aa-0.29□□□□□ -2.46
PMS1-203ENST00000409593 A0A0G2JMM0 328 aa-0.29□□□□□ -2.46
PMS1-203ENST00000409593 PPP5D1E7EU14 171 aa-0.29□□□□□ -2.46
PMS1-203ENST00000409593 H3BMG7 143 aa-0.29□□□□□ -2.46
PMS1-203ENST00000409593 RPL7P18124 248 aaKnown RBP-0.29□□□□□ -2.46
PMS1-203ENST00000409593 CRYGSP22914 178 aa-0.29□□□□□ -2.46
PMS1-203ENST00000409593 G0S2P27469 103 aa-0.29□□□□□ -2.46
PMS1-203ENST00000409593 RHOHQ15669 191 aa-0.29□□□□□ -2.46
PMS1-203ENST00000409593 OR8J3Q8NGG0 315 aa-0.29□□□□□ -2.46
PMS1-203ENST00000409593 NAT14Q8WUY8 206 aa-0.29□□□□□ -2.46
PMS1-203ENST00000409593 SONP18583 2426 aaKnown RBP-0.29□□□□□ -2.46
PMS1-203ENST00000409593 FER1L6Q2WGJ9 1857 aa-0.3□□□□□ -2.46
PMS1-203ENST00000409593 KIDINS220Q9ULH0 1771 aa-0.3□□□□□ -2.46
PMS1-203ENST00000409593 TNXBP22105 4242 aa-0.3□□□□□ -2.46
PMS1-203ENST00000409593 IFITM5A6NNB3 132 aa-0.3□□□□□ -2.46
PMS1-203ENST00000409593 M0QZK8 103 aa-0.3□□□□□ -2.46
PMS1-203ENST00000409593 GNG10P50151 68 aa-0.3□□□□□ -2.46
PMS1-203ENST00000409593 POLR2HP52434 150 aaKnown RBP-0.3□□□□□ -2.46
PMS1-203ENST00000409593 Q5XG85 94 aa-0.3□□□□□ -2.46
PMS1-203ENST00000409593 OTOSQ8NHW6 89 aa-0.3□□□□□ -2.46
PMS1-203ENST00000409593 THEM6Q8WUY1 208 aa-0.3□□□□□ -2.46
PMS1-203ENST00000409593 NINQ8N4C6 2090 aa-0.3□□□□□ -2.46
PMS1-203ENST00000409593 ABCA2Q9BZC7 2435 aa-0.3□□□□□ -2.46
PMS1-203ENST00000409593 CADP27708 2225 aa-0.3□□□□□ -2.46
PMS1-203ENST00000409593 LRP2P98164 4655 aa-0.3□□□□□ -2.46
PMS1-203ENST00000409593 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.3□□□□□ -2.46
PMS1-203ENST00000409593 TFF1P04155 84 aa-0.3□□□□□ -2.46
PMS1-203ENST00000409593 CCKP06307 115 aa-0.3□□□□□ -2.46
PMS1-203ENST00000409593 EMX2Q04743 252 aa-0.3□□□□□ -2.46
PMS1-203ENST00000409593 KRTAP19-7Q3SYF9 63 aa-0.3□□□□□ -2.46
PMS1-203ENST00000409593 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.3□□□□□ -2.46
PMS1-203ENST00000409593 FAM213BQ8TBF2 198 aa-0.3□□□□□ -2.46
PMS1-203ENST00000409593 BRK1Q8WUW1 75 aa-0.3□□□□□ -2.46
PMS1-203ENST00000409593 SMIM7Q9BQ49 75 aa-0.3□□□□□ -2.46
PMS1-203ENST00000409593 ATG5Q9H1Y0 275 aa-0.3□□□□□ -2.46
PMS1-203ENST00000409593 TRAPPC2LQ9UL33 140 aa-0.3□□□□□ -2.46
PMS1-203ENST00000409593 LAMTOR2Q9Y2Q5 125 aa-0.3□□□□□ -2.46
PMS1-203ENST00000409593 MED13LQ71F56 2210 aa-0.31□□□□□ -2.46
PMS1-203ENST00000409593 SOGA1O94964 1423 aa-0.31□□□□□ -2.46
PMS1-203ENST00000409593 HYDINQ4G0P3 5121 aa-0.31□□□□□ -2.46
PMS1-203ENST00000409593 TNS1Q9HBL0 1735 aaKnown RBP-0.31□□□□□ -2.46
PMS1-203ENST00000409593 F5P12259 2224 aa-0.31□□□□□ -2.46
PMS1-203ENST00000409593 HBDP02042 147 aa-0.31□□□□□ -2.46
PMS1-203ENST00000409593 ADCYAP1P18509 176 aa-0.31□□□□□ -2.46
PMS1-203ENST00000409593 SPRR2DP22532 72 aa-0.31□□□□□ -2.46
PMS1-203ENST00000409593 PPP1R2P3Q6NXS1 205 aa-0.31□□□□□ -2.46
PMS1-203ENST00000409593 OR4S1Q8NGB4 309 aa-0.31□□□□□ -2.46
PMS1-203ENST00000409593 SPAG17Q6Q759 2223 aa-0.31□□□□□ -2.46
PMS1-203ENST00000409593 LAMC3Q9Y6N6 1575 aa-0.31□□□□□ -2.46
PMS1-203ENST00000409593 MYCBP2O75592 4640 aa-0.31□□□□□ -2.46
PMS1-203ENST00000409593 A2MP01023 1474 aa-0.32□□□□□ -2.46
PMS1-203ENST00000409593 HIVEP1P15822 2718 aa-0.32□□□□□ -2.46
PMS1-203ENST00000409593 ROCK1Q13464 1354 aa-0.32□□□□□ -2.46
PMS1-203ENST00000409593 MYO7AQ13402 2215 aa-0.32□□□□□ -2.46
PMS1-203ENST00000409593 CXorf51AA0A1B0GTR3 108 aa-0.32□□□□□ -2.46
PMS1-203ENST00000409593 SLC25A5P05141 298 aaKnown RBP-0.32□□□□□ -2.46
PMS1-203ENST00000409593 PYYP10082 97 aa-0.32□□□□□ -2.46
PMS1-203ENST00000409593 ETV6P41212 452 aa-0.32□□□□□ -2.46
PMS1-203ENST00000409593 TRIQKQ629K1 86 aa-0.32□□□□□ -2.46
PMS1-203ENST00000409593 IDO2Q6ZQW0 420 aa-0.32□□□□□ -2.46
PMS1-203ENST00000409593 LXNQ9BS40 222 aa-0.32□□□□□ -2.46
PMS1-203ENST00000409593 CCDC32Q9BV29 185 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms