RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 LINC00477Q96M19 166 aa12.54□□□□□ -0.4
TRIM39-205ENST00000396551 SCRT2Q9NQ03 307 aa12.54□□□□□ -0.4
TRIM39-205ENST00000396551 IGKV3-7A0A075B6H7 116 aa12.54□□□□□ -0.4
TRIM39-205ENST00000396551 TNFRSF6BO95407 300 aa12.54□□□□□ -0.4
TRIM39-205ENST00000396551 ANKRD17O75179 2603 aaKnown RBP12.54□□□□□ -0.4
TRIM39-205ENST00000396551 F6UB75 175 aa12.53□□□□□ -0.4
TRIM39-205ENST00000396551 OVOL1O14753 267 aa12.53□□□□□ -0.4
TRIM39-205ENST00000396551 SNAI2O43623 268 aa12.53□□□□□ -0.4
TRIM39-205ENST00000396551 MAP1LC3AQ9H492 121 aa12.53□□□□□ -0.4
TRIM39-205ENST00000396551 ZNF580Q9UK33 172 aa12.53□□□□□ -0.4
TRIM39-205ENST00000396551 ZFYVE26Q68DK2 2539 aa12.53□□□□□ -0.4
TRIM39-205ENST00000396551 LINC01546A6NGU7 62 aa12.53□□□□□ -0.4
TRIM39-205ENST00000396551 RPL11P62913 178 aaKnown RBP12.53□□□□□ -0.4
TRIM39-205ENST00000396551 PSMB8P28062 276 aa12.52□□□□□ -0.4
TRIM39-205ENST00000396551 OR10J6PQ8NGY7 276 aa12.52□□□□□ -0.4
TRIM39-205ENST00000396551 A1L4Q6 167 aa12.52□□□□□ -0.41
TRIM39-205ENST00000396551 FAM19A4Q96LR4 140 aa12.52□□□□□ -0.41
TRIM39-205ENST00000396551 DAZ1Q9NQZ3 744 aaKnown RBP12.52□□□□□ -0.41
TRIM39-205ENST00000396551 PEF1Q9UBV8 284 aaKnown RBP12.52□□□□□ -0.41
TRIM39-205ENST00000396551 ZNF462Q96JM2 2506 aa12.52□□□□□ -0.41
TRIM39-205ENST00000396551 IGHV4-4A0A075B6R2 117 aa12.52□□□□□ -0.41
TRIM39-205ENST00000396551 H3BVH4 76 aa12.52□□□□□ -0.41
TRIM39-205ENST00000396551 MS4A6AQ9H2W1 248 aa12.52□□□□□ -0.41
TRIM39-205ENST00000396551 SMPXQ9UHP9 88 aa12.52□□□□□ -0.41
TRIM39-205ENST00000396551 TGFAP01135 160 aa12.51□□□□□ -0.41
TRIM39-205ENST00000396551 COX6B1P14854 86 aa12.51□□□□□ -0.41
TRIM39-205ENST00000396551 SRD5A1P18405 259 aa12.51□□□□□ -0.41
TRIM39-205ENST00000396551 KIR3DS1Q14943 382 aa12.5□□□□□ -0.41
TRIM39-205ENST00000396551 SLC25A34Q6PIV7 304 aa12.5□□□□□ -0.41
TRIM39-205ENST00000396551 CR1P17927 2039 aa12.5□□□□□ -0.41
TRIM39-205ENST00000396551 LGALS9BQ3B8N2 356 aa12.5□□□□□ -0.41
TRIM39-205ENST00000396551 LGALS9CQ6DKI2 356 aa12.5□□□□□ -0.41
TRIM39-205ENST00000396551 CACNG7P62955 275 aa12.5□□□□□ -0.41
TRIM39-205ENST00000396551 WFDC3Q8IUB2 231 aa12.5□□□□□ -0.41
TRIM39-205ENST00000396551 IFI27L1Q96BM0 104 aa12.5□□□□□ -0.41
TRIM39-205ENST00000396551 ZANQ9Y493 2812 aa12.49□□□□□ -0.41
TRIM39-205ENST00000396551 POLQO75417 2590 aa12.49□□□□□ -0.41
TRIM39-205ENST00000396551 IGLV2-18A0A075B6J9 118 aa12.49□□□□□ -0.41
TRIM39-205ENST00000396551 TRAV26-2A0A0B4J265 109 aa12.49□□□□□ -0.41
TRIM39-205ENST00000396551 J3QLI3 93 aa12.49□□□□□ -0.41
TRIM39-205ENST00000396551 SPRY2O43597 315 aa12.49□□□□□ -0.41
TRIM39-205ENST00000396551 SPANXN1Q5VSR9 72 aa12.49□□□□□ -0.41
TRIM39-205ENST00000396551 UFC1Q9Y3C8 167 aa12.49□□□□□ -0.41
TRIM39-205ENST00000396551 KRTAP10-9P60411 292 aa12.49□□□□□ -0.41
TRIM39-205ENST00000396551 ZNF843Q8N446 348 aa12.49□□□□□ -0.41
TRIM39-205ENST00000396551 NRACQ8N912 160 aa12.49□□□□□ -0.41
TRIM39-205ENST00000396551 CSTL1Q9H114 145 aa12.49□□□□□ -0.41
TRIM39-205ENST00000396551 TRAV21A0A0B4J279 112 aa12.49□□□□□ -0.41
TRIM39-205ENST00000396551 K7EMT4 169 aa12.49□□□□□ -0.41
TRIM39-205ENST00000396551 OR2K2Q8NGT1 345 aa12.49□□□□□ -0.41
TRIM39-205ENST00000396551 NXT2Q9NPJ8 142 aaKnown RBP12.49□□□□□ -0.41
TRIM39-205ENST00000396551 UBR5O95071 2799 aaPredicted RBP12.48□□□□□ -0.41
TRIM39-205ENST00000396551 FAM208BQ5VWN6 2430 aa12.48□□□□□ -0.41
TRIM39-205ENST00000396551 RNF223E7ERA6 249 aa12.48□□□□□ -0.41
TRIM39-205ENST00000396551 CCL25O15444 150 aa12.48□□□□□ -0.41
TRIM39-205ENST00000396551 APRG1Q8IVJ8 170 aa12.48□□□□□ -0.41
TRIM39-205ENST00000396551 USP9YO00507 2555 aaPredicted RBP12.48□□□□□ -0.41
TRIM39-205ENST00000396551 LEPP41159 167 aa12.48□□□□□ -0.41
TRIM39-205ENST00000396551 ANXA2RQ3ZCQ2 193 aa12.47□□□□□ -0.41
TRIM39-205ENST00000396551 FSHBP01225 129 aa12.47□□□□□ -0.41
TRIM39-205ENST00000396551 FCER1GP30273 86 aa12.47□□□□□ -0.41
TRIM39-205ENST00000396551 RNASE4P34096 147 aaKnown RBP12.47□□□□□ -0.41
TRIM39-205ENST00000396551 RIPPLY3P57055 190 aa12.47□□□□□ -0.41
TRIM39-205ENST00000396551 ODF1Q14990 250 aa12.47□□□□□ -0.41
TRIM39-205ENST00000396551 Q8N8P6 123 aa12.47□□□□□ -0.41
TRIM39-205ENST00000396551 DCANP1Q8TF63 244 aa12.47□□□□□ -0.41
TRIM39-205ENST00000396551 C18orf15Q96N68 181 aa12.47□□□□□ -0.41
TRIM39-205ENST00000396551 MPV17L2Q567V2 206 aa12.46□□□□□ -0.41
TRIM39-205ENST00000396551 Q6ZVH6 145 aa12.46□□□□□ -0.41
TRIM39-205ENST00000396551 IGHV4-31P0DP07 118 aa12.46□□□□□ -0.42
TRIM39-205ENST00000396551 COX8AP10176 69 aa12.46□□□□□ -0.42
TRIM39-205ENST00000396551 LRRK2Q5S007 2527 aa12.45□□□□□ -0.42
TRIM39-205ENST00000396551 TMEM158Q8WZ71 300 aa12.45□□□□□ -0.42
TRIM39-205ENST00000396551 DKK2Q9UBU2 259 aa12.45□□□□□ -0.42
TRIM39-205ENST00000396551 TMEM89A2RUT3 159 aa12.44□□□□□ -0.42
TRIM39-205ENST00000396551 GNRH2O43555 120 aa12.44□□□□□ -0.42
TRIM39-205ENST00000396551 C2orf91Q6ZV80 131 aa12.44□□□□□ -0.42
TRIM39-205ENST00000396551 DEFB125Q8N687 156 aa12.44□□□□□ -0.42
TRIM39-205ENST00000396551 VPREB3Q9UKI3 123 aa12.44□□□□□ -0.42
TRIM39-205ENST00000396551 M0R381 172 aa12.44□□□□□ -0.42
TRIM39-205ENST00000396551 ASIPP42127 132 aa12.44□□□□□ -0.42
TRIM39-205ENST00000396551 DPF1Q92782 380 aa12.44□□□□□ -0.42
TRIM39-205ENST00000396551 TRBV7-9A0A0J9YWB2 115 aa12.43□□□□□ -0.42
TRIM39-205ENST00000396551 FGF6P10767 208 aa12.43□□□□□ -0.42
TRIM39-205ENST00000396551 NUDT3O95989 172 aa12.43□□□□□ -0.42
TRIM39-205ENST00000396551 Q6YL49 198 aa12.43□□□□□ -0.42
TRIM39-205ENST00000396551 RNASE3P12724 160 aaKnown RBP12.43□□□□□ -0.42
TRIM39-205ENST00000396551 S100A4P26447 101 aaKnown RBP12.43□□□□□ -0.42
TRIM39-205ENST00000396551 ZNF702PQ9H963 129 aa12.43□□□□□ -0.42
TRIM39-205ENST00000396551 CENPEQ02224 2701 aa12.42□□□□□ -0.42
TRIM39-205ENST00000396551 CD5LO43866 347 aa12.42□□□□□ -0.42
TRIM39-205ENST00000396551 BVES-AS1Q5T3Y7 98 aa12.42□□□□□ -0.42
TRIM39-205ENST00000396551 KLLNB2CW77 178 aa12.42□□□□□ -0.42
TRIM39-205ENST00000396551 TCTAP57738 103 aa12.42□□□□□ -0.42
TRIM39-205ENST00000396551 MUC4Q99102 2169 aa12.42□□□□□ -0.42
TRIM39-205ENST00000396551 MRAP2Q96G30 205 aa12.41□□□□□ -0.42
TRIM39-205ENST00000396551 DOPEY2Q9Y3R5 2298 aa12.41□□□□□ -0.42
TRIM39-205ENST00000396551 MED14OSP0DP75 135 aa12.41□□□□□ -0.42
TRIM39-205ENST00000396551 ID1P41134 155 aa12.41□□□□□ -0.42
TRIM39-205ENST00000396551 OR1N2Q8NGR9 330 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms