RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 GYPAP02724 150 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 CD7P09564 240 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 COX6A1P12074 109 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 FAUP35544 74 aaKnown RBP2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 CA7P43166 264 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 LSM3P62310 102 aaKnown RBP2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 UBE2BP63146 152 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 INSL4Q14641 139 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 KRTAP25-1Q3LHN0 102 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 NMSQ5H8A3 153 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 C7orf65Q6ZTY9 151 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 SPATA12Q7Z6I5 190 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 SBSPONQ8IVN8 264 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 Q8NAQ8 132 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 C18orf32Q8TCD1 76 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 PPDPFLQ8WWR9 84 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 RAB37Q96AX2 223 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 UPK3BQ9BT76 320 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 MYH8P13535 1937 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 PPLO60437 1756 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 WIZO95785 1651 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 RALGAPA2Q2PPJ7 1873 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 MYO18AQ92614 2054 aaKnown RBP2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 ZNF638Q14966 1978 aaKnown RBP2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 LYRM1O43325 122 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 SLC25A20O43772 301 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 IGHV3-30-3P0DP02 117 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 COL8A2P25067 703 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 KISS1Q15726 138 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 OR8B3Q8NGG8 313 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 FGF13Q92913 245 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 MS4A6EQ96DS6 147 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 LRRC9Q6ZRR7 1453 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 RALGAPBQ86X10 1494 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 MROH2AA6NES4 1674 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 ABCC1P33527 1531 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 DLC1Q96QB1 1528 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 ITSN1Q15811 1721 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 VWDEQ8N2E2 1590 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 CFAP74Q9C0B2 1584 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 FANCMQ8IYD8 2048 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 MYO3AQ8NEV4 1616 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 CRB1P82279 1406 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 C10orf71Q711Q0 1435 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 ZNF142P52746 1687 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 NAP1L6A6NFF2 107 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 FAM24AA6NFZ4 105 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 A6NN06 94 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 IGKCP01834 107 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 SRP19P09132 144 aaKnown RBP2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 HRES1P13985 223 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 SSR2P43308 183 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 CSN1S1P47710 185 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 MRPL51Q4U2R6 128 aaKnown RBP2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 SCXQ7RTU7 201 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 LYPD6Q86Y78 171 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 DIRC1Q969H9 104 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 COL5A3P25940 1745 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 COL18A1P39060 1754 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 KDM3BQ7LBC6 1761 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 IQGAP2Q13576 1575 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 PXDNQ92626 1479 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 XRN1Q8IZH2 1706 aaKnown RBP2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 CCDC88CQ9P219 2028 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 UMAD1C9J7I0 102 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 C9JCJ5 164 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 SDCBPO00560 298 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 TIMM17BO60830 172 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 CPSF4O95639 269 aaKnown RBP2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 MPV17LQ2QL34 196 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 TMEM155Q4W5P6 130 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 LINC01545Q5VT33 79 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 SOSTDC1Q6X4U4 206 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 Q8N8P6 123 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 TSKUQ8WUA8 353 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 ODF3Q96PU9 254 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 OR8B2Q96RD0 313 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 IL36BQ9NZH7 164 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 LINC00474Q9P2X8 69 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 ATG2BQ96BY7 2078 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 PLXNA4Q9HCM2 1894 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 KIAA0556O60303 1618 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 HELZP42694 1942 aaKnown RBP2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 TCHHQ07283 1943 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 IFT172Q9UG01 1749 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 SCN11AQ9UI33 1791 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 DOCK2Q92608 1830 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 ARHGEF12Q9NZN5 1544 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 IGLV3-9A0A075B6K5 115 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 MDFIC2A0A1B0GVS7 189 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 CCL20P78556 96 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 CDK5R1Q15078 307 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 PATE2Q6UY27 113 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 DAND5Q8N907 189 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 C15orf53Q8NAA6 179 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 MUC7Q8TAX7 377 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 CMTM2Q8TAZ6 248 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 MYOZ3Q8TDC0 251 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 MCEEQ96PE7 176 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms