RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 HIST1H2BOP23527 126 aa9.44□□□□□ -0.9
CACNA1C-213ENST00000399629 HIST1H2BBP33778 126 aa9.44□□□□□ -0.9
CACNA1C-213ENST00000399629 HIST1H2BDP58876 126 aa9.44□□□□□ -0.9
CACNA1C-213ENST00000399629 HIST1H2BCP62807 126 aa9.44□□□□□ -0.9
CACNA1C-213ENST00000399629 HIST2H2BEQ16778 126 aa9.44□□□□□ -0.9
CACNA1C-213ENST00000399629 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.44□□□□□ -0.9
CACNA1C-213ENST00000399629 HIST1H2BHQ93079 126 aa9.44□□□□□ -0.9
CACNA1C-213ENST00000399629 SIGMAR1Q99720 223 aa9.44□□□□□ -0.9
CACNA1C-213ENST00000399629 HIST1H2BNQ99877 126 aa9.44□□□□□ -0.9
CACNA1C-213ENST00000399629 HIST1H2BMQ99879 126 aa9.44□□□□□ -0.9
CACNA1C-213ENST00000399629 DYNAPQ8N1N2 210 aa9.43□□□□□ -0.9
CACNA1C-213ENST00000399629 B9D2Q9BPU9 175 aa9.43□□□□□ -0.9
CACNA1C-213ENST00000399629 SPATA25Q9BR10 227 aa9.43□□□□□ -0.9
CACNA1C-213ENST00000399629 IGHV7-81A0A0B4J1V7 117 aa9.43□□□□□ -0.9
CACNA1C-213ENST00000399629 TRAV4A0A0B4J268 109 aa9.43□□□□□ -0.9
CACNA1C-213ENST00000399629 NDUFA1O15239 70 aa9.43□□□□□ -0.9
CACNA1C-213ENST00000399629 CYTL1Q9NRR1 136 aa9.43□□□□□ -0.9
CACNA1C-213ENST00000399629 KIF26BQ2KJY2 2108 aa9.43□□□□□ -0.9
CACNA1C-213ENST00000399629 ZDBF2Q9HCK1 2354 aa9.43□□□□□ -0.9
CACNA1C-213ENST00000399629 SPRNQ5BIV9 151 aa9.43□□□□□ -0.9
CACNA1C-213ENST00000399629 MYLKQ15746 1914 aa9.43□□□□□ -0.9
CACNA1C-213ENST00000399629 FAM231BA6NCW3 169 aa9.43□□□□□ -0.9
CACNA1C-213ENST00000399629 PRSS57Q6UWY2 283 aa9.43□□□□□ -0.9
CACNA1C-213ENST00000399629 DEFB125Q8N687 156 aa9.43□□□□□ -0.9
CACNA1C-213ENST00000399629 ZNF491Q8N8L2 437 aa9.43□□□□□ -0.9
CACNA1C-213ENST00000399629 PI4KAP42356 2102 aa9.43□□□□□ -0.9
CACNA1C-213ENST00000399629 FREM3P0C091 2139 aa9.42□□□□□ -0.9
CACNA1C-213ENST00000399629 NLRC5Q86WI3 1866 aa9.42□□□□□ -0.9
CACNA1C-213ENST00000399629 RBAKDNA6NC62 111 aa9.42□□□□□ -0.9
CACNA1C-213ENST00000399629 MORN5Q5VZ52 161 aa9.42□□□□□ -0.9
CACNA1C-213ENST00000399629 TRBV24-1A0A075B6N3 115 aa9.41□□□□□ -0.9
CACNA1C-213ENST00000399629 UBE2CO00762 179 aa9.41□□□□□ -0.9
CACNA1C-213ENST00000399629 ARTNQ5T4W7 220 aa9.41□□□□□ -0.9
CACNA1C-213ENST00000399629 C20orf78Q9BR46 151 aa9.41□□□□□ -0.9
CACNA1C-213ENST00000399629 GTSF1LQ9H1H1 148 aa9.41□□□□□ -0.9
CACNA1C-213ENST00000399629 FUSP35637 526 aaKnown RBP eCLIP9.41□□□□□ -0.9
CACNA1C-213ENST00000399629 HIST2H2BCQ6DN03 193 aa9.41□□□□□ -0.9
CACNA1C-213ENST00000399629 IGHV4-31P0DP07 118 aa9.41□□□□□ -0.9
CACNA1C-213ENST00000399629 KIR3DS1Q14943 382 aa9.41□□□□□ -0.9
CACNA1C-213ENST00000399629 IGHV4-28A0A0C4DH34 117 aa9.41□□□□□ -0.9
CACNA1C-213ENST00000399629 LY6G6DO95868 133 aa9.41□□□□□ -0.9
CACNA1C-213ENST00000399629 C17orf77Q96MU5 243 aa9.41□□□□□ -0.9
CACNA1C-213ENST00000399629 HERV-K104P63124 156 aa9.4□□□□□ -0.9
CACNA1C-213ENST00000399629 CACNA1GO43497 2377 aa9.4□□□□□ -0.9
CACNA1C-213ENST00000399629 TINCRA0A1B0GVN0 87 aa9.4□□□□□ -0.9
CACNA1C-213ENST00000399629 C3orf79P0CE67 100 aa9.4□□□□□ -0.9
CACNA1C-213ENST00000399629 Q0VG73 95 aa9.4□□□□□ -0.9
CACNA1C-213ENST00000399629 TMEM89A2RUT3 159 aa9.4□□□□□ -0.9
CACNA1C-213ENST00000399629 LRRK1Q38SD2 2015 aa9.4□□□□□ -0.91
CACNA1C-213ENST00000399629 WFDC11Q8NEX6 87 aa9.4□□□□□ -0.91
CACNA1C-213ENST00000399629 NUP210Q8TEM1 1887 aaPredicted RBP9.39□□□□□ -0.91
CACNA1C-213ENST00000399629 NCR3O14931 201 aa9.39□□□□□ -0.91
CACNA1C-213ENST00000399629 KLK12Q9UKR0 248 aa9.39□□□□□ -0.91
CACNA1C-213ENST00000399629 SDK2Q58EX2 2172 aa9.39□□□□□ -0.91
CACNA1C-213ENST00000399629 IGLL1P15814 213 aa9.39□□□□□ -0.91
CACNA1C-213ENST00000399629 FXYD5Q96DB9 178 aa9.39□□□□□ -0.91
CACNA1C-213ENST00000399629 Q9H8V8 135 aa9.39□□□□□ -0.91
CACNA1C-213ENST00000399629 CACNA1IQ9P0X4 2223 aa9.39□□□□□ -0.91
CACNA1C-213ENST00000399629 ATRAIDQ6UW56 229 aa9.39□□□□□ -0.91
CACNA1C-213ENST00000399629 C16orf54Q6UWD8 224 aa9.39□□□□□ -0.91
CACNA1C-213ENST00000399629 SEM1Q6ZVN7 128 aa9.39□□□□□ -0.91
CACNA1C-213ENST00000399629 EGR2P11161 476 aaPredicted RBP9.39□□□□□ -0.91
CACNA1C-213ENST00000399629 SPANXA1Q9NS26 97 aa9.39□□□□□ -0.91
CACNA1C-213ENST00000399629 Q8N9W7 124 aa9.38□□□□□ -0.91
CACNA1C-213ENST00000399629 SVIPQ8NHG7 77 aa9.38□□□□□ -0.91
CACNA1C-213ENST00000399629 HIST1H2BLQ99880 126 aa9.38□□□□□ -0.91
CACNA1C-213ENST00000399629 ZNF124Q15973 351 aa9.38□□□□□ -0.91
CACNA1C-213ENST00000399629 IGLC7A0M8Q6 106 aa9.38□□□□□ -0.91
CACNA1C-213ENST00000399629 AGPAT4-IT1Q9H0P7 198 aa9.38□□□□□ -0.91
CACNA1C-213ENST00000399629 LY6G6CO95867 125 aa9.38□□□□□ -0.91
CACNA1C-213ENST00000399629 UTF1Q5T230 341 aa9.38□□□□□ -0.91
CACNA1C-213ENST00000399629 ORMDL1Q9P0S3 153 aa9.38□□□□□ -0.91
CACNA1C-213ENST00000399629 BVES-AS1Q5T3Y7 98 aa9.38□□□□□ -0.91
CACNA1C-213ENST00000399629 FGF6P10767 208 aa9.37□□□□□ -0.91
CACNA1C-213ENST00000399629 LENEPQ9Y5L5 61 aa9.37□□□□□ -0.91
CACNA1C-213ENST00000399629 COL6A6A6NMZ7 2263 aa9.37□□□□□ -0.91
CACNA1C-213ENST00000399629 IGKV2-24A0A0C4DH68 120 aa9.37□□□□□ -0.91
CACNA1C-213ENST00000399629 LTAP01374 205 aa9.37□□□□□ -0.91
CACNA1C-213ENST00000399629 TRACP01848 142 aa9.37□□□□□ -0.91
CACNA1C-213ENST00000399629 PCP4P48539 62 aa9.37□□□□□ -0.91
CACNA1C-213ENST00000399629 J3QQQ9 107 aa9.37□□□□□ -0.91
CACNA1C-213ENST00000399629 CYYR1Q96J86 154 aa9.37□□□□□ -0.91
CACNA1C-213ENST00000399629 C19orf84I3L1E1 186 aa9.36□□□□□ -0.91
CACNA1C-213ENST00000399629 VSIG2Q96IQ7 327 aa9.36□□□□□ -0.91
CACNA1C-213ENST00000399629 NPYP01303 97 aa9.36□□□□□ -0.91
CACNA1C-213ENST00000399629 COX7B2Q8TF08 81 aa9.36□□□□□ -0.91
CACNA1C-213ENST00000399629 RITA1Q96K30 269 aa9.36□□□□□ -0.91
CACNA1C-213ENST00000399629 UBE2D1P51668 147 aa9.36□□□□□ -0.91
CACNA1C-213ENST00000399629 CACNA1EQ15878 2313 aa9.36□□□□□ -0.91
CACNA1C-213ENST00000399629 DEFB131BA0A096LNP1 70 aa9.36□□□□□ -0.91
CACNA1C-213ENST00000399629 C7orf33Q8WU49 177 aa9.36□□□□□ -0.91
CACNA1C-213ENST00000399629 FAM110AQ9BQ89 295 aa9.36□□□□□ -0.91
CACNA1C-213ENST00000399629 K7EMT4 169 aa9.35□□□□□ -0.91
CACNA1C-213ENST00000399629 HIST3H2BBQ8N257 126 aa9.35□□□□□ -0.91
CACNA1C-213ENST00000399629 PROP1O75360 226 aa9.35□□□□□ -0.91
CACNA1C-213ENST00000399629 KMT2EQ8IZD2 1858 aa9.35□□□□□ -0.91
CACNA1C-213ENST00000399629 NCKAP5O14513 1909 aa9.35□□□□□ -0.91
CACNA1C-213ENST00000399629 CRYGDP07320 174 aa9.35□□□□□ -0.91
CACNA1C-213ENST00000399629 FHL1Q13642 323 aa9.35□□□□□ -0.91
CACNA1C-213ENST00000399629 MPDZO75970 2070 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms