RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 A0A1B0GVG6 124 aa9.86□□□□□ -0.83
HLA-DQB1-202ENST00000399079 PEX7O00628 323 aa9.86□□□□□ -0.83
HLA-DQB1-202ENST00000399079 GCGP01275 180 aa9.86□□□□□ -0.83
HLA-DQB1-202ENST00000399079 CST9LP1Q5W188 147 aa9.86□□□□□ -0.83
HLA-DQB1-202ENST00000399079 C11orf21Q9P2W6 132 aa9.86□□□□□ -0.83
HLA-DQB1-202ENST00000399079 ARL2-SNX15V9GYD0 113 aa9.86□□□□□ -0.83
HLA-DQB1-202ENST00000399079 TRGV11A0A075B6L2 103 aa9.85□□□□□ -0.83
HLA-DQB1-202ENST00000399079 PAGE4O60829 102 aa9.85□□□□□ -0.83
HLA-DQB1-202ENST00000399079 H2AFB1P0C5Y9 115 aa9.85□□□□□ -0.83
HLA-DQB1-202ENST00000399079 UBE2DNLQ8IWF7 75 aa9.85□□□□□ -0.83
HLA-DQB1-202ENST00000399079 HIST1H2BAQ96A08 127 aa9.85□□□□□ -0.83
HLA-DQB1-202ENST00000399079 C18orf15Q96N68 181 aa9.85□□□□□ -0.83
HLA-DQB1-202ENST00000399079 IGHV3-53P01767 116 aa9.84□□□□□ -0.83
HLA-DQB1-202ENST00000399079 TYMSP04818 313 aa9.84□□□□□ -0.83
HLA-DQB1-202ENST00000399079 LGALS9BQ3B8N2 356 aa9.84□□□□□ -0.83
HLA-DQB1-202ENST00000399079 SMUG1Q53HV7 270 aa9.84□□□□□ -0.83
HLA-DQB1-202ENST00000399079 SAPCD1Q5SSQ6 148 aa9.84□□□□□ -0.83
HLA-DQB1-202ENST00000399079 DMRTA1Q5VZB9 504 aa9.84□□□□□ -0.83
HLA-DQB1-202ENST00000399079 DPPA3Q6W0C5 159 aa9.84□□□□□ -0.83
HLA-DQB1-202ENST00000399079 EPPK1P58107 5090 aaKnown RBP9.83□□□□□ -0.84
HLA-DQB1-202ENST00000399079 IGHV3-16A0A0C4DH30 117 aa9.83□□□□□ -0.84
HLA-DQB1-202ENST00000399079 FBLL1A6NHQ2 334 aaKnown RBP9.83□□□□□ -0.84
HLA-DQB1-202ENST00000399079 PFN1P07737 140 aaKnown RBP9.83□□□□□ -0.84
HLA-DQB1-202ENST00000399079 ZFP69Q49AA0 526 aa9.83□□□□□ -0.84
HLA-DQB1-202ENST00000399079 DNAH6Q9C0G6 4158 aa9.83□□□□□ -0.84
HLA-DQB1-202ENST00000399079 PPT1P50897 306 aa9.82□□□□□ -0.84
HLA-DQB1-202ENST00000399079 CCL20P78556 96 aa9.82□□□□□ -0.84
HLA-DQB1-202ENST00000399079 Q86TA4 180 aa9.82□□□□□ -0.84
HLA-DQB1-202ENST00000399079 KCNS1Q96KK3 526 aa9.82□□□□□ -0.84
HLA-DQB1-202ENST00000399079 SPXQ9BT56 116 aa9.82□□□□□ -0.84
HLA-DQB1-202ENST00000399079 SDF2L1Q9HCN8 221 aa9.82□□□□□ -0.84
HLA-DQB1-202ENST00000399079 MUC4Q99102 2169 aa9.82□□□□□ -0.84
HLA-DQB1-202ENST00000399079 M0R2N4 97 aa9.82□□□□□ -0.84
HLA-DQB1-202ENST00000399079 SFTA3P0C7M3 94 aa9.82□□□□□ -0.84
HLA-DQB1-202ENST00000399079 RNF212Q495C1 297 aa9.82□□□□□ -0.84
HLA-DQB1-202ENST00000399079 SLC51BQ86UW2 128 aa9.82□□□□□ -0.84
HLA-DQB1-202ENST00000399079 C9orf62Q8N4C0 152 aa9.82□□□□□ -0.84
HLA-DQB1-202ENST00000399079 RASL10AQ92737 203 aa9.82□□□□□ -0.84
HLA-DQB1-202ENST00000399079 VSIG2Q96IQ7 327 aa9.82□□□□□ -0.84
HLA-DQB1-202ENST00000399079 IGLV2-18A0A075B6J9 118 aa9.81□□□□□ -0.84
HLA-DQB1-202ENST00000399079 UBE2G1P62253 170 aa9.81□□□□□ -0.84
HLA-DQB1-202ENST00000399079 EIF5AL1Q6IS14 154 aaKnown RBP9.81□□□□□ -0.84
HLA-DQB1-202ENST00000399079 SULT1A2P50226 295 aa9.8□□□□□ -0.84
HLA-DQB1-202ENST00000399079 CRIP1P50238 77 aa9.8□□□□□ -0.84
HLA-DQB1-202ENST00000399079 ZC2HC1AQ96GY0 325 aa9.8□□□□□ -0.84
HLA-DQB1-202ENST00000399079 FMC1Q96HJ9 113 aa9.8□□□□□ -0.84
HLA-DQB1-202ENST00000399079 ZNF479Q96JC4 524 aa9.8□□□□□ -0.84
HLA-DQB1-202ENST00000399079 NACAE9PAV3 2078 aa9.8□□□□□ -0.84
HLA-DQB1-202ENST00000399079 IGKV3D-20A0A0C4DH25 116 aa9.79□□□□□ -0.84
HLA-DQB1-202ENST00000399079 SCO2A0A1W2PP80 73 aa9.79□□□□□ -0.84
HLA-DQB1-202ENST00000399079 M0R2P5 195 aa9.79□□□□□ -0.84
HLA-DQB1-202ENST00000399079 RAB5CP51148 216 aa9.79□□□□□ -0.84
HLA-DQB1-202ENST00000399079 FHL2Q14192 279 aa9.79□□□□□ -0.84
HLA-DQB1-202ENST00000399079 TCEAL7Q9BRU2 100 aa9.79□□□□□ -0.84
HLA-DQB1-202ENST00000399079 GNG13Q9P2W3 67 aa9.79□□□□□ -0.84
HLA-DQB1-202ENST00000399079 ZFP30Q9Y2G7 519 aa9.79□□□□□ -0.84
HLA-DQB1-202ENST00000399079 LINC00588Q9Y4M8 146 aa9.79□□□□□ -0.84
HLA-DQB1-202ENST00000399079 TRAV1-1A0A0B4J248 108 aa9.78□□□□□ -0.84
HLA-DQB1-202ENST00000399079 FABP5P3A8MUU1 101 aa9.78□□□□□ -0.84
HLA-DQB1-202ENST00000399079 C9JCJ5 164 aa9.78□□□□□ -0.84
HLA-DQB1-202ENST00000399079 H3BNG1 76 aa9.78□□□□□ -0.84
HLA-DQB1-202ENST00000399079 LTAP01374 205 aa9.78□□□□□ -0.84
HLA-DQB1-202ENST00000399079 AKR1C3P42330 323 aa9.78□□□□□ -0.84
HLA-DQB1-202ENST00000399079 CCL18P55774 89 aa9.78□□□□□ -0.84
HLA-DQB1-202ENST00000399079 NHLRC2Q8NBF2 726 aa9.78□□□□□ -0.84
HLA-DQB1-202ENST00000399079 HHLA3Q9XRX5 114 aa9.78□□□□□ -0.84
HLA-DQB1-202ENST00000399079 A0A096LPF7 62 aa9.77□□□□□ -0.84
HLA-DQB1-202ENST00000399079 PAX4O43316 350 aa9.77□□□□□ -0.84
HLA-DQB1-202ENST00000399079 RNASE3P12724 160 aaKnown RBP9.77□□□□□ -0.84
HLA-DQB1-202ENST00000399079 NKX2-5P52952 324 aaPredicted RBP9.77□□□□□ -0.84
HLA-DQB1-202ENST00000399079 PRO0255Q9UI72 69 aa9.77□□□□□ -0.84
HLA-DQB1-202ENST00000399079 TRGV4A0A0C4DH28 118 aa9.77□□□□□ -0.85
HLA-DQB1-202ENST00000399079 TRBV6-1A0A0K0K1D8 114 aa9.77□□□□□ -0.85
HLA-DQB1-202ENST00000399079 SH2D1AO60880 128 aa9.77□□□□□ -0.85
HLA-DQB1-202ENST00000399079 ORM1P02763 201 aa9.77□□□□□ -0.85
HLA-DQB1-202ENST00000399079 CRYBA4P53673 196 aa9.77□□□□□ -0.85
HLA-DQB1-202ENST00000399079 ESRGQ1W209 222 aa9.77□□□□□ -0.85
HLA-DQB1-202ENST00000399079 ZNF876PQ49A33 203 aa9.77□□□□□ -0.85
HLA-DQB1-202ENST00000399079 COX8CQ7Z4L0 72 aa9.77□□□□□ -0.85
HLA-DQB1-202ENST00000399079 C9orf85Q96MD7 179 aa9.77□□□□□ -0.85
HLA-DQB1-202ENST00000399079 DNAH10Q8IVF4 4471 aa9.76□□□□□ -0.85
HLA-DQB1-202ENST00000399079 TRAV4A0A0B4J268 109 aa9.76□□□□□ -0.85
HLA-DQB1-202ENST00000399079 M0R036 132 aa9.76□□□□□ -0.85
HLA-DQB1-202ENST00000399079 FAM162BQ5T6X4 162 aa9.76□□□□□ -0.85
HLA-DQB1-202ENST00000399079 OR4C5Q8NGB2 326 aa9.76□□□□□ -0.85
HLA-DQB1-202ENST00000399079 ZNRF2Q8NHG8 242 aa9.76□□□□□ -0.85
HLA-DQB1-202ENST00000399079 MANBALQ9NQG1 85 aa9.76□□□□□ -0.85
HLA-DQB1-202ENST00000399079 DNAH2Q9P225 4427 aa9.75□□□□□ -0.85
HLA-DQB1-202ENST00000399079 PGPEP1LA6NFU8 196 aa9.75□□□□□ -0.85
HLA-DQB1-202ENST00000399079 B4DEV8 164 aa9.75□□□□□ -0.85
HLA-DQB1-202ENST00000399079 FAM3BP58499 235 aaPredicted RBP9.75□□□□□ -0.85
HLA-DQB1-202ENST00000399079 ZNF674Q2M3X9 581 aa9.75□□□□□ -0.85
HLA-DQB1-202ENST00000399079 ALKAL2Q6UX46 152 aa9.75□□□□□ -0.85
HLA-DQB1-202ENST00000399079 Q6ZR54 194 aa9.75□□□□□ -0.85
HLA-DQB1-202ENST00000399079 ZNF575Q86XF7 245 aa9.75□□□□□ -0.85
HLA-DQB1-202ENST00000399079 DERL1Q9BUN8 251 aa9.75□□□□□ -0.85
HLA-DQB1-202ENST00000399079 KRBOX1C9JBD0 128 aa9.74□□□□□ -0.85
HLA-DQB1-202ENST00000399079 TEX46H3BTG2 121 aa9.74□□□□□ -0.85
HLA-DQB1-202ENST00000399079 S100A4P26447 101 aaKnown RBP9.74□□□□□ -0.85
HLA-DQB1-202ENST00000399079 SLAQ13239 276 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms