RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 GAGE7O76087 117 aa14.02□□□□□ -0.16
PDLIM2-207ENST00000409417 LTAP01374 205 aa14.02□□□□□ -0.16
PDLIM2-207ENST00000409417 S100A9P06702 114 aaKnown RBP14.02□□□□□ -0.16
PDLIM2-207ENST00000409417 GAGE12FP0CL80 117 aa14.02□□□□□ -0.16
PDLIM2-207ENST00000409417 GAGE12GP0CL81 117 aa14.02□□□□□ -0.16
PDLIM2-207ENST00000409417 GAGE12IP0CL82 117 aa14.02□□□□□ -0.16
PDLIM2-207ENST00000409417 COX8CQ7Z4L0 72 aa14.02□□□□□ -0.16
PDLIM2-207ENST00000409417 SDF2L1Q9HCN8 221 aa14.02□□□□□ -0.16
PDLIM2-207ENST00000409417 LYSTQ99698 3801 aa14.02□□□□□ -0.17
PDLIM2-207ENST00000409417 SPINK4O60575 86 aa14.01□□□□□ -0.17
PDLIM2-207ENST00000409417 BLOC1S1P78537 153 aa14.01□□□□□ -0.17
PDLIM2-207ENST00000409417 LGALS9BQ3B8N2 356 aa14.01□□□□□ -0.17
PDLIM2-207ENST00000409417 LINC00476Q8WZB0 136 aa14.01□□□□□ -0.17
PDLIM2-207ENST00000409417 NDUFAF3Q9BU61 184 aa14.01□□□□□ -0.17
PDLIM2-207ENST00000409417 TRGV1A0A0A0MS02 117 aa14□□□□□ -0.17
PDLIM2-207ENST00000409417 GNRH2O43555 120 aa14□□□□□ -0.17
PDLIM2-207ENST00000409417 IFNA1P01562 189 aa14□□□□□ -0.17
PDLIM2-207ENST00000409417 C11orf21Q9P2W6 132 aa14□□□□□ -0.17
PDLIM2-207ENST00000409417 SACSQ9NZJ4 4579 aa14□□□□□ -0.17
PDLIM2-207ENST00000409417 IGHV3-16A0A0C4DH30 117 aa13.99□□□□□ -0.17
PDLIM2-207ENST00000409417 F5H768 121 aa13.99□□□□□ -0.17
PDLIM2-207ENST00000409417 C18orf15Q96N68 181 aa13.99□□□□□ -0.17
PDLIM2-207ENST00000409417 SPXQ9BT56 116 aa13.99□□□□□ -0.17
PDLIM2-207ENST00000409417 TRGV2A0A075B6R0 118 aa13.99□□□□□ -0.17
PDLIM2-207ENST00000409417 FABP5P3A8MUU1 101 aa13.99□□□□□ -0.17
PDLIM2-207ENST00000409417 TYMSP04818 313 aa13.99□□□□□ -0.17
PDLIM2-207ENST00000409417 BCL2P10415 239 aa13.99□□□□□ -0.17
PDLIM2-207ENST00000409417 MEF2BQ02080 365 aaPredicted RBP13.99□□□□□ -0.17
PDLIM2-207ENST00000409417 C11orf52Q96A22 123 aa13.99□□□□□ -0.17
PDLIM2-207ENST00000409417 ZC2HC1AQ96GY0 325 aa13.99□□□□□ -0.17
PDLIM2-207ENST00000409417 RYR3Q15413 4870 aa13.98□□□□□ -0.17
PDLIM2-207ENST00000409417 TAGLN2P37802 199 aaKnown RBP13.98□□□□□ -0.17
PDLIM2-207ENST00000409417 TMEM88Q6PEY1 159 aa13.98□□□□□ -0.17
PDLIM2-207ENST00000409417 PDE6DO43924 150 aa13.97□□□□□ -0.17
PDLIM2-207ENST00000409417 CRIP1P50238 77 aa13.97□□□□□ -0.17
PDLIM2-207ENST00000409417 FAM162BQ5T6X4 162 aa13.97□□□□□ -0.17
PDLIM2-207ENST00000409417 LGALS9CQ6DKI2 356 aa13.97□□□□□ -0.17
PDLIM2-207ENST00000409417 LYPD6BQ8NI32 183 aa13.97□□□□□ -0.17
PDLIM2-207ENST00000409417 MRPL16Q9NX20 251 aaKnown RBP13.97□□□□□ -0.17
PDLIM2-207ENST00000409417 LY6G6CO95867 125 aa13.96□□□□□ -0.17
PDLIM2-207ENST00000409417 RPL35P42766 123 aaKnown RBP13.96□□□□□ -0.17
PDLIM2-207ENST00000409417 BAGE2Q86Y30 109 aa13.96□□□□□ -0.17
PDLIM2-207ENST00000409417 RASL10AQ92737 203 aa13.96□□□□□ -0.17
PDLIM2-207ENST00000409417 VAX2Q9UIW0 290 aa13.96□□□□□ -0.17
PDLIM2-207ENST00000409417 RYR2Q92736 4967 aa13.95□□□□□ -0.18
PDLIM2-207ENST00000409417 ZNF674Q2M3X9 581 aa13.95□□□□□ -0.18
PDLIM2-207ENST00000409417 IGKV3D-20A0A0C4DH25 116 aa13.94□□□□□ -0.18
PDLIM2-207ENST00000409417 M0R2P5 195 aa13.94□□□□□ -0.18
PDLIM2-207ENST00000409417 NHLRC2Q8NBF2 726 aa13.94□□□□□ -0.18
PDLIM2-207ENST00000409417 DERL1Q9BUN8 251 aa13.94□□□□□ -0.18
PDLIM2-207ENST00000409417 MLST8Q9BVC4 326 aa13.94□□□□□ -0.18
PDLIM2-207ENST00000409417 MUC4Q99102 2169 aa13.94□□□□□ -0.18
PDLIM2-207ENST00000409417 ALMS1Q8TCU4 4167 aa13.94□□□□□ -0.18
PDLIM2-207ENST00000409417 SH2D1AO60880 128 aa13.93□□□□□ -0.18
PDLIM2-207ENST00000409417 HOXA5P20719 270 aa13.93□□□□□ -0.18
PDLIM2-207ENST00000409417 OR5I1Q13606 314 aa13.93□□□□□ -0.18
PDLIM2-207ENST00000409417 C15orf53Q8NAA6 179 aa13.93□□□□□ -0.18
PDLIM2-207ENST00000409417 DNAH1Q9P2D7 4330 aa13.93□□□□□ -0.18
PDLIM2-207ENST00000409417 ORM1P02763 201 aa13.93□□□□□ -0.18
PDLIM2-207ENST00000409417 C9orf85Q96MD7 179 aa13.92□□□□□ -0.18
PDLIM2-207ENST00000409417 B4DEV8 164 aa13.91□□□□□ -0.18
PDLIM2-207ENST00000409417 TEX261Q6UWH6 196 aa13.91□□□□□ -0.18
PDLIM2-207ENST00000409417 MED9Q9NWA0 146 aa13.91□□□□□ -0.18
PDLIM2-207ENST00000409417 TRAV26-1A0A087WT03 109 aa13.9□□□□□ -0.18
PDLIM2-207ENST00000409417 RBFOX3A6NFN3 312 aa13.9□□□□□ -0.18
PDLIM2-207ENST00000409417 KRBOX1C9JBD0 128 aa13.9□□□□□ -0.18
PDLIM2-207ENST00000409417 P0DMU3 169 aa13.9□□□□□ -0.18
PDLIM2-207ENST00000409417 FAM231AP0DMU4 169 aa13.9□□□□□ -0.18
PDLIM2-207ENST00000409417 FAM231CP0DMU5 169 aa13.9□□□□□ -0.18
PDLIM2-207ENST00000409417 RNASE3P12724 160 aaKnown RBP13.9□□□□□ -0.18
PDLIM2-207ENST00000409417 LINC01559Q495D7 138 aa13.9□□□□□ -0.18
PDLIM2-207ENST00000409417 M0R036 132 aa13.89□□□□□ -0.19
PDLIM2-207ENST00000409417 S100A4P26447 101 aaKnown RBP13.89□□□□□ -0.19
PDLIM2-207ENST00000409417 ASIPP42127 132 aa13.89□□□□□ -0.19
PDLIM2-207ENST00000409417 CENPWQ5EE01 88 aa13.89□□□□□ -0.19
PDLIM2-207ENST00000409417 H3BNG1 76 aa13.88□□□□□ -0.19
PDLIM2-207ENST00000409417 IGHV3-53P01767 116 aa13.88□□□□□ -0.19
PDLIM2-207ENST00000409417 GNG4P50150 75 aa13.88□□□□□ -0.19
PDLIM2-207ENST00000409417 ZNF876PQ49A33 203 aa13.88□□□□□ -0.19
PDLIM2-207ENST00000409417 ZNF506Q5JVG8 444 aa13.88□□□□□ -0.19
PDLIM2-207ENST00000409417 DNLZQ5SXM8 178 aa13.88□□□□□ -0.19
PDLIM2-207ENST00000409417 PTH2Q96A98 100 aa13.88□□□□□ -0.19
PDLIM2-207ENST00000409417 RAB19A4D1S5 217 aa13.87□□□□□ -0.19
PDLIM2-207ENST00000409417 ZNF575Q86XF7 245 aa13.87□□□□□ -0.19
PDLIM2-207ENST00000409417 POM121L12Q8N7R1 296 aa13.87□□□□□ -0.19
PDLIM2-207ENST00000409417 SMIM12Q96EX1 92 aa13.87□□□□□ -0.19
PDLIM2-207ENST00000409417 IL36BQ9NZH7 164 aa13.87□□□□□ -0.19
PDLIM2-207ENST00000409417 HYDINQ4G0P3 5121 aa13.87□□□□□ -0.19
PDLIM2-207ENST00000409417 TRAV4A0A0B4J268 109 aa13.87□□□□□ -0.19
PDLIM2-207ENST00000409417 A0A0J9YY99 117 aa13.87□□□□□ -0.19
PDLIM2-207ENST00000409417 C9JCJ5 164 aa13.87□□□□□ -0.19
PDLIM2-207ENST00000409417 NUDT3O95989 172 aa13.87□□□□□ -0.19
PDLIM2-207ENST00000409417 SLAQ13239 276 aa13.87□□□□□ -0.19
PDLIM2-207ENST00000409417 TRBV20OR9-2A0A075B6H5 130 aa13.86□□□□□ -0.19
PDLIM2-207ENST00000409417 TMEM250H0YL14 139 aa13.86□□□□□ -0.19
PDLIM2-207ENST00000409417 IGLV2-8P01709 118 aa13.86□□□□□ -0.19
PDLIM2-207ENST00000409417 FHL2Q14192 279 aa13.86□□□□□ -0.19
PDLIM2-207ENST00000409417 PRR27Q6MZM9 219 aa13.86□□□□□ -0.19
PDLIM2-207ENST00000409417 OR4C5Q8NGB2 326 aa13.86□□□□□ -0.19
PDLIM2-207ENST00000409417 ZNF479Q96JC4 524 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms