RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 GAGE12GP0CL81 117 aa10.32□□□□□ -0.76
CDPF1-203ENST00000404583 GAGE12IP0CL82 117 aa10.32□□□□□ -0.76
CDPF1-203ENST00000404583 AKR1C3P42330 323 aa10.32□□□□□ -0.76
CDPF1-203ENST00000404583 TCL1AP56279 114 aa10.32□□□□□ -0.76
CDPF1-203ENST00000404583 UBE2G1P62253 170 aa10.32□□□□□ -0.76
CDPF1-203ENST00000404583 TMEM183BQ1AE95 376 aa10.32□□□□□ -0.76
CDPF1-203ENST00000404583 TMEM183AQ8IXX5 376 aa10.32□□□□□ -0.76
CDPF1-203ENST00000404583 FMC1Q96HJ9 113 aa10.32□□□□□ -0.76
CDPF1-203ENST00000404583 MDFICQ9P1T7 246 aa10.32□□□□□ -0.76
CDPF1-203ENST00000404583 TDRG1Q3Y452 100 aa10.31□□□□□ -0.76
CDPF1-203ENST00000404583 CLLU1Q5K131 121 aa10.31□□□□□ -0.76
CDPF1-203ENST00000404583 LCE2DQ5TA82 110 aaPredicted RBP10.31□□□□□ -0.76
CDPF1-203ENST00000404583 Q6ZTI0 123 aa10.31□□□□□ -0.76
CDPF1-203ENST00000404583 LINC00612Q8N6U2 182 aa10.31□□□□□ -0.76
CDPF1-203ENST00000404583 PCNPQ8WW12 178 aaKnown RBP10.31□□□□□ -0.76
CDPF1-203ENST00000404583 C11orf21Q9P2W6 132 aa10.31□□□□□ -0.76
CDPF1-203ENST00000404583 APLNQ9ULZ1 77 aa10.31□□□□□ -0.76
CDPF1-203ENST00000404583 PFN1P07737 140 aaKnown RBP10.3□□□□□ -0.76
CDPF1-203ENST00000404583 ZNF415Q09FC8 603 aa10.3□□□□□ -0.76
CDPF1-203ENST00000404583 ZFP30Q9Y2G7 519 aa10.3□□□□□ -0.76
CDPF1-203ENST00000404583 TRGV11A0A075B6L2 103 aa10.29□□□□□ -0.76
CDPF1-203ENST00000404583 TRGV1A0A0A0MS02 117 aa10.29□□□□□ -0.76
CDPF1-203ENST00000404583 TRBV6-1A0A0K0K1D8 114 aa10.29□□□□□ -0.76
CDPF1-203ENST00000404583 SPINK4O60575 86 aa10.29□□□□□ -0.76
CDPF1-203ENST00000404583 TYMSP04818 313 aa10.29□□□□□ -0.76
CDPF1-203ENST00000404583 ATP5G1P05496 136 aa10.29□□□□□ -0.76
CDPF1-203ENST00000404583 LYPD6BQ8NI32 183 aa10.29□□□□□ -0.76
CDPF1-203ENST00000404583 ZC2HC1AQ96GY0 325 aa10.29□□□□□ -0.76
CDPF1-203ENST00000404583 KCNS1Q96KK3 526 aa10.29□□□□□ -0.76
CDPF1-203ENST00000404583 SDF2L1Q9HCN8 221 aa10.29□□□□□ -0.76
CDPF1-203ENST00000404583 FABP5P3A8MUU1 101 aa10.28□□□□□ -0.76
CDPF1-203ENST00000404583 F5H768 121 aa10.28□□□□□ -0.76
CDPF1-203ENST00000404583 LTAP01374 205 aa10.28□□□□□ -0.76
CDPF1-203ENST00000404583 IFNA1P01562 189 aa10.28□□□□□ -0.76
CDPF1-203ENST00000404583 CRIP1P50238 77 aa10.28□□□□□ -0.76
CDPF1-203ENST00000404583 TCTAP57738 103 aa10.28□□□□□ -0.76
CDPF1-203ENST00000404583 TXNDC17Q9BRA2 123 aa10.28□□□□□ -0.76
CDPF1-203ENST00000404583 MRPL16Q9NX20 251 aaKnown RBP10.28□□□□□ -0.76
CDPF1-203ENST00000404583 IGHV3-16A0A0C4DH30 117 aa10.27□□□□□ -0.77
CDPF1-203ENST00000404583 LY6G6CO95867 125 aa10.27□□□□□ -0.77
CDPF1-203ENST00000404583 S100A9P06702 114 aaKnown RBP10.27□□□□□ -0.77
CDPF1-203ENST00000404583 MEF2BQ02080 365 aaPredicted RBP10.27□□□□□ -0.77
CDPF1-203ENST00000404583 TMEM88Q6PEY1 159 aa10.27□□□□□ -0.77
CDPF1-203ENST00000404583 COX8CQ7Z4L0 72 aa10.27□□□□□ -0.77
CDPF1-203ENST00000404583 NHLRC2Q8NBF2 726 aa10.27□□□□□ -0.77
CDPF1-203ENST00000404583 LINC00476Q8WZB0 136 aa10.27□□□□□ -0.77
CDPF1-203ENST00000404583 NDUFAF3Q9BU61 184 aa10.27□□□□□ -0.77
CDPF1-203ENST00000404583 MUC4Q99102 2169 aa10.26□□□□□ -0.77
CDPF1-203ENST00000404583 TRGV2A0A075B6R0 118 aa10.26□□□□□ -0.77
CDPF1-203ENST00000404583 BCL2P10415 239 aa10.26□□□□□ -0.77
CDPF1-203ENST00000404583 LGALS9BQ3B8N2 356 aa10.26□□□□□ -0.77
CDPF1-203ENST00000404583 C11orf52Q96A22 123 aa10.26□□□□□ -0.77
CDPF1-203ENST00000404583 FAM210BQ96KR6 192 aa10.26□□□□□ -0.77
CDPF1-203ENST00000404583 SPXQ9BT56 116 aa10.26□□□□□ -0.77
CDPF1-203ENST00000404583 DERL1Q9BUN8 251 aa10.26□□□□□ -0.77
CDPF1-203ENST00000404583 VAX2Q9UIW0 290 aa10.26□□□□□ -0.77
CDPF1-203ENST00000404583 IGKV3D-20A0A0C4DH25 116 aa10.25□□□□□ -0.77
CDPF1-203ENST00000404583 SH2D1AO60880 128 aa10.25□□□□□ -0.77
CDPF1-203ENST00000404583 RPL35P42766 123 aaKnown RBP10.25□□□□□ -0.77
CDPF1-203ENST00000404583 BAGE2Q86Y30 109 aa10.25□□□□□ -0.77
CDPF1-203ENST00000404583 PDE6DO43924 150 aa10.24□□□□□ -0.77
CDPF1-203ENST00000404583 ORM1P02763 201 aa10.24□□□□□ -0.77
CDPF1-203ENST00000404583 HOXA5P20719 270 aa10.24□□□□□ -0.77
CDPF1-203ENST00000404583 OR5I1Q13606 314 aa10.24□□□□□ -0.77
CDPF1-203ENST00000404583 ZNF674Q2M3X9 581 aa10.24□□□□□ -0.77
CDPF1-203ENST00000404583 FAM162BQ5T6X4 162 aa10.24□□□□□ -0.77
CDPF1-203ENST00000404583 C18orf15Q96N68 181 aa10.24□□□□□ -0.77
CDPF1-203ENST00000404583 MLST8Q9BVC4 326 aa10.24□□□□□ -0.77
CDPF1-203ENST00000404583 NACAE9PAV3 2078 aa10.24□□□□□ -0.77
CDPF1-203ENST00000404583 LGALS9CQ6DKI2 356 aa10.24□□□□□ -0.77
CDPF1-203ENST00000404583 MED9Q9NWA0 146 aa10.24□□□□□ -0.77
CDPF1-203ENST00000404583 RAB19A4D1S5 217 aa10.23□□□□□ -0.77
CDPF1-203ENST00000404583 RBFOX3A6NFN3 312 aa10.23□□□□□ -0.77
CDPF1-203ENST00000404583 B4DEV8 164 aa10.23□□□□□ -0.77
CDPF1-203ENST00000404583 M0R036 132 aa10.23□□□□□ -0.77
CDPF1-203ENST00000404583 M0R2P5 195 aa10.23□□□□□ -0.77
CDPF1-203ENST00000404583 IGHV3-53P01767 116 aa10.23□□□□□ -0.77
CDPF1-203ENST00000404583 RNASE3P12724 160 aaKnown RBP10.23□□□□□ -0.77
CDPF1-203ENST00000404583 TAGLN2P37802 199 aaKnown RBP10.23□□□□□ -0.77
CDPF1-203ENST00000404583 RASL10AQ92737 203 aa10.23□□□□□ -0.77
CDPF1-203ENST00000404583 VPS13DQ5THJ4 4388 aa10.23□□□□□ -0.77
CDPF1-203ENST00000404583 KMT2AQ03164 3969 aa10.23□□□□□ -0.77
CDPF1-203ENST00000404583 KRBOX1C9JBD0 128 aa10.22□□□□□ -0.77
CDPF1-203ENST00000404583 C9orf85Q96MD7 179 aa10.22□□□□□ -0.77
CDPF1-203ENST00000404583 TRAV26-1A0A087WT03 109 aa10.21□□□□□ -0.78
CDPF1-203ENST00000404583 TMSB15BA0A087X1C1 80 aa10.21□□□□□ -0.78
CDPF1-203ENST00000404583 A0A0J9YY99 117 aa10.21□□□□□ -0.78
CDPF1-203ENST00000404583 LINC00862A6NCI5 91 aa10.21□□□□□ -0.78
CDPF1-203ENST00000404583 NUDT3O95989 172 aa10.21□□□□□ -0.78
CDPF1-203ENST00000404583 S100A4P26447 101 aaKnown RBP10.21□□□□□ -0.78
CDPF1-203ENST00000404583 CENPWQ5EE01 88 aa10.21□□□□□ -0.78
CDPF1-203ENST00000404583 TOR2AQ5JU69 321 aa10.21□□□□□ -0.78
CDPF1-203ENST00000404583 ZNF575Q86XF7 245 aa10.21□□□□□ -0.78
CDPF1-203ENST00000404583 C15orf53Q8NAA6 179 aa10.21□□□□□ -0.78
CDPF1-203ENST00000404583 GRIFINA4D1Z8 144 aa10.2□□□□□ -0.78
CDPF1-203ENST00000404583 C9JCJ5 164 aa10.2□□□□□ -0.78
CDPF1-203ENST00000404583 IGLV2-8P01709 118 aa10.2□□□□□ -0.78
CDPF1-203ENST00000404583 SFTA3P0C7M3 94 aa10.2□□□□□ -0.78
CDPF1-203ENST00000404583 ASIPP42127 132 aa10.2□□□□□ -0.78
CDPF1-203ENST00000404583 LINC01559Q495D7 138 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms