RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 TMSB15BA0A087X1C1 80 aa9.35□□□□□ -0.91
TRIM39-204ENST00000396548 M0R2Z0 102 aa9.35□□□□□ -0.91
TRIM39-204ENST00000396548 IGKV3-20P01619 116 aa9.35□□□□□ -0.91
TRIM39-204ENST00000396548 ORM1P02763 201 aa9.35□□□□□ -0.91
TRIM39-204ENST00000396548 CD7P09564 240 aa9.35□□□□□ -0.91
TRIM39-204ENST00000396548 CMC4P56277 68 aaPredicted RBP9.35□□□□□ -0.91
TRIM39-204ENST00000396548 TRPT1Q86TN4 253 aaKnown RBP9.35□□□□□ -0.91
TRIM39-204ENST00000396548 ZFP82Q8N141 532 aa9.35□□□□□ -0.91
TRIM39-204ENST00000396548 J3KRW8 73 aa9.35□□□□□ -0.91
TRIM39-204ENST00000396548 RBMY1A1P0DJD3 496 aaKnown RBP9.35□□□□□ -0.91
TRIM39-204ENST00000396548 RBMY1CP0DJD4 496 aa9.35□□□□□ -0.91
TRIM39-204ENST00000396548 RBMY1FQ15415 496 aaKnown RBP9.35□□□□□ -0.91
TRIM39-204ENST00000396548 MRPL54Q6P161 138 aaKnown RBP9.35□□□□□ -0.91
TRIM39-204ENST00000396548 FRZBQ92765 325 aa9.35□□□□□ -0.91
TRIM39-204ENST00000396548 OR11H12B2RN74 326 aa9.34□□□□□ -0.91
TRIM39-204ENST00000396548 ARMS2P0C7Q2 107 aa9.34□□□□□ -0.91
TRIM39-204ENST00000396548 SPINK13Q1W4C9 94 aa9.34□□□□□ -0.91
TRIM39-204ENST00000396548 LYZL1Q6UWQ5 148 aa9.34□□□□□ -0.91
TRIM39-204ENST00000396548 XKRY2A2RUG3 117 aa9.34□□□□□ -0.91
TRIM39-204ENST00000396548 C1orf196B1AJZ1 125 aa9.34□□□□□ -0.91
TRIM39-204ENST00000396548 TDRG1Q3Y452 100 aa9.34□□□□□ -0.91
TRIM39-204ENST00000396548 SHISA2Q6UWI4 295 aa9.34□□□□□ -0.91
TRIM39-204ENST00000396548 TRAV12-2A0A075B6T6 113 aa9.34□□□□□ -0.91
TRIM39-204ENST00000396548 GRIFINA4D1Z8 144 aa9.34□□□□□ -0.91
TRIM39-204ENST00000396548 SNAI2O43623 268 aa9.34□□□□□ -0.91
TRIM39-204ENST00000396548 TSPOP30536 169 aa9.34□□□□□ -0.91
TRIM39-204ENST00000396548 S100A12P80511 92 aa9.34□□□□□ -0.91
TRIM39-204ENST00000396548 ANXA2RQ3ZCQ2 193 aa9.34□□□□□ -0.91
TRIM39-204ENST00000396548 TMEM158Q8WZ71 300 aa9.34□□□□□ -0.91
TRIM39-204ENST00000396548 COX19Q49B96 90 aa9.33□□□□□ -0.92
TRIM39-204ENST00000396548 SCRT2Q9NQ03 307 aa9.33□□□□□ -0.92
TRIM39-204ENST00000396548 SORL1Q92673 2214 aa9.33□□□□□ -0.92
TRIM39-204ENST00000396548 HIST1H2BKO60814 126 aa9.33□□□□□ -0.92
TRIM39-204ENST00000396548 HIST1H2BJP06899 126 aa9.33□□□□□ -0.92
TRIM39-204ENST00000396548 HIST1H2BOP23527 126 aa9.33□□□□□ -0.92
TRIM39-204ENST00000396548 HIST1H2BBP33778 126 aa9.33□□□□□ -0.92
TRIM39-204ENST00000396548 HIST1H2BDP58876 126 aa9.33□□□□□ -0.92
TRIM39-204ENST00000396548 HIST1H2BCP62807 126 aa9.33□□□□□ -0.92
TRIM39-204ENST00000396548 FABP9Q0Z7S8 132 aa9.33□□□□□ -0.92
TRIM39-204ENST00000396548 HIST2H2BEQ16778 126 aa9.33□□□□□ -0.92
TRIM39-204ENST00000396548 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.33□□□□□ -0.92
TRIM39-204ENST00000396548 FER1L6-AS1Q8NA97 138 aa9.33□□□□□ -0.92
TRIM39-204ENST00000396548 HIST1H2BHQ93079 126 aa9.33□□□□□ -0.92
TRIM39-204ENST00000396548 HIST1H2BNQ99877 126 aa9.33□□□□□ -0.92
TRIM39-204ENST00000396548 HIST1H2BMQ99879 126 aa9.33□□□□□ -0.92
TRIM39-204ENST00000396548 TRAV12-3A0A0B4J271 114 aa9.32□□□□□ -0.92
TRIM39-204ENST00000396548 A0A1B0GUT8 65 aa9.32□□□□□ -0.92
TRIM39-204ENST00000396548 HBBP68871 147 aa9.32□□□□□ -0.92
TRIM39-204ENST00000396548 WDR73Q6P4I2 378 aa9.32□□□□□ -0.92
TRIM39-204ENST00000396548 TRAPPC1Q9Y5R8 145 aa9.32□□□□□ -0.92
TRIM39-204ENST00000396548 TRGC1P0CF51 173 aa9.32□□□□□ -0.92
TRIM39-204ENST00000396548 MCRIP2Q9BUT9 160 aaKnown RBP9.32□□□□□ -0.92
TRIM39-204ENST00000396548 WFDC10AQ9H1F0 79 aa9.32□□□□□ -0.92
TRIM39-204ENST00000396548 IGHV4-4A0A075B6R2 117 aa9.32□□□□□ -0.92
TRIM39-204ENST00000396548 SNURFLB1AK76 121 aa9.32□□□□□ -0.92
TRIM39-204ENST00000396548 GIG44P09565 113 aaPredicted RBP9.32□□□□□ -0.92
TRIM39-204ENST00000396548 OR5AL1P0C617 328 aa9.32□□□□□ -0.92
TRIM39-204ENST00000396548 ZNF493Q6ZR52 646 aa9.32□□□□□ -0.92
TRIM39-204ENST00000396548 MRPL18Q9H0U6 180 aaKnown RBP9.32□□□□□ -0.92
TRIM39-204ENST00000396548 MT-ND6P03923 174 aa9.31□□□□□ -0.92
TRIM39-204ENST00000396548 MED14OSP0DP75 135 aa9.31□□□□□ -0.92
TRIM39-204ENST00000396548 RNASE3P12724 160 aaKnown RBP9.31□□□□□ -0.92
TRIM39-204ENST00000396548 FXYD7P58549 80 aa9.31□□□□□ -0.92
TRIM39-204ENST00000396548 RAB5BP61020 215 aa9.31□□□□□ -0.92
TRIM39-204ENST00000396548 C3orf56Q8N813 242 aa9.31□□□□□ -0.92
TRIM39-204ENST00000396548 F2Z2F3 143 aa9.31□□□□□ -0.92
TRIM39-204ENST00000396548 GNRH2O43555 120 aa9.31□□□□□ -0.92
TRIM39-204ENST00000396548 SLAQ13239 276 aa9.31□□□□□ -0.92
TRIM39-204ENST00000396548 LINC00467Q9BRT7 94 aa9.31□□□□□ -0.92
TRIM39-204ENST00000396548 A0A1B0GW15 77 aa9.3□□□□□ -0.92
TRIM39-204ENST00000396548 IGLL1P15814 213 aa9.3□□□□□ -0.92
TRIM39-204ENST00000396548 MUC21Q5SSG8 566 aa9.3□□□□□ -0.92
TRIM39-204ENST00000396548 C12orf54Q6X4T0 127 aa9.3□□□□□ -0.92
TRIM39-204ENST00000396548 NIT2Q9NQR4 276 aa9.3□□□□□ -0.92
TRIM39-204ENST00000396548 HLA-DQA1P01909 254 aa9.3□□□□□ -0.92
TRIM39-204ENST00000396548 TP53TG3Q9ULZ0 132 aa9.3□□□□□ -0.92
TRIM39-204ENST00000396548 RIGQ13278 110 aa9.3□□□□□ -0.92
TRIM39-204ENST00000396548 STHQ8IWL8 128 aa9.3□□□□□ -0.92
TRIM39-204ENST00000396548 GSN-AS1Q9NRJ2 163 aa9.3□□□□□ -0.92
TRIM39-204ENST00000396548 PKD1L1Q8TDX9 2849 aa9.29□□□□□ -0.92
TRIM39-204ENST00000396548 Q8N1Y9 231 aa9.29□□□□□ -0.92
TRIM39-204ENST00000396548 NAGKQ9UJ70 344 aa9.29□□□□□ -0.92
TRIM39-204ENST00000396548 NTF3P20783 257 aa9.29□□□□□ -0.92
TRIM39-204ENST00000396548 CAMPP49913 170 aa9.29□□□□□ -0.92
TRIM39-204ENST00000396548 DMRTA1Q5VZB9 504 aa9.29□□□□□ -0.92
TRIM39-204ENST00000396548 C20orf144Q9BQM9 153 aa9.29□□□□□ -0.92
TRIM39-204ENST00000396548 IGHV3-16A0A0C4DH30 117 aa9.28□□□□□ -0.92
TRIM39-204ENST00000396548 NXPH4O95158 308 aa9.28□□□□□ -0.92
TRIM39-204ENST00000396548 OR10AG1Q8NH19 301 aa9.28□□□□□ -0.92
TRIM39-204ENST00000396548 KCNS1Q96KK3 526 aa9.28□□□□□ -0.92
TRIM39-204ENST00000396548 TPPP3Q9BW30 176 aa9.28□□□□□ -0.92
TRIM39-204ENST00000396548 MSRB1Q9NZV6 116 aa9.28□□□□□ -0.92
TRIM39-204ENST00000396548 IGHV1OR15-1A0A075B7D0 117 aa9.28□□□□□ -0.92
TRIM39-204ENST00000396548 MUC21A0A0G2JKD1 596 aa9.28□□□□□ -0.92
TRIM39-204ENST00000396548 MUC21A0A140T8X8 626 aa9.28□□□□□ -0.92
TRIM39-204ENST00000396548 FAM159AQ6UWV7 190 aa9.28□□□□□ -0.92
TRIM39-204ENST00000396548 C9orf85Q96MD7 179 aa9.28□□□□□ -0.92
TRIM39-204ENST00000396548 C5orf52A6NGY3 159 aa9.28□□□□□ -0.92
TRIM39-204ENST00000396548 AMBPP02760 352 aa9.28□□□□□ -0.92
TRIM39-204ENST00000396548 ASIPP42127 132 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms