RNA–Protein interactions for RNA: ENST00000409486.6

PPM1B-207, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 1 (best)

Gene PPM1B, Length 1,481 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-207ENST00000409486 NUDT3O95989 172 aa13.48□□□□□ -0.25
PPM1B-207ENST00000409486 NHLRC2Q8NBF2 726 aa13.48□□□□□ -0.25
PPM1B-207ENST00000409486 HIST1H2BAQ96A08 127 aa13.48□□□□□ -0.25
PPM1B-207ENST00000409486 RAB5CP51148 216 aa13.47□□□□□ -0.25
PPM1B-207ENST00000409486 DAZ2Q13117 558 aaKnown RBP13.47□□□□□ -0.25
PPM1B-207ENST00000409486 SDF2L1Q9HCN8 221 aa13.47□□□□□ -0.25
PPM1B-207ENST00000409486 TYMSP04818 313 aa13.46□□□□□ -0.25
PPM1B-207ENST00000409486 SAPCD1Q5SSQ6 148 aa13.46□□□□□ -0.25
PPM1B-207ENST00000409486 UBE2DNLQ8IWF7 75 aa13.46□□□□□ -0.25
PPM1B-207ENST00000409486 SACSQ9NZJ4 4579 aa13.46□□□□□ -0.26
PPM1B-207ENST00000409486 TEX46H3BTG2 121 aa13.45□□□□□ -0.26
PPM1B-207ENST00000409486 TCTAP57738 103 aa13.45□□□□□ -0.26
PPM1B-207ENST00000409486 IBA57Q5T440 356 aaKnown RBP13.45□□□□□ -0.26
PPM1B-207ENST00000409486 FMC1Q96HJ9 113 aa13.45□□□□□ -0.26
PPM1B-207ENST00000409486 C11orf21Q9P2W6 132 aa13.45□□□□□ -0.26
PPM1B-207ENST00000409486 SPINK4O60575 86 aa13.44□□□□□ -0.26
PPM1B-207ENST00000409486 PFN1P07737 140 aaKnown RBP13.44□□□□□ -0.26
PPM1B-207ENST00000409486 HOXA5P20719 270 aa13.44□□□□□ -0.26
PPM1B-207ENST00000409486 LGALS9CQ6DKI2 356 aa13.44□□□□□ -0.26
PPM1B-207ENST00000409486 RYR2Q92736 4967 aa13.44□□□□□ -0.26
PPM1B-207ENST00000409486 TRAV26-1A0A087WT03 109 aa13.43□□□□□ -0.26
PPM1B-207ENST00000409486 FBLL1A6NHQ2 334 aaKnown RBP13.43□□□□□ -0.26
PPM1B-207ENST00000409486 ZC2HC1AQ96GY0 325 aa13.43□□□□□ -0.26
PPM1B-207ENST00000409486 MANBALQ9NQG1 85 aa13.43□□□□□ -0.26
PPM1B-207ENST00000409486 IGHV3-16A0A0C4DH30 117 aa13.42□□□□□ -0.26
PPM1B-207ENST00000409486 M0R036 132 aa13.42□□□□□ -0.26
PPM1B-207ENST00000409486 LINC00612Q8N6U2 182 aa13.42□□□□□ -0.26
PPM1B-207ENST00000409486 KCNS1Q96KK3 526 aa13.42□□□□□ -0.26
PPM1B-207ENST00000409486 HYDINQ4G0P3 5121 aa13.42□□□□□ -0.26
PPM1B-207ENST00000409486 C9JCJ5 164 aa13.42□□□□□ -0.26
PPM1B-207ENST00000409486 ORM1P02763 201 aa13.42□□□□□ -0.26
PPM1B-207ENST00000409486 IFITM2Q01629 132 aa13.42□□□□□ -0.26
PPM1B-207ENST00000409486 TMSB15BA0A087X1C1 80 aa13.41□□□□□ -0.26
PPM1B-207ENST00000409486 SFTA3P0C7M3 94 aa13.41□□□□□ -0.26
PPM1B-207ENST00000409486 FAM210BQ96KR6 192 aa13.41□□□□□ -0.26
PPM1B-207ENST00000409486 SH2D1AO60880 128 aa13.4□□□□□ -0.26
PPM1B-207ENST00000409486 IFNA1P01562 189 aa13.4□□□□□ -0.26
PPM1B-207ENST00000409486 TCEAL7Q9BRU2 100 aa13.4□□□□□ -0.26
PPM1B-207ENST00000409486 TRAV1-1A0A0B4J248 108 aa13.39□□□□□ -0.27
PPM1B-207ENST00000409486 FABP5P3A8MUU1 101 aa13.39□□□□□ -0.27
PPM1B-207ENST00000409486 P0DMU3 169 aa13.39□□□□□ -0.27
PPM1B-207ENST00000409486 FAM231AP0DMU4 169 aa13.39□□□□□ -0.27
PPM1B-207ENST00000409486 FAM231CP0DMU5 169 aa13.39□□□□□ -0.27
PPM1B-207ENST00000409486 S100A4P26447 101 aaKnown RBP13.39□□□□□ -0.27
PPM1B-207ENST00000409486 TDRG1Q3Y452 100 aa13.39□□□□□ -0.27
PPM1B-207ENST00000409486 PRR27Q6MZM9 219 aa13.39□□□□□ -0.27
PPM1B-207ENST00000409486 SPXQ9BT56 116 aa13.39□□□□□ -0.27
PPM1B-207ENST00000409486 DERL1Q9BUN8 251 aa13.39□□□□□ -0.27
PPM1B-207ENST00000409486 ZFP30Q9Y2G7 519 aa13.39□□□□□ -0.27
PPM1B-207ENST00000409486 GRIFINA4D1Z8 144 aa13.38□□□□□ -0.27
PPM1B-207ENST00000409486 B4DEV8 164 aa13.38□□□□□ -0.27
PPM1B-207ENST00000409486 LTAP01374 205 aa13.38□□□□□ -0.27
PPM1B-207ENST00000409486 C15orf53Q8NAA6 179 aa13.38□□□□□ -0.27
PPM1B-207ENST00000409486 DNAH1Q9P2D7 4330 aa13.38□□□□□ -0.27
PPM1B-207ENST00000409486 TRGV4A0A0C4DH28 118 aa13.37□□□□□ -0.27
PPM1B-207ENST00000409486 M0R2P5 195 aa13.37□□□□□ -0.27
PPM1B-207ENST00000409486 CRIP1P50238 77 aa13.37□□□□□ -0.27
PPM1B-207ENST00000409486 LGALS9BQ3B8N2 356 aa13.37□□□□□ -0.27
PPM1B-207ENST00000409486 FAM162BQ5T6X4 162 aa13.37□□□□□ -0.27
PPM1B-207ENST00000409486 BAGE2Q86Y30 109 aa13.37□□□□□ -0.27
PPM1B-207ENST00000409486 IGLV2-18A0A075B6J9 118 aa13.36□□□□□ -0.27
PPM1B-207ENST00000409486 IGKV3D-20A0A0C4DH25 116 aa13.36□□□□□ -0.27
PPM1B-207ENST00000409486 M0R2N4 97 aa13.36□□□□□ -0.27
PPM1B-207ENST00000409486 BCL2P10415 239 aa13.36□□□□□ -0.27
PPM1B-207ENST00000409486 RPL35P42766 123 aaKnown RBP13.36□□□□□ -0.27
PPM1B-207ENST00000409486 ZNF479Q96JC4 524 aa13.36□□□□□ -0.27
PPM1B-207ENST00000409486 NACAE9PAV3 2078 aa13.36□□□□□ -0.27
PPM1B-207ENST00000409486 H3BVH4 76 aa13.36□□□□□ -0.27
PPM1B-207ENST00000409486 ASIPP42127 132 aa13.36□□□□□ -0.27
PPM1B-207ENST00000409486 IGHV3-73A0A0B4J1V6 119 aa13.35□□□□□ -0.27
PPM1B-207ENST00000409486 RAB19A4D1S5 217 aa13.35□□□□□ -0.27
PPM1B-207ENST00000409486 MGST1P10620 155 aaKnown RBP13.35□□□□□ -0.27
PPM1B-207ENST00000409486 BLOC1S1P78537 153 aa13.35□□□□□ -0.27
PPM1B-207ENST00000409486 MEF2BQ02080 365 aaPredicted RBP13.35□□□□□ -0.27
PPM1B-207ENST00000409486 ZNF876PQ49A33 203 aa13.35□□□□□ -0.27
PPM1B-207ENST00000409486 POM121L12Q8N7R1 296 aa13.35□□□□□ -0.27
PPM1B-207ENST00000409486 OR4C5Q8NGB2 326 aa13.35□□□□□ -0.27
PPM1B-207ENST00000409486 PCNPQ8WW12 178 aaKnown RBP13.35□□□□□ -0.27
PPM1B-207ENST00000409486 MED9Q9NWA0 146 aa13.35□□□□□ -0.27
PPM1B-207ENST00000409486 A0A096LPF7 62 aa13.34□□□□□ -0.27
PPM1B-207ENST00000409486 TRBV6-1A0A0K0K1D8 114 aa13.34□□□□□ -0.27
PPM1B-207ENST00000409486 PAX4O43316 350 aa13.34□□□□□ -0.27
PPM1B-207ENST00000409486 S100A9P06702 114 aaKnown RBP13.34□□□□□ -0.27
PPM1B-207ENST00000409486 CENPWQ5EE01 88 aa13.34□□□□□ -0.27
PPM1B-207ENST00000409486 TEX261Q6UWH6 196 aa13.34□□□□□ -0.27
PPM1B-207ENST00000409486 VAX2Q9UIW0 290 aa13.34□□□□□ -0.27
PPM1B-207ENST00000409486 CEBPGP53567 150 aa13.33□□□□□ -0.28
PPM1B-207ENST00000409486 RPL19P84098 196 aaKnown RBP13.33□□□□□ -0.28
PPM1B-207ENST00000409486 RASL10AQ92737 203 aa13.33□□□□□ -0.28
PPM1B-207ENST00000409486 MUC4Q99102 2169 aa13.33□□□□□ -0.28
PPM1B-207ENST00000409486 PGPEP1LA6NFU8 196 aa13.32□□□□□ -0.28
PPM1B-207ENST00000409486 KRBOX1C9JBD0 128 aa13.32□□□□□ -0.28
PPM1B-207ENST00000409486 RNASE3P12724 160 aaKnown RBP13.32□□□□□ -0.28
PPM1B-207ENST00000409486 FHL2Q14192 279 aa13.32□□□□□ -0.28
PPM1B-207ENST00000409486 ZNF674Q2M3X9 581 aa13.32□□□□□ -0.28
PPM1B-207ENST00000409486 VSIG2Q96IQ7 327 aa13.32□□□□□ -0.28
PPM1B-207ENST00000409486 C9orf85Q96MD7 179 aa13.32□□□□□ -0.28
PPM1B-207ENST00000409486 HHLA3Q9XRX5 114 aa13.32□□□□□ -0.28
PPM1B-207ENST00000409486 PDE6DO43924 150 aa13.31□□□□□ -0.28
PPM1B-207ENST00000409486 ZNF506Q5JVG8 444 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms