RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 WFDC10AQ9H1F0 79 aa14.31□□□□□ -0.12
PDLIM2-205ENST00000397761 NBEAL1Q6ZS30 2694 aa14.31□□□□□ -0.12
PDLIM2-205ENST00000397761 IGLC6P0CF74 106 aa14.31□□□□□ -0.12
PDLIM2-205ENST00000397761 TRAV12-2A0A075B6T6 113 aa14.3□□□□□ -0.12
PDLIM2-205ENST00000397761 AMBPP02760 352 aa14.3□□□□□ -0.12
PDLIM2-205ENST00000397761 TDRG1Q3Y452 100 aa14.3□□□□□ -0.12
PDLIM2-205ENST00000397761 CMYA5Q8N3K9 4069 aa14.3□□□□□ -0.12
PDLIM2-205ENST00000397761 TMSB15BA0A087X1C1 80 aa14.29□□□□□ -0.12
PDLIM2-205ENST00000397761 TRAV12-3A0A0B4J271 114 aa14.29□□□□□ -0.12
PDLIM2-205ENST00000397761 DNLZQ5SXM8 178 aa14.29□□□□□ -0.12
PDLIM2-205ENST00000397761 Q8N1Y9 231 aa14.29□□□□□ -0.12
PDLIM2-205ENST00000397761 CTRLP40313 264 aa14.28□□□□□ -0.12
PDLIM2-205ENST00000397761 EGFEM1PQ0D2K5 195 aa14.28□□□□□ -0.12
PDLIM2-205ENST00000397761 C20orf144Q9BQM9 153 aa14.28□□□□□ -0.12
PDLIM2-205ENST00000397761 FXYD7P58549 80 aa14.27□□□□□ -0.12
PDLIM2-205ENST00000397761 ANXA2RQ3ZCQ2 193 aa14.27□□□□□ -0.12
PDLIM2-205ENST00000397761 ATP5L2Q7Z4Y8 100 aa14.27□□□□□ -0.12
PDLIM2-205ENST00000397761 SRD5A3Q9H8P0 318 aa14.27□□□□□ -0.12
PDLIM2-205ENST00000397761 A0A1B0GXF2 115 aa14.26□□□□□ -0.13
PDLIM2-205ENST00000397761 RBMY1A1P0DJD3 496 aaKnown RBP14.26□□□□□ -0.13
PDLIM2-205ENST00000397761 RBMY1CP0DJD4 496 aa14.26□□□□□ -0.13
PDLIM2-205ENST00000397761 NUTF2P61970 127 aaKnown RBP14.26□□□□□ -0.13
PDLIM2-205ENST00000397761 RBMY1FQ15415 496 aaKnown RBP14.26□□□□□ -0.13
PDLIM2-205ENST00000397761 OXLD1Q5BKU9 147 aa14.26□□□□□ -0.13
PDLIM2-205ENST00000397761 RASL11AQ6T310 242 aa14.26□□□□□ -0.13
PDLIM2-205ENST00000397761 DEFB125Q8N687 156 aa14.26□□□□□ -0.13
PDLIM2-205ENST00000397761 KCNS1Q96KK3 526 aa14.26□□□□□ -0.13
PDLIM2-205ENST00000397761 PGLYRP4Q96LB8 373 aa14.26□□□□□ -0.13
PDLIM2-205ENST00000397761 SSBP4Q9BWG4 385 aaPredicted RBP14.26□□□□□ -0.13
PDLIM2-205ENST00000397761 CNFNQ9BYD5 112 aa14.26□□□□□ -0.13
PDLIM2-205ENST00000397761 MGAM2Q2M2H8 2515 aa14.26□□□□□ -0.13
PDLIM2-205ENST00000397761 MUC4Q99102 2169 aa14.26□□□□□ -0.13
PDLIM2-205ENST00000397761 GRIFINA4D1Z8 144 aa14.25□□□□□ -0.13
PDLIM2-205ENST00000397761 GIG44P09565 113 aaPredicted RBP14.25□□□□□ -0.13
PDLIM2-205ENST00000397761 FER1L6-AS1Q8NA97 138 aa14.25□□□□□ -0.13
PDLIM2-205ENST00000397761 INSP01308 110 aa14.25□□□□□ -0.13
PDLIM2-205ENST00000397761 OR5AL1P0C617 328 aa14.25□□□□□ -0.13
PDLIM2-205ENST00000397761 COX19Q49B96 90 aa14.25□□□□□ -0.13
PDLIM2-205ENST00000397761 MUC21Q5SSG8 566 aa14.25□□□□□ -0.13
PDLIM2-205ENST00000397761 MORN3Q6PF18 240 aaPredicted RBP14.25□□□□□ -0.13
PDLIM2-205ENST00000397761 LYZL1Q6UWQ5 148 aa14.25□□□□□ -0.13
PDLIM2-205ENST00000397761 FAM159AQ6UWV7 190 aa14.25□□□□□ -0.13
PDLIM2-205ENST00000397761 LINC00467Q9BRT7 94 aa14.25□□□□□ -0.13
PDLIM2-205ENST00000397761 NAGKQ9UJ70 344 aa14.25□□□□□ -0.13
PDLIM2-205ENST00000397761 IGHV1OR15-1A0A075B7D0 117 aa14.24□□□□□ -0.13
PDLIM2-205ENST00000397761 A0A1B0GUT8 65 aa14.24□□□□□ -0.13
PDLIM2-205ENST00000397761 SNAI2O43623 268 aa14.24□□□□□ -0.13
PDLIM2-205ENST00000397761 FRMD6-AS1P0C7T7 363 aa14.24□□□□□ -0.13
PDLIM2-205ENST00000397761 MED14OSP0DP75 135 aa14.24□□□□□ -0.13
PDLIM2-205ENST00000397761 RPS10P46783 165 aaKnown RBP14.24□□□□□ -0.13
PDLIM2-205ENST00000397761 F2Z2F3 143 aa14.23□□□□□ -0.13
PDLIM2-205ENST00000397761 SPINK4O60575 86 aa14.23□□□□□ -0.13
PDLIM2-205ENST00000397761 MRPL54Q6P161 138 aaKnown RBP14.23□□□□□ -0.13
PDLIM2-205ENST00000397761 ARMS2P0C7Q2 107 aa14.22□□□□□ -0.13
PDLIM2-205ENST00000397761 WDR73Q6P4I2 378 aa14.22□□□□□ -0.13
PDLIM2-205ENST00000397761 GNB1LQ9BYB4 327 aa14.22□□□□□ -0.13
PDLIM2-205ENST00000397761 SCRT2Q9NQ03 307 aa14.22□□□□□ -0.13
PDLIM2-205ENST00000397761 XCL2Q9UBD3 114 aa14.22□□□□□ -0.13
PDLIM2-205ENST00000397761 ZMAT5Q9UDW3 170 aaKnown RBP14.22□□□□□ -0.13
PDLIM2-205ENST00000397761 A0A1B0GW15 77 aa14.21□□□□□ -0.13
PDLIM2-205ENST00000397761 PHOX2AO14813 284 aa14.21□□□□□ -0.13
PDLIM2-205ENST00000397761 GNRH2O43555 120 aa14.21□□□□□ -0.13
PDLIM2-205ENST00000397761 ASIPP42127 132 aa14.21□□□□□ -0.13
PDLIM2-205ENST00000397761 KRTAP10-11P60412 298 aa14.21□□□□□ -0.13
PDLIM2-205ENST00000397761 HBBP68871 147 aa14.21□□□□□ -0.13
PDLIM2-205ENST00000397761 TMEM256Q8N2U0 113 aa14.21□□□□□ -0.13
PDLIM2-205ENST00000397761 C1QTNF4Q9BXJ3 329 aa14.21□□□□□ -0.13
PDLIM2-205ENST00000397761 IGHV4-4A0A075B6R2 117 aa14.2□□□□□ -0.14
PDLIM2-205ENST00000397761 RNASE3P12724 160 aaKnown RBP14.2□□□□□ -0.14
PDLIM2-205ENST00000397761 RPL35AP18077 110 aaKnown RBP14.2□□□□□ -0.14
PDLIM2-205ENST00000397761 RIGQ13278 110 aa14.2□□□□□ -0.14
PDLIM2-205ENST00000397761 TMEM136Q6ZRR5 245 aa14.2□□□□□ -0.14
PDLIM2-205ENST00000397761 GATD1Q8NB37 220 aa14.2□□□□□ -0.14
PDLIM2-205ENST00000397761 IGHV3-16A0A0C4DH30 117 aa14.19□□□□□ -0.14
PDLIM2-205ENST00000397761 MT-ND6P03923 174 aa14.19□□□□□ -0.14
PDLIM2-205ENST00000397761 SAMD5Q5TGI4 173 aa14.19□□□□□ -0.14
PDLIM2-205ENST00000397761 C1orf158Q8N1D5 194 aa14.19□□□□□ -0.14
PDLIM2-205ENST00000397761 CSNK1G2-AS1Q8NCQ2 148 aa14.19□□□□□ -0.14
PDLIM2-205ENST00000397761 BORCS7Q96B45 105 aa14.19□□□□□ -0.14
PDLIM2-205ENST00000397761 TPPP3Q9BW30 176 aa14.19□□□□□ -0.14
PDLIM2-205ENST00000397761 NOTCH1P46531 2555 aa14.19□□□□□ -0.14
PDLIM2-205ENST00000397761 H3BVH4 76 aa14.18□□□□□ -0.14
PDLIM2-205ENST00000397761 C9orf85Q96MD7 179 aa14.18□□□□□ -0.14
PDLIM2-205ENST00000397761 TP53TG3Q9ULZ0 132 aa14.18□□□□□ -0.14
PDLIM2-205ENST00000397761 TRGV11A0A075B6L2 103 aa14.18□□□□□ -0.14
PDLIM2-205ENST00000397761 HLA-DQA1P01909 254 aa14.18□□□□□ -0.14
PDLIM2-205ENST00000397761 TRGC2P03986 189 aa14.18□□□□□ -0.14
PDLIM2-205ENST00000397761 OR10AG1Q8NH19 301 aa14.18□□□□□ -0.14
PDLIM2-205ENST00000397761 DNAH3Q8TD57 4116 aa14.17□□□□□ -0.14
PDLIM2-205ENST00000397761 SNURFLB1AK76 121 aa14.17□□□□□ -0.14
PDLIM2-205ENST00000397761 NXPH4O95158 308 aa14.17□□□□□ -0.14
PDLIM2-205ENST00000397761 S100A8P05109 93 aa14.17□□□□□ -0.14
PDLIM2-205ENST00000397761 S100A4P26447 101 aaKnown RBP14.17□□□□□ -0.14
PDLIM2-205ENST00000397761 CACNG7P62955 275 aa14.17□□□□□ -0.14
PDLIM2-205ENST00000397761 ZNF493Q6ZR52 646 aa14.17□□□□□ -0.14
PDLIM2-205ENST00000397761 CSTL1Q9H114 145 aa14.17□□□□□ -0.14
PDLIM2-205ENST00000397761 KIR2DL5BA0A0G2JN68 375 aa14.16□□□□□ -0.14
PDLIM2-205ENST00000397761 KIR2DL5BA0A0G2JPC4 375 aa14.16□□□□□ -0.14
PDLIM2-205ENST00000397761 G3V4G9 280 aa14.16□□□□□ -0.14
PDLIM2-205ENST00000397761 NTF3P20783 257 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms