RNA–Protein interactions for RNA: ENST00000405885.6

IRF1-202, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene IRF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-202ENST00000405885 FOXA3P55318 350 aaPredicted RBP12.44□□□□□ -0.42
IRF1-202ENST00000405885 RAB4BP61018 213 aa12.44□□□□□ -0.42
IRF1-202ENST00000405885 CTAG1AP78358 180 aa12.44□□□□□ -0.42
IRF1-202ENST00000405885 ANXA2RQ3ZCQ2 193 aa12.44□□□□□ -0.42
IRF1-202ENST00000405885 SSBP4Q9BWG4 385 aaPredicted RBP12.44□□□□□ -0.42
IRF1-202ENST00000405885 C19orf73Q9NVV2 129 aa12.44□□□□□ -0.42
IRF1-202ENST00000405885 FAM231BA6NCW3 169 aa12.44□□□□□ -0.42
IRF1-202ENST00000405885 ZNF324O75467 553 aaPredicted RBP12.44□□□□□ -0.42
IRF1-202ENST00000405885 RBMY1A1P0DJD3 496 aaKnown RBP12.44□□□□□ -0.42
IRF1-202ENST00000405885 RBMY1CP0DJD4 496 aa12.44□□□□□ -0.42
IRF1-202ENST00000405885 RBMY1FQ15415 496 aaKnown RBP12.44□□□□□ -0.42
IRF1-202ENST00000405885 ODF3Q96PU9 254 aa12.44□□□□□ -0.42
IRF1-202ENST00000405885 TRAPPC1Q9Y5R8 145 aa12.44□□□□□ -0.42
IRF1-202ENST00000405885 CRXO43186 299 aaPredicted RBP12.43□□□□□ -0.42
IRF1-202ENST00000405885 LEPP41159 167 aa12.43□□□□□ -0.42
IRF1-202ENST00000405885 TMEM136Q6ZRR5 245 aa12.43□□□□□ -0.42
IRF1-202ENST00000405885 A0A1B0GXF2 115 aa12.42□□□□□ -0.42
IRF1-202ENST00000405885 C7orf71A4D174 169 aa12.42□□□□□ -0.42
IRF1-202ENST00000405885 GNRH2O43555 120 aa12.42□□□□□ -0.42
IRF1-202ENST00000405885 IGLC6P0CF74 106 aa12.42□□□□□ -0.42
IRF1-202ENST00000405885 C12orf54Q6X4T0 127 aa12.42□□□□□ -0.42
IRF1-202ENST00000405885 FER1L6-AS1Q8NA97 138 aa12.42□□□□□ -0.42
IRF1-202ENST00000405885 TIMM8BQ9Y5J9 83 aaPredicted RBP12.42□□□□□ -0.42
IRF1-202ENST00000405885 XKRY2A2RUG3 117 aa12.42□□□□□ -0.42
IRF1-202ENST00000405885 PRM2P04554 102 aa12.42□□□□□ -0.42
IRF1-202ENST00000405885 OR2K2Q8NGT1 345 aa12.42□□□□□ -0.42
IRF1-202ENST00000405885 TP53TG3Q9ULZ0 132 aa12.42□□□□□ -0.42
IRF1-202ENST00000405885 A8MTW9 85 aa12.41□□□□□ -0.42
IRF1-202ENST00000405885 HIST1H2BKO60814 126 aa12.41□□□□□ -0.42
IRF1-202ENST00000405885 HIST1H2BJP06899 126 aa12.41□□□□□ -0.42
IRF1-202ENST00000405885 TRGC1P0CF51 173 aa12.41□□□□□ -0.42
IRF1-202ENST00000405885 HIST1H2BOP23527 126 aa12.41□□□□□ -0.42
IRF1-202ENST00000405885 HIST1H2BBP33778 126 aa12.41□□□□□ -0.42
IRF1-202ENST00000405885 HIST1H2BDP58876 126 aa12.41□□□□□ -0.42
IRF1-202ENST00000405885 HIST1H2BCP62807 126 aa12.41□□□□□ -0.42
IRF1-202ENST00000405885 HIST2H2BEQ16778 126 aa12.41□□□□□ -0.42
IRF1-202ENST00000405885 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.41□□□□□ -0.42
IRF1-202ENST00000405885 C9orf66Q5T8R8 295 aa12.41□□□□□ -0.42
IRF1-202ENST00000405885 STHQ8IWL8 128 aa12.41□□□□□ -0.42
IRF1-202ENST00000405885 HIST1H2BHQ93079 126 aa12.41□□□□□ -0.42
IRF1-202ENST00000405885 HIST1H2BNQ99877 126 aa12.41□□□□□ -0.42
IRF1-202ENST00000405885 HIST1H2BMQ99879 126 aa12.41□□□□□ -0.42
IRF1-202ENST00000405885 MSRB1Q9NZV6 116 aa12.41□□□□□ -0.42
IRF1-202ENST00000405885 A0A1B0GUT8 65 aa12.41□□□□□ -0.42
IRF1-202ENST00000405885 RAB5BP61020 215 aa12.41□□□□□ -0.42
IRF1-202ENST00000405885 SLAQ13239 276 aa12.41□□□□□ -0.42
IRF1-202ENST00000405885 KIAA1644Q3SXP7 199 aa12.41□□□□□ -0.42
IRF1-202ENST00000405885 WFDC9Q8NEX5 89 aa12.41□□□□□ -0.42
IRF1-202ENST00000405885 TMEM158Q8WZ71 300 aa12.41□□□□□ -0.42
IRF1-202ENST00000405885 MRPL18Q9H0U6 180 aaKnown RBP12.41□□□□□ -0.42
IRF1-202ENST00000405885 H3BVH4 76 aa12.4□□□□□ -0.42
IRF1-202ENST00000405885 RPS20P60866 119 aaKnown RBP12.4□□□□□ -0.42
IRF1-202ENST00000405885 HBBP68871 147 aa12.4□□□□□ -0.42
IRF1-202ENST00000405885 GNB1LQ9BYB4 327 aa12.4□□□□□ -0.42
IRF1-202ENST00000405885 TSPOP30536 169 aa12.39□□□□□ -0.43
IRF1-202ENST00000405885 DEFB125Q8N687 156 aa12.39□□□□□ -0.43
IRF1-202ENST00000405885 HTN1P15515 57 aa12.39□□□□□ -0.43
IRF1-202ENST00000405885 CTRLP40313 264 aa12.39□□□□□ -0.43
IRF1-202ENST00000405885 INSL3P51460 131 aa12.39□□□□□ -0.43
IRF1-202ENST00000405885 S100A12P80511 92 aa12.39□□□□□ -0.43
IRF1-202ENST00000405885 SHISA2Q6UWI4 295 aa12.39□□□□□ -0.43
IRF1-202ENST00000405885 ATP5L2Q7Z4Y8 100 aa12.39□□□□□ -0.43
IRF1-202ENST00000405885 TRPT1Q86TN4 253 aaKnown RBP12.39□□□□□ -0.43
IRF1-202ENST00000405885 OR10AG1Q8NH19 301 aa12.39□□□□□ -0.43
IRF1-202ENST00000405885 C12orf57Q99622 126 aa12.39□□□□□ -0.43
IRF1-202ENST00000405885 XCL2Q9UBD3 114 aa12.39□□□□□ -0.43
IRF1-202ENST00000405885 NBEAL2Q6ZNJ1 2754 aa12.39□□□□□ -0.43
IRF1-202ENST00000405885 RPL35AP18077 110 aaKnown RBP12.38□□□□□ -0.43
IRF1-202ENST00000405885 NTF3P20783 257 aa12.38□□□□□ -0.43
IRF1-202ENST00000405885 AKR1D1P51857 326 aa12.38□□□□□ -0.43
IRF1-202ENST00000405885 FAM159AQ6UWV7 190 aa12.38□□□□□ -0.43
IRF1-202ENST00000405885 TWIST1Q15672 202 aa12.37□□□□□ -0.43
IRF1-202ENST00000405885 OXLD1Q5BKU9 147 aa12.37□□□□□ -0.43
IRF1-202ENST00000405885 RNASE3P12724 160 aaKnown RBP12.36□□□□□ -0.43
IRF1-202ENST00000405885 WDR73Q6P4I2 378 aa12.36□□□□□ -0.43
IRF1-202ENST00000405885 PCP4L1A6NKN8 68 aa12.36□□□□□ -0.43
IRF1-202ENST00000405885 RASL11AQ6T310 242 aa12.36□□□□□ -0.43
IRF1-202ENST00000405885 Q8N1Y9 231 aa12.36□□□□□ -0.43
IRF1-202ENST00000405885 MDFICQ9P1T7 246 aa12.36□□□□□ -0.43
IRF1-202ENST00000405885 C5orf52A6NGY3 159 aa12.35□□□□□ -0.43
IRF1-202ENST00000405885 HLA-DQA1P01909 254 aa12.35□□□□□ -0.43
IRF1-202ENST00000405885 S100A4P26447 101 aaKnown RBP12.35□□□□□ -0.43
IRF1-202ENST00000405885 ASIPP42127 132 aa12.35□□□□□ -0.43
IRF1-202ENST00000405885 BORCS7Q96B45 105 aa12.35□□□□□ -0.43
IRF1-202ENST00000405885 FAM110AQ9BQ89 295 aa12.35□□□□□ -0.43
IRF1-202ENST00000405885 APCSP02743 223 aa12.34□□□□□ -0.43
IRF1-202ENST00000405885 GIG44P09565 113 aaPredicted RBP12.34□□□□□ -0.43
IRF1-202ENST00000405885 SNRPEP62304 92 aaKnown RBP12.34□□□□□ -0.43
IRF1-202ENST00000405885 RIGQ13278 110 aa12.34□□□□□ -0.43
IRF1-202ENST00000405885 GTSCR1Q86UQ5 136 aa12.34□□□□□ -0.43
IRF1-202ENST00000405885 CNFNQ9BYD5 112 aa12.34□□□□□ -0.43
IRF1-202ENST00000405885 NOTCH1P46531 2555 aa12.34□□□□□ -0.43
IRF1-202ENST00000405885 IGHV1OR15-1A0A075B7D0 117 aa12.34□□□□□ -0.43
IRF1-202ENST00000405885 UBE2CO00762 179 aa12.34□□□□□ -0.43
IRF1-202ENST00000405885 NDUFA6P56556 154 aa12.34□□□□□ -0.43
IRF1-202ENST00000405885 TDRG1Q3Y452 100 aa12.34□□□□□ -0.43
IRF1-202ENST00000405885 MDFIQ99750 246 aa12.34□□□□□ -0.43
IRF1-202ENST00000405885 MUC4Q99102 2169 aa12.34□□□□□ -0.43
IRF1-202ENST00000405885 M0R381 172 aa12.33□□□□□ -0.44
IRF1-202ENST00000405885 SNAI2O43623 268 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms