RNA–Protein interactions for RNA: ENST00000400946.2

LINC01139-201, Transcript of long intergenic non-protein coding RNA 1139, humanhuman

TSL 1 (best) BASIC

Gene LINC01139, Length 1,537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01139-201ENST00000400946 C20orf78Q9BR46 151 aa6.69□□□□□ -1.34
LINC01139-201ENST00000400946 TRAV21A0A0B4J279 112 aa6.68□□□□□ -1.34
LINC01139-201ENST00000400946 G3V318 75 aa6.68□□□□□ -1.34
LINC01139-201ENST00000400946 H0Y8G0 127 aa6.68□□□□□ -1.34
LINC01139-201ENST00000400946 IGHG2P01859 326 aa6.68□□□□□ -1.34
LINC01139-201ENST00000400946 ERCC8Q13216 396 aa6.68□□□□□ -1.34
LINC01139-201ENST00000400946 LAGE3Q14657 143 aa6.68□□□□□ -1.34
LINC01139-201ENST00000400946 TAL2Q16559 108 aa6.68□□□□□ -1.34
LINC01139-201ENST00000400946 PRR31Q5SQ13 230 aa6.68□□□□□ -1.34
LINC01139-201ENST00000400946 MYOZ3Q8TDC0 251 aa6.68□□□□□ -1.34
LINC01139-201ENST00000400946 C16orf92Q96LL3 132 aa6.68□□□□□ -1.34
LINC01139-201ENST00000400946 ANKHD1Q8IWZ3 2542 aaKnown RBP6.67□□□□□ -1.34
LINC01139-201ENST00000400946 TRAV12-1A0A0B4J245 112 aa6.67□□□□□ -1.34
LINC01139-201ENST00000400946 A0A0G2JLM5 398 aa6.67□□□□□ -1.34
LINC01139-201ENST00000400946 C9orf118A6NHY6 69 aa6.67□□□□□ -1.34
LINC01139-201ENST00000400946 LINC01619G3V211 115 aa6.67□□□□□ -1.34
LINC01139-201ENST00000400946 K7EMT4 169 aa6.67□□□□□ -1.34
LINC01139-201ENST00000400946 DPM2O94777 84 aa6.67□□□□□ -1.34
LINC01139-201ENST00000400946 IGKCP01834 107 aa6.67□□□□□ -1.34
LINC01139-201ENST00000400946 TRGV3P03979 118 aa6.67□□□□□ -1.34
LINC01139-201ENST00000400946 PPIFP30405 207 aaKnown RBP6.67□□□□□ -1.34
LINC01139-201ENST00000400946 ARL3P36405 182 aa6.67□□□□□ -1.34
LINC01139-201ENST00000400946 CDKN1BP46527 198 aa6.67□□□□□ -1.34
LINC01139-201ENST00000400946 RPL32P62910 135 aaKnown RBP6.67□□□□□ -1.34
LINC01139-201ENST00000400946 IGFL4Q6B9Z1 124 aa6.67□□□□□ -1.34
LINC01139-201ENST00000400946 ADAMTSL5Q6ZMM2 481 aa6.67□□□□□ -1.34
LINC01139-201ENST00000400946 NRACQ8N912 160 aa6.67□□□□□ -1.34
LINC01139-201ENST00000400946 OR10J6PQ8NGY7 276 aa6.67□□□□□ -1.34
LINC01139-201ENST00000400946 FAM19A4Q96LR4 140 aa6.67□□□□□ -1.34
LINC01139-201ENST00000400946 AP1S3Q96PC3 154 aa6.67□□□□□ -1.34
LINC01139-201ENST00000400946 PIMREGQ9BSJ6 248 aa6.67□□□□□ -1.34
LINC01139-201ENST00000400946 MSRB1Q9NZV6 116 aa6.67□□□□□ -1.34
LINC01139-201ENST00000400946 HHLA3Q9XRX5 114 aa6.67□□□□□ -1.34
LINC01139-201ENST00000400946 TIMM8BQ9Y5J9 83 aaPredicted RBP6.67□□□□□ -1.34
LINC01139-201ENST00000400946 ASH1LQ9NR48 2969 aaKnown RBP6.67□□□□□ -1.34
LINC01139-201ENST00000400946 COL12A1Q99715 3063 aa6.67□□□□□ -1.34
LINC01139-201ENST00000400946 HIVEP3Q5T1R4 2406 aa6.66□□□□□ -1.34
LINC01139-201ENST00000400946 TMEM89A2RUT3 159 aa6.66□□□□□ -1.34
LINC01139-201ENST00000400946 A6NDX4 124 aa6.66□□□□□ -1.34
LINC01139-201ENST00000400946 SMKR1H3BMG3 65 aa6.66□□□□□ -1.34
LINC01139-201ENST00000400946 SOCS3O14543 225 aa6.66□□□□□ -1.34
LINC01139-201ENST00000400946 ORMDL2Q53FV1 153 aa6.66□□□□□ -1.34
LINC01139-201ENST00000400946 SPANXN1Q5VSR9 72 aa6.66□□□□□ -1.34
LINC01139-201ENST00000400946 RNF182Q8N6D2 247 aa6.66□□□□□ -1.34
LINC01139-201ENST00000400946 POM121L12Q8N7R1 296 aa6.66□□□□□ -1.34
LINC01139-201ENST00000400946 MCRIP2Q9BUT9 160 aaKnown RBP6.66□□□□□ -1.34
LINC01139-201ENST00000400946 C11orf21Q9P2W6 132 aa6.66□□□□□ -1.34
LINC01139-201ENST00000400946 ARHGAP32A7KAX9 2087 aa6.66□□□□□ -1.34
LINC01139-201ENST00000400946 ABCA1O95477 2261 aa6.66□□□□□ -1.34
LINC01139-201ENST00000400946 USP9XQ93008 2570 aaPredicted RBP6.66□□□□□ -1.34
LINC01139-201ENST00000400946 A0A087WX48 190 aa6.66□□□□□ -1.34
LINC01139-201ENST00000400946 CBY3A6NI87 242 aa6.66□□□□□ -1.34
LINC01139-201ENST00000400946 IGHV4-39P01824 125 aa6.66□□□□□ -1.34
LINC01139-201ENST00000400946 PRSS1P07477 247 aa6.66□□□□□ -1.34
LINC01139-201ENST00000400946 SMIM17P0DL12 118 aa6.66□□□□□ -1.34
LINC01139-201ENST00000400946 GATA3P23771 443 aa6.66□□□□□ -1.34
LINC01139-201ENST00000400946 PLNP26678 52 aa6.66□□□□□ -1.34
LINC01139-201ENST00000400946 FOXE3Q13461 319 aa6.66□□□□□ -1.34
LINC01139-201ENST00000400946 ZFAND2AQ8N6M9 145 aa6.66□□□□□ -1.34
LINC01139-201ENST00000400946 C10orf105Q8TEF2 133 aa6.66□□□□□ -1.34
LINC01139-201ENST00000400946 TMEM158Q8WZ71 300 aa6.66□□□□□ -1.34
LINC01139-201ENST00000400946 DOPEY2Q9Y3R5 2298 aa6.65□□□□□ -1.34
LINC01139-201ENST00000400946 IGHV3-35A0A0C4DH35 117 aa6.65□□□□□ -1.35
LINC01139-201ENST00000400946 LINC01548A6NM66 108 aa6.65□□□□□ -1.35
LINC01139-201ENST00000400946 NXPH4O95158 308 aa6.65□□□□□ -1.35
LINC01139-201ENST00000400946 ASIPP42127 132 aa6.65□□□□□ -1.35
LINC01139-201ENST00000400946 DSCR9P59020 149 aa6.65□□□□□ -1.35
LINC01139-201ENST00000400946 AMMECR1LQ6DCA0 310 aa6.65□□□□□ -1.35
LINC01139-201ENST00000400946 OR5A1Q8NGJ0 315 aa6.65□□□□□ -1.35
LINC01139-201ENST00000400946 ODF3Q96PU9 254 aa6.65□□□□□ -1.35
LINC01139-201ENST00000400946 SMIM2Q9BVW6 85 aa6.65□□□□□ -1.35
LINC01139-201ENST00000400946 TM2D2Q9BX73 214 aa6.65□□□□□ -1.35
LINC01139-201ENST00000400946 DPH3P1Q9H4G8 78 aa6.65□□□□□ -1.35
LINC01139-201ENST00000400946 DKK2Q9UBU2 259 aa6.65□□□□□ -1.35
LINC01139-201ENST00000400946 GAGE10A6NGK3 116 aa6.64□□□□□ -1.35
LINC01139-201ENST00000400946 CYSRT1A8MQ03 144 aa6.64□□□□□ -1.35
LINC01139-201ENST00000400946 K7ERU9 68 aa6.64□□□□□ -1.35
LINC01139-201ENST00000400946 IGLV1-40P01703 118 aa6.64□□□□□ -1.35
LINC01139-201ENST00000400946 RBX1P62877 108 aa6.64□□□□□ -1.35
LINC01139-201ENST00000400946 UFSP1Q6NVU6 142 aa6.64□□□□□ -1.35
LINC01139-201ENST00000400946 Q6ZVH6 145 aa6.64□□□□□ -1.35
LINC01139-201ENST00000400946 IGHV4OR15-8A0A075B7B6 117 aa6.63□□□□□ -1.35
LINC01139-201ENST00000400946 IGHV3OR16-8A0A075B7F1 116 aa6.63□□□□□ -1.35
LINC01139-201ENST00000400946 A0A087WW49 117 aa6.63□□□□□ -1.35
LINC01139-201ENST00000400946 TRAV8-6A0A0B4J262 113 aa6.63□□□□□ -1.35
LINC01139-201ENST00000400946 F8VRH5 84 aa6.63□□□□□ -1.35
LINC01139-201ENST00000400946 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.63□□□□□ -1.35
LINC01139-201ENST00000400946 H7C1H1 209 aa6.63□□□□□ -1.35
LINC01139-201ENST00000400946 SMIM13P0DJ93 91 aa6.63□□□□□ -1.35
LINC01139-201ENST00000400946 ID1P41134 155 aa6.63□□□□□ -1.35
LINC01139-201ENST00000400946 NMUP48645 174 aa6.63□□□□□ -1.35
LINC01139-201ENST00000400946 SUMO2P61956 95 aaKnown RBP6.63□□□□□ -1.35
LINC01139-201ENST00000400946 HIST2H2BCQ6DN03 193 aa6.63□□□□□ -1.35
LINC01139-201ENST00000400946 GPHB5Q86YW7 130 aa6.63□□□□□ -1.35
LINC01139-201ENST00000400946 FOXC2Q99958 501 aa6.63□□□□□ -1.35
LINC01139-201ENST00000400946 CST9LQ9H4G1 147 aa6.63□□□□□ -1.35
LINC01139-201ENST00000400946 LRRK2Q5S007 2527 aa6.63□□□□□ -1.35
LINC01139-201ENST00000400946 USP9YO00507 2555 aaPredicted RBP6.62□□□□□ -1.35
LINC01139-201ENST00000400946 FLNBO75369 2602 aaKnown RBP6.62□□□□□ -1.35
LINC01139-201ENST00000400946 IGHV3-66A0A0C4DH42 116 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms