RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 OBSL1O75147 1896 aa13.91□□□□□ -0.18
SMPD4-202ENST00000409031 A4D1N5 150 aa13.91□□□□□ -0.18
SMPD4-202ENST00000409031 ACACAQ13085 2346 aa13.91□□□□□ -0.18
SMPD4-202ENST00000409031 UBL5Q9BZL1 73 aa13.91□□□□□ -0.18
SMPD4-202ENST00000409031 DYNAPQ8N1N2 210 aa13.91□□□□□ -0.18
SMPD4-202ENST00000409031 AGPAT4-IT1Q9H0P7 198 aa13.91□□□□□ -0.18
SMPD4-202ENST00000409031 VWC2LB2RUY7 222 aa13.9□□□□□ -0.18
SMPD4-202ENST00000409031 MALP21145 153 aa13.9□□□□□ -0.18
SMPD4-202ENST00000409031 J3KT08 172 aa13.9□□□□□ -0.18
SMPD4-202ENST00000409031 SRSF2Q01130 221 aaKnown RBP13.9□□□□□ -0.18
SMPD4-202ENST00000409031 TM2D2Q9BX73 214 aa13.9□□□□□ -0.18
SMPD4-202ENST00000409031 RHODO00212 210 aa13.9□□□□□ -0.18
SMPD4-202ENST00000409031 CFHR4Q92496 578 aa13.9□□□□□ -0.18
SMPD4-202ENST00000409031 DAZ1Q9NQZ3 744 aaKnown RBP13.9□□□□□ -0.18
SMPD4-202ENST00000409031 IGKV1-17P01599 117 aa13.9□□□□□ -0.19
SMPD4-202ENST00000409031 CD59P13987 128 aa13.9□□□□□ -0.19
SMPD4-202ENST00000409031 GPR179Q6PRD1 2367 aa13.89□□□□□ -0.19
SMPD4-202ENST00000409031 PLA2G5P39877 138 aa13.89□□□□□ -0.19
SMPD4-202ENST00000409031 STHQ8IWL8 128 aa13.89□□□□□ -0.19
SMPD4-202ENST00000409031 KLHL30-AS1Q8NEE0 82 aa13.89□□□□□ -0.19
SMPD4-202ENST00000409031 TP73-AS1Q9UF72 201 aa13.89□□□□□ -0.19
SMPD4-202ENST00000409031 RHOHQ15669 191 aa13.89□□□□□ -0.19
SMPD4-202ENST00000409031 PHLDA1Q8WV24 401 aaPredicted RBP13.89□□□□□ -0.19
SMPD4-202ENST00000409031 MRPL53Q96EL3 112 aaKnown RBP13.89□□□□□ -0.19
SMPD4-202ENST00000409031 TRGV4A0A0C4DH28 118 aa13.89□□□□□ -0.19
SMPD4-202ENST00000409031 C6orf226Q5I0X4 101 aa13.89□□□□□ -0.19
SMPD4-202ENST00000409031 NBASA2RRP1 2371 aa13.88□□□□□ -0.19
SMPD4-202ENST00000409031 MED13LQ71F56 2210 aa13.88□□□□□ -0.19
SMPD4-202ENST00000409031 CACNA1BQ00975 2339 aa13.88□□□□□ -0.19
SMPD4-202ENST00000409031 TMEM219Q86XT9 240 aa13.88□□□□□ -0.19
SMPD4-202ENST00000409031 PIFOQ8TCI5 191 aa13.88□□□□□ -0.19
SMPD4-202ENST00000409031 PTH2Q96A98 100 aa13.88□□□□□ -0.19
SMPD4-202ENST00000409031 RNF114Q9Y508 228 aa13.88□□□□□ -0.19
SMPD4-202ENST00000409031 PCNX1Q96RV3 2341 aa13.88□□□□□ -0.19
SMPD4-202ENST00000409031 FRMPD3Q5JV73 1810 aa13.88□□□□□ -0.19
SMPD4-202ENST00000409031 ZGRF1Q86YA3 2104 aa13.88□□□□□ -0.19
SMPD4-202ENST00000409031 FAM236AA0A1B0GUQ0 79 aa13.87□□□□□ -0.19
SMPD4-202ENST00000409031 FAM236BA0A1B0GV22 79 aa13.87□□□□□ -0.19
SMPD4-202ENST00000409031 COL4A6Q14031 1691 aa13.87□□□□□ -0.19
SMPD4-202ENST00000409031 SYNJ2BPP57105 145 aa13.87□□□□□ -0.19
SMPD4-202ENST00000409031 TRAV13-2A0A0B4J235 113 aa13.87□□□□□ -0.19
SMPD4-202ENST00000409031 ATOX1O00244 68 aa13.87□□□□□ -0.19
SMPD4-202ENST00000409031 MT-ATP8P03928 68 aa13.87□□□□□ -0.19
SMPD4-202ENST00000409031 ABCA4P78363 2273 aa13.86□□□□□ -0.19
SMPD4-202ENST00000409031 H3BT86 120 aa13.86□□□□□ -0.19
SMPD4-202ENST00000409031 MLST8Q9BVC4 326 aa13.86□□□□□ -0.19
SMPD4-202ENST00000409031 TRBV10-2A0A0K0K1G8 114 aa13.86□□□□□ -0.19
SMPD4-202ENST00000409031 HERV-K104P63124 156 aa13.86□□□□□ -0.19
SMPD4-202ENST00000409031 MED13Q9UHV7 2174 aa13.86□□□□□ -0.19
SMPD4-202ENST00000409031 ATP6V0E1O15342 81 aa13.86□□□□□ -0.19
SMPD4-202ENST00000409031 COL8A2P25067 703 aa13.86□□□□□ -0.19
SMPD4-202ENST00000409031 LOXL1Q08397 574 aaPredicted RBP13.86□□□□□ -0.19
SMPD4-202ENST00000409031 TICRRQ7Z2Z1 1910 aa13.85□□□□□ -0.19
SMPD4-202ENST00000409031 RIF1Q5UIP0 2472 aaKnown RBP13.85□□□□□ -0.19
SMPD4-202ENST00000409031 BAALC-AS2P0C853 105 aa13.85□□□□□ -0.19
SMPD4-202ENST00000409031 I3L2K1 104 aa13.85□□□□□ -0.19
SMPD4-202ENST00000409031 KAAG1Q9UBP8 84 aa13.85□□□□□ -0.19
SMPD4-202ENST00000409031 FREM1Q5H8C1 2179 aa13.85□□□□□ -0.19
SMPD4-202ENST00000409031 MUSTN1Q8IVN3 82 aa13.85□□□□□ -0.19
SMPD4-202ENST00000409031 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.84□□□□□ -0.191e-6■■■■□ 22.5
SMPD4-202ENST00000409031 NDUFV3P56181 108 aaKnown RBP13.84□□□□□ -0.19
SMPD4-202ENST00000409031 ZNF106Q9H2Y7 1883 aaKnown RBP13.84□□□□□ -0.19
SMPD4-202ENST00000409031 OVOL3O00110 214 aa13.84□□□□□ -0.19
SMPD4-202ENST00000409031 IGHV1OR15-1A0A075B7D0 117 aa13.84□□□□□ -0.19
SMPD4-202ENST00000409031 BRWD1-AS2P59051 145 aa13.84□□□□□ -0.19
SMPD4-202ENST00000409031 LHBP01229 141 aa13.83□□□□□ -0.2
SMPD4-202ENST00000409031 LY6G6EA0A0G2JKS1 128 aa13.83□□□□□ -0.2
SMPD4-202ENST00000409031 LINC00322Q6ZN03 302 aaPredicted RBP13.83□□□□□ -0.2
SMPD4-202ENST00000409031 U3KQA8 63 aa13.83□□□□□ -0.2
SMPD4-202ENST00000409031 FOXE3Q13461 319 aa13.83□□□□□ -0.2
SMPD4-202ENST00000409031 ICOSQ9Y6W8 199 aa13.83□□□□□ -0.2
SMPD4-202ENST00000409031 LINC00310P59036 64 aa13.82□□□□□ -0.2
SMPD4-202ENST00000409031 TRGV1A0A0A0MS02 117 aa13.82□□□□□ -0.2
SMPD4-202ENST00000409031 A0A0B4J2C4 111 aa13.82□□□□□ -0.2
SMPD4-202ENST00000409031 K7EIM0 57 aa13.82□□□□□ -0.2
SMPD4-202ENST00000409031 TNCP24821 2201 aa13.82□□□□□ -0.2
SMPD4-202ENST00000409031 RBMY1FQ15415 496 aaKnown RBP13.82□□□□□ -0.2
SMPD4-202ENST00000409031 A0A0G2JNJ9 132 aa13.82□□□□□ -0.2
SMPD4-202ENST00000409031 Q9UFV3 132 aa13.82□□□□□ -0.2
SMPD4-202ENST00000409031 E7EQL1 145 aa13.81□□□□□ -0.2
SMPD4-202ENST00000409031 NDUFA11Q86Y39 141 aa13.81□□□□□ -0.2
SMPD4-202ENST00000409031 TOMM6Q96B49 74 aa13.81□□□□□ -0.2
SMPD4-202ENST00000409031 C2orf91Q6ZV80 131 aa13.81□□□□□ -0.2
SMPD4-202ENST00000409031 NDUFA4O00483 81 aa13.81□□□□□ -0.2
SMPD4-202ENST00000409031 RPL39LQ96EH5 51 aaKnown RBP13.8□□□□□ -0.2
SMPD4-202ENST00000409031 HERVK_113P63121 156 aa13.8□□□□□ -0.2
SMPD4-202ENST00000409031 BAALCQ8WXS3 180 aa13.8□□□□□ -0.2
SMPD4-202ENST00000409031 CCL19Q99731 98 aa13.8□□□□□ -0.2
SMPD4-202ENST00000409031 MRPL36Q9P0J6 103 aaKnown RBP13.8□□□□□ -0.2
SMPD4-202ENST00000409031 SPATA25Q9BR10 227 aa13.8□□□□□ -0.2
SMPD4-202ENST00000409031 Q8N976 141 aa13.8□□□□□ -0.2
SMPD4-202ENST00000409031 CRYGCP07315 174 aa13.79□□□□□ -0.2
SMPD4-202ENST00000409031 SAA4P35542 130 aa13.79□□□□□ -0.2
SMPD4-202ENST00000409031 G3V318 75 aa13.79□□□□□ -0.2
SMPD4-202ENST00000409031 PROP1O75360 226 aa13.79□□□□□ -0.2
SMPD4-202ENST00000409031 ATP5G1P05496 136 aa13.79□□□□□ -0.2
SMPD4-202ENST00000409031 ZFP2Q6ZN57 461 aa13.79□□□□□ -0.2
SMPD4-202ENST00000409031 TCL1BO95988 128 aa13.79□□□□□ -0.2
SMPD4-202ENST00000409031 KNCNA6PVL3 124 aa13.79□□□□□ -0.2
SMPD4-202ENST00000409031 SPINK13Q1W4C9 94 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms