RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 ORM1P02763 201 aa8.9□□□□□ -0.98
LINC00339-201ENST00000404210 MIFP14174 115 aa8.9□□□□□ -0.98
LINC00339-201ENST00000404210 PNRC1Q12796 327 aaPredicted RBP8.9□□□□□ -0.98
LINC00339-201ENST00000404210 RRN3P1Q2M238 152 aa8.9□□□□□ -0.98
LINC00339-201ENST00000404210 ZNF493Q6ZR52 646 aa8.9□□□□□ -0.98
LINC00339-201ENST00000404210 NUDT10Q8NFP7 164 aa8.9□□□□□ -0.98
LINC00339-201ENST00000404210 NUDT11Q96G61 164 aa8.9□□□□□ -0.98
LINC00339-201ENST00000404210 C11orf21Q9P2W6 132 aa8.9□□□□□ -0.98
LINC00339-201ENST00000404210 KRBOX1C9JBD0 128 aa8.89□□□□□ -0.99
LINC00339-201ENST00000404210 HTN1P15515 57 aa8.89□□□□□ -0.99
LINC00339-201ENST00000404210 ADCYAP1P18509 176 aa8.89□□□□□ -0.99
LINC00339-201ENST00000404210 AZU1P20160 251 aa8.89□□□□□ -0.99
LINC00339-201ENST00000404210 MUC21Q5SSG8 566 aa8.89□□□□□ -0.99
LINC00339-201ENST00000404210 ISOC2Q96AB3 205 aa8.89□□□□□ -0.99
LINC00339-201ENST00000404210 RETNQ9HD89 108 aa8.89□□□□□ -0.99
LINC00339-201ENST00000404210 OSTCQ9NRP0 149 aa8.89□□□□□ -0.99
LINC00339-201ENST00000404210 TRGV11A0A075B6L2 103 aa8.88□□□□□ -0.99
LINC00339-201ENST00000404210 TMEM189A5PLL7 270 aa8.88□□□□□ -0.99
LINC00339-201ENST00000404210 CBY3A6NI87 242 aa8.88□□□□□ -0.99
LINC00339-201ENST00000404210 A6NJY4 79 aa8.88□□□□□ -0.99
LINC00339-201ENST00000404210 B4DEV8 164 aa8.88□□□□□ -0.99
LINC00339-201ENST00000404210 GNRH2O43555 120 aa8.88□□□□□ -0.99
LINC00339-201ENST00000404210 P01737 135 aa8.88□□□□□ -0.99
LINC00339-201ENST00000404210 PRM2P04554 102 aa8.88□□□□□ -0.99
LINC00339-201ENST00000404210 ERVFC1-1P60608 527 aa8.88□□□□□ -0.99
LINC00339-201ENST00000404210 ADIRFQ15847 76 aa8.88□□□□□ -0.99
LINC00339-201ENST00000404210 DNLZQ5SXM8 178 aa8.88□□□□□ -0.99
LINC00339-201ENST00000404210 IBA57Q5T440 356 aaKnown RBP8.88□□□□□ -0.99
LINC00339-201ENST00000404210 ZNF575Q86XF7 245 aa8.88□□□□□ -0.99
LINC00339-201ENST00000404210 TMEM263Q8WUH6 116 aaKnown RBP8.88□□□□□ -0.99
LINC00339-201ENST00000404210 C16orf74Q96GX8 76 aa8.88□□□□□ -0.99
LINC00339-201ENST00000404210 RNASE7Q9H1E1 156 aaKnown RBP8.88□□□□□ -0.99
LINC00339-201ENST00000404210 NAGKQ9UJ70 344 aa8.88□□□□□ -0.99
LINC00339-201ENST00000404210 TP53TG3Q9ULZ0 132 aa8.88□□□□□ -0.99
LINC00339-201ENST00000404210 CARHSP1Q9Y2V2 147 aaKnown RBP8.88□□□□□ -0.99
LINC00339-201ENST00000404210 GATCO43716 136 aaKnown RBP8.87□□□□□ -0.99
LINC00339-201ENST00000404210 TYMSP04818 313 aa8.87□□□□□ -0.99
LINC00339-201ENST00000404210 CXCL1P09341 107 aa8.87□□□□□ -0.99
LINC00339-201ENST00000404210 RPS20P60866 119 aaKnown RBP8.87□□□□□ -0.99
LINC00339-201ENST00000404210 Q8NAQ8 132 aa8.87□□□□□ -0.99
LINC00339-201ENST00000404210 RNASE8Q8TDE3 154 aaKnown RBP8.87□□□□□ -0.99
LINC00339-201ENST00000404210 XKRY2A2RUG3 117 aa8.86□□□□□ -0.99
LINC00339-201ENST00000404210 M0R036 132 aa8.86□□□□□ -0.99
LINC00339-201ENST00000404210 C15orf54Q8N8G6 183 aa8.86□□□□□ -0.99
LINC00339-201ENST00000404210 C11orf72Q8NBR9 251 aa8.86□□□□□ -0.99
LINC00339-201ENST00000404210 OR2D3Q8NGH3 330 aa8.86□□□□□ -0.99
LINC00339-201ENST00000404210 OR10G8Q8NGN5 311 aa8.86□□□□□ -0.99
LINC00339-201ENST00000404210 SFRP2Q96HF1 295 aa8.86□□□□□ -0.99
LINC00339-201ENST00000404210 IGHV3-16A0A0C4DH30 117 aa8.85□□□□□ -0.99
LINC00339-201ENST00000404210 IGHV4-28A0A0C4DH34 117 aa8.85□□□□□ -0.99
LINC00339-201ENST00000404210 PLAC8L1A1L4L8 177 aa8.85□□□□□ -0.99
LINC00339-201ENST00000404210 RPL19P84098 196 aaKnown RBP8.85□□□□□ -0.99
LINC00339-201ENST00000404210 CT83Q5H943 113 aa8.85□□□□□ -0.99
LINC00339-201ENST00000404210 SPXQ9BT56 116 aa8.85□□□□□ -0.99
LINC00339-201ENST00000404210 RPP21Q9H633 154 aaKnown RBP8.85□□□□□ -0.99
LINC00339-201ENST00000404210 MDFICQ9P1T7 246 aa8.85□□□□□ -0.99
LINC00339-201ENST00000404210 TMSB15BA0A087X1C1 80 aa8.84□□□□□ -0.99
LINC00339-201ENST00000404210 GRIFINA4D1Z8 144 aa8.84□□□□□ -0.99
LINC00339-201ENST00000404210 A8MWL6 223 aa8.84□□□□□ -0.99
LINC00339-201ENST00000404210 SNURFLB1AK76 121 aa8.84□□□□□ -0.99
LINC00339-201ENST00000404210 PPP1R2P9O14990 202 aa8.84□□□□□ -0.99
LINC00339-201ENST00000404210 RNASE3P12724 160 aaKnown RBP8.84□□□□□ -0.99
LINC00339-201ENST00000404210 S100A4P26447 101 aaKnown RBP8.84□□□□□ -0.99
LINC00339-201ENST00000404210 ASIPP42127 132 aa8.84□□□□□ -0.99
LINC00339-201ENST00000404210 TCL1AP56279 114 aa8.84□□□□□ -0.99
LINC00339-201ENST00000404210 ZNF415Q09FC8 603 aa8.84□□□□□ -0.99
LINC00339-201ENST00000404210 DAZ2Q13117 558 aaKnown RBP8.84□□□□□ -0.99
LINC00339-201ENST00000404210 ANAPC16Q96DE5 110 aa8.84□□□□□ -0.99
LINC00339-201ENST00000404210 C11orf68Q9H3H3 251 aaKnown RBP8.84□□□□□ -0.99
LINC00339-201ENST00000404210 GSN-AS1Q9NRJ2 163 aa8.84□□□□□ -0.99
LINC00339-201ENST00000404210 TIMM8BQ9Y5J9 83 aaPredicted RBP8.84□□□□□ -0.99
LINC00339-201ENST00000404210 V9GYV3 84 aa8.84□□□□□ -0.99
LINC00339-201ENST00000404210 MT-ND4LP03901 98 aa8.83□□□□□ -1
LINC00339-201ENST00000404210 MED14OSP0DP75 135 aa8.83□□□□□ -1
LINC00339-201ENST00000404210 FOXA3P55318 350 aaPredicted RBP8.83□□□□□ -1
LINC00339-201ENST00000404210 C9orf85Q96MD7 179 aa8.83□□□□□ -1
LINC00339-201ENST00000404210 SSBP4Q9BWG4 385 aaPredicted RBP8.83□□□□□ -1
LINC00339-201ENST00000404210 IL36BQ9NZH7 164 aa8.83□□□□□ -1
LINC00339-201ENST00000404210 A0A1W2PPQ1 181 aa8.82□□□□□ -1
LINC00339-201ENST00000404210 FAM231BA6NCW3 169 aa8.82□□□□□ -1
LINC00339-201ENST00000404210 LYRM9A8MSI8 78 aa8.82□□□□□ -1
LINC00339-201ENST00000404210 APOC3P02656 99 aa8.82□□□□□ -1
LINC00339-201ENST00000404210 ARMS2P0C7Q2 107 aa8.82□□□□□ -1
LINC00339-201ENST00000404210 RNF212Q495C1 297 aa8.82□□□□□ -1
LINC00339-201ENST00000404210 CLRN3Q8NCR9 226 aa8.82□□□□□ -1
LINC00339-201ENST00000404210 IL17DQ8TAD2 202 aa8.82□□□□□ -1
LINC00339-201ENST00000404210 TSKUQ8WUA8 353 aa8.82□□□□□ -1
LINC00339-201ENST00000404210 PTH2Q96A98 100 aa8.82□□□□□ -1
LINC00339-201ENST00000404210 GFRA4Q9GZZ7 299 aa8.82□□□□□ -1
LINC00339-201ENST00000404210 SCRT2Q9NQ03 307 aa8.82□□□□□ -1
LINC00339-201ENST00000404210 U3KQK5 164 aa8.82□□□□□ -1
LINC00339-201ENST00000404210 DNAH9Q9NYC9 4486 aa8.82□□□□□ -1
LINC00339-201ENST00000404210 A0A0J9YWU9 116 aa8.81□□□□□ -1
LINC00339-201ENST00000404210 F2Z2F3 143 aa8.81□□□□□ -1
LINC00339-201ENST00000404210 DEFB4AO15263 64 aa8.81□□□□□ -1
LINC00339-201ENST00000404210 SNAI2O43623 268 aa8.81□□□□□ -1
LINC00339-201ENST00000404210 SPINK4O60575 86 aa8.81□□□□□ -1
LINC00339-201ENST00000404210 SNAPINO95295 136 aa8.81□□□□□ -1
LINC00339-201ENST00000404210 OR5AL1P0C617 328 aa8.81□□□□□ -1
LINC00339-201ENST00000404210 IGLC6P0CF74 106 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms