RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 C18orf15Q96N68 181 aa12.55□□□□□ -0.4
TNFSF13-204ENST00000396542 MDFICQ9P1T7 246 aa12.55□□□□□ -0.4
TNFSF13-204ENST00000396542 C11orf21Q9P2W6 132 aa12.55□□□□□ -0.4
TNFSF13-204ENST00000396542 NAGKQ9UJ70 344 aa12.55□□□□□ -0.4
TNFSF13-204ENST00000396542 SCO2A0A1W2PP80 73 aa12.54□□□□□ -0.4
TNFSF13-204ENST00000396542 GAGE12BA1L429 117 aa12.54□□□□□ -0.4
TNFSF13-204ENST00000396542 GAGE7O76087 117 aa12.54□□□□□ -0.4
TNFSF13-204ENST00000396542 LTAP01374 205 aa12.54□□□□□ -0.4
TNFSF13-204ENST00000396542 GAGE12FP0CL80 117 aa12.54□□□□□ -0.4
TNFSF13-204ENST00000396542 GAGE12GP0CL81 117 aa12.54□□□□□ -0.4
TNFSF13-204ENST00000396542 GAGE12IP0CL82 117 aa12.54□□□□□ -0.4
TNFSF13-204ENST00000396542 HTN3P15516 51 aa12.54□□□□□ -0.4
TNFSF13-204ENST00000396542 AKR1C3P42330 323 aa12.54□□□□□ -0.4
TNFSF13-204ENST00000396542 TMEM183AQ8IXX5 376 aa12.54□□□□□ -0.4
TNFSF13-204ENST00000396542 KCNS1Q96KK3 526 aa12.54□□□□□ -0.4
TNFSF13-204ENST00000396542 TXNDC17Q9BRA2 123 aa12.54□□□□□ -0.4
TNFSF13-204ENST00000396542 TYMSP04818 313 aa12.53□□□□□ -0.4
TNFSF13-204ENST00000396542 S100A9P06702 114 aaKnown RBP12.53□□□□□ -0.4
TNFSF13-204ENST00000396542 LGALS9BQ3B8N2 356 aa12.53□□□□□ -0.4
TNFSF13-204ENST00000396542 C11orf52Q96A22 123 aa12.53□□□□□ -0.4
TNFSF13-204ENST00000396542 SDF2L1Q9HCN8 221 aa12.53□□□□□ -0.4
TNFSF13-204ENST00000396542 HYDINQ4G0P3 5121 aa12.52□□□□□ -0.41
TNFSF13-204ENST00000396542 IGHV3-16A0A0C4DH30 117 aa12.52□□□□□ -0.41
TNFSF13-204ENST00000396542 GNRH2O43555 120 aa12.52□□□□□ -0.41
TNFSF13-204ENST00000396542 LYPD6BQ8NI32 183 aa12.52□□□□□ -0.41
TNFSF13-204ENST00000396542 ZC2HC1AQ96GY0 325 aa12.52□□□□□ -0.41
TNFSF13-204ENST00000396542 NDUFAF3Q9BU61 184 aa12.52□□□□□ -0.41
TNFSF13-204ENST00000396542 TRGV1A0A0A0MS02 117 aa12.51□□□□□ -0.41
TNFSF13-204ENST00000396542 IFNA1P01562 189 aa12.51□□□□□ -0.41
TNFSF13-204ENST00000396542 BCL2P10415 239 aa12.51□□□□□ -0.41
TNFSF13-204ENST00000396542 CRIP1P50238 77 aa12.51□□□□□ -0.41
TNFSF13-204ENST00000396542 BLOC1S1P78537 153 aa12.51□□□□□ -0.41
TNFSF13-204ENST00000396542 MEF2BQ02080 365 aaPredicted RBP12.51□□□□□ -0.41
TNFSF13-204ENST00000396542 LGALS9CQ6DKI2 356 aa12.51□□□□□ -0.41
TNFSF13-204ENST00000396542 SPXQ9BT56 116 aa12.51□□□□□ -0.41
TNFSF13-204ENST00000396542 VPS13DQ5THJ4 4388 aa12.5□□□□□ -0.41
TNFSF13-204ENST00000396542 FABP5P3A8MUU1 101 aa12.5□□□□□ -0.41
TNFSF13-204ENST00000396542 F5H768 121 aa12.5□□□□□ -0.41
TNFSF13-204ENST00000396542 TMEM88Q6PEY1 159 aa12.5□□□□□ -0.41
TNFSF13-204ENST00000396542 MRPL16Q9NX20 251 aaKnown RBP12.5□□□□□ -0.41
TNFSF13-204ENST00000396542 LY6G6CO95867 125 aa12.49□□□□□ -0.41
TNFSF13-204ENST00000396542 TAGLN2P37802 199 aaKnown RBP12.49□□□□□ -0.41
TNFSF13-204ENST00000396542 RASL10AQ92737 203 aa12.49□□□□□ -0.41
TNFSF13-204ENST00000396542 MLST8Q9BVC4 326 aa12.49□□□□□ -0.41
TNFSF13-204ENST00000396542 VAX2Q9UIW0 290 aa12.49□□□□□ -0.41
TNFSF13-204ENST00000396542 TRGV2A0A075B6R0 118 aa12.48□□□□□ -0.41
TNFSF13-204ENST00000396542 IGKV3D-20A0A0C4DH25 116 aa12.48□□□□□ -0.41
TNFSF13-204ENST00000396542 PDE6DO43924 150 aa12.48□□□□□ -0.41
TNFSF13-204ENST00000396542 HOXA5P20719 270 aa12.48□□□□□ -0.41
TNFSF13-204ENST00000396542 ZNF674Q2M3X9 581 aa12.48□□□□□ -0.41
TNFSF13-204ENST00000396542 FAM162BQ5T6X4 162 aa12.48□□□□□ -0.41
TNFSF13-204ENST00000396542 SH2D1AO60880 128 aa12.47□□□□□ -0.41
TNFSF13-204ENST00000396542 RPL35P42766 123 aaKnown RBP12.47□□□□□ -0.41
TNFSF13-204ENST00000396542 IFITM2Q01629 132 aa12.47□□□□□ -0.41
TNFSF13-204ENST00000396542 DERL1Q9BUN8 251 aa12.47□□□□□ -0.41
TNFSF13-204ENST00000396542 MUC4Q99102 2169 aa12.46□□□□□ -0.41
TNFSF13-204ENST00000396542 M0R2P5 195 aa12.46□□□□□ -0.41
TNFSF13-204ENST00000396542 BAGE2Q86Y30 109 aa12.46□□□□□ -0.41
TNFSF13-204ENST00000396542 C15orf53Q8NAA6 179 aa12.46□□□□□ -0.41
TNFSF13-204ENST00000396542 NHLRC2Q8NBF2 726 aa12.46□□□□□ -0.41
TNFSF13-204ENST00000396542 C9orf85Q96MD7 179 aa12.46□□□□□ -0.41
TNFSF13-204ENST00000396542 RNASE3P12724 160 aaKnown RBP12.45□□□□□ -0.42
TNFSF13-204ENST00000396542 ZNF575Q86XF7 245 aa12.45□□□□□ -0.42
TNFSF13-204ENST00000396542 KRBOX1C9JBD0 128 aa12.44□□□□□ -0.42
TNFSF13-204ENST00000396542 ORM1P02763 201 aa12.44□□□□□ -0.42
TNFSF13-204ENST00000396542 OR5I1Q13606 314 aa12.44□□□□□ -0.42
TNFSF13-204ENST00000396542 LINC01559Q495D7 138 aa12.44□□□□□ -0.42
TNFSF13-204ENST00000396542 DNLZQ5SXM8 178 aa12.44□□□□□ -0.42
TNFSF13-204ENST00000396542 TEX261Q6UWH6 196 aa12.44□□□□□ -0.42
TNFSF13-204ENST00000396542 PTH2Q96A98 100 aa12.44□□□□□ -0.42
TNFSF13-204ENST00000396542 TRAV26-1A0A087WT03 109 aa12.43□□□□□ -0.42
TNFSF13-204ENST00000396542 B4DEV8 164 aa12.43□□□□□ -0.42
TNFSF13-204ENST00000396542 H3BNG1 76 aa12.43□□□□□ -0.42
TNFSF13-204ENST00000396542 P0DMU3 169 aa12.43□□□□□ -0.42
TNFSF13-204ENST00000396542 FAM231AP0DMU4 169 aa12.43□□□□□ -0.42
TNFSF13-204ENST00000396542 FAM231CP0DMU5 169 aa12.43□□□□□ -0.42
TNFSF13-204ENST00000396542 CENPWQ5EE01 88 aa12.43□□□□□ -0.42
TNFSF13-204ENST00000396542 MED9Q9NWA0 146 aa12.43□□□□□ -0.42
TNFSF13-204ENST00000396542 RBFOX3A6NFN3 312 aa12.42□□□□□ -0.42
TNFSF13-204ENST00000396542 M0R036 132 aa12.42□□□□□ -0.42
TNFSF13-204ENST00000396542 IGLV2-8P01709 118 aa12.42□□□□□ -0.42
TNFSF13-204ENST00000396542 ZNF506Q5JVG8 444 aa12.42□□□□□ -0.42
TNFSF13-204ENST00000396542 POM121L12Q8N7R1 296 aa12.42□□□□□ -0.42
TNFSF13-204ENST00000396542 SMIM12Q96EX1 92 aa12.42□□□□□ -0.42
TNFSF13-204ENST00000396542 NACAE9PAV3 2078 aa12.41□□□□□ -0.42
TNFSF13-204ENST00000396542 TRBV20OR9-2A0A075B6H5 130 aa12.41□□□□□ -0.42
TNFSF13-204ENST00000396542 RAB19A4D1S5 217 aa12.41□□□□□ -0.42
TNFSF13-204ENST00000396542 IGHV3-53P01767 116 aa12.41□□□□□ -0.42
TNFSF13-204ENST00000396542 ASIPP42127 132 aa12.41□□□□□ -0.42
TNFSF13-204ENST00000396542 FHL2Q14192 279 aa12.41□□□□□ -0.42
TNFSF13-204ENST00000396542 ZNF876PQ49A33 203 aa12.41□□□□□ -0.42
TNFSF13-204ENST00000396542 VSIG2Q96IQ7 327 aa12.41□□□□□ -0.42
TNFSF13-204ENST00000396542 ZNF479Q96JC4 524 aa12.41□□□□□ -0.42
TNFSF13-204ENST00000396542 IL36BQ9NZH7 164 aa12.41□□□□□ -0.42
TNFSF13-204ENST00000396542 TRAV4A0A0B4J268 109 aa12.4□□□□□ -0.42
TNFSF13-204ENST00000396542 GNG4P50150 75 aa12.4□□□□□ -0.42
TNFSF13-204ENST00000396542 KMT2AQ03164 3969 aa12.4□□□□□ -0.42
TNFSF13-204ENST00000396542 A0A0J9YY99 117 aa12.39□□□□□ -0.43
TNFSF13-204ENST00000396542 PGPEP1LA6NFU8 196 aa12.39□□□□□ -0.43
TNFSF13-204ENST00000396542 TMEM250H0YL14 139 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms