RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 SAMD5Q5TGI4 173 aa11.96□□□□□ -0.5
HOXA3-202ENST00000396352 GPHB5Q86YW7 130 aa11.96□□□□□ -0.5
HOXA3-202ENST00000396352 UBTD1Q9HAC8 227 aa11.96□□□□□ -0.5
HOXA3-202ENST00000396352 A0A087WX48 190 aa11.95□□□□□ -0.5
HOXA3-202ENST00000396352 MAPKAPK5-AS1Q8N8E1 139 aa11.95□□□□□ -0.5
HOXA3-202ENST00000396352 TM2D2Q9BX73 214 aa11.95□□□□□ -0.5
HOXA3-202ENST00000396352 MRAP2Q96G30 205 aa11.95□□□□□ -0.5
HOXA3-202ENST00000396352 TRAV41A0A0B4J266 112 aa11.94□□□□□ -0.5
HOXA3-202ENST00000396352 FABP2P12104 132 aa11.94□□□□□ -0.5
HOXA3-202ENST00000396352 SRSF1Q07955 248 aaKnown RBP eCLIP11.94□□□□□ -0.5
HOXA3-202ENST00000396352 C9orf139Q6ZV77 190 aa11.94□□□□□ -0.5
HOXA3-202ENST00000396352 CEND1Q8N111 149 aa11.94□□□□□ -0.5
HOXA3-202ENST00000396352 LINC00527Q9UJ94 153 aa11.94□□□□□ -0.5
HOXA3-202ENST00000396352 LENEPQ9Y5L5 61 aa11.94□□□□□ -0.5
HOXA3-202ENST00000396352 ATP6V0BQ99437 205 aa11.94□□□□□ -0.5
HOXA3-202ENST00000396352 SMIM2Q9BVW6 85 aa11.94□□□□□ -0.5
HOXA3-202ENST00000396352 FAM223BA6NKX1 122 aa11.94□□□□□ -0.5
HOXA3-202ENST00000396352 G3V4G9 280 aa11.94□□□□□ -0.5
HOXA3-202ENST00000396352 FAM223AQ8IWN6 122 aa11.94□□□□□ -0.5
HOXA3-202ENST00000396352 ZFAND2AQ8N6M9 145 aa11.94□□□□□ -0.5
HOXA3-202ENST00000396352 CSTL1Q9H114 145 aa11.94□□□□□ -0.5
HOXA3-202ENST00000396352 UNQ9165/PRO28630Q6UXU0 137 aa11.93□□□□□ -0.5
HOXA3-202ENST00000396352 UCNP55089 124 aa11.93□□□□□ -0.5
HOXA3-202ENST00000396352 SPTBN1Q01082 2364 aaKnown RBP11.93□□□□□ -0.5
HOXA3-202ENST00000396352 ABCA2Q9BZC7 2435 aa11.93□□□□□ -0.5
HOXA3-202ENST00000396352 SOCS3O14543 225 aa11.92□□□□□ -0.5
HOXA3-202ENST00000396352 TRBV12-3P01733 135 aa11.92□□□□□ -0.5
HOXA3-202ENST00000396352 CRIP2P52943 208 aaPredicted RBP11.92□□□□□ -0.5
HOXA3-202ENST00000396352 MOB4Q9Y3A3 225 aa11.92□□□□□ -0.5
HOXA3-202ENST00000396352 J3KRW8 73 aa11.92□□□□□ -0.5
HOXA3-202ENST00000396352 SPRY2O43597 315 aa11.92□□□□□ -0.5
HOXA3-202ENST00000396352 PLNP26678 52 aa11.92□□□□□ -0.5
HOXA3-202ENST00000396352 ARL3P36405 182 aa11.92□□□□□ -0.5
HOXA3-202ENST00000396352 K7EMI3 77 aa11.92□□□□□ -0.5
HOXA3-202ENST00000396352 RASL10AQ92737 203 aa11.92□□□□□ -0.5
HOXA3-202ENST00000396352 NHP2Q9NX24 153 aaKnown RBP11.91□□□□□ -0.5
HOXA3-202ENST00000396352 TRAV12-1A0A0B4J245 112 aa11.91□□□□□ -0.5
HOXA3-202ENST00000396352 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.91□□□□□ -0.5
HOXA3-202ENST00000396352 DEFB1P60022 68 aa11.91□□□□□ -0.5
HOXA3-202ENST00000396352 HIVEP3Q5T1R4 2406 aa11.91□□□□□ -0.5
HOXA3-202ENST00000396352 RNF223E7ERA6 249 aa11.91□□□□□ -0.5
HOXA3-202ENST00000396352 LINC00477Q96M19 166 aa11.91□□□□□ -0.5
HOXA3-202ENST00000396352 IGHV3OR16-10A0A075B7F0 116 aa11.9□□□□□ -0.5
HOXA3-202ENST00000396352 M0R381 172 aa11.9□□□□□ -0.5
HOXA3-202ENST00000396352 COL6A6A6NMZ7 2263 aa11.9□□□□□ -0.5
HOXA3-202ENST00000396352 TOMM6Q96B49 74 aa11.9□□□□□ -0.5
HOXA3-202ENST00000396352 F8VRH5 84 aa11.89□□□□□ -0.51
HOXA3-202ENST00000396352 RIPPLY3P57055 190 aa11.89□□□□□ -0.51
HOXA3-202ENST00000396352 SUMO2P61956 95 aaKnown RBP11.89□□□□□ -0.51
HOXA3-202ENST00000396352 RPL39LQ96EH5 51 aaKnown RBP11.89□□□□□ -0.51
HOXA3-202ENST00000396352 FAM19A4Q96LR4 140 aa11.89□□□□□ -0.51
HOXA3-202ENST00000396352 H7C1H1 209 aa11.89□□□□□ -0.51
HOXA3-202ENST00000396352 TRAV21A0A0B4J279 112 aa11.89□□□□□ -0.51
HOXA3-202ENST00000396352 TAL2Q16559 108 aa11.89□□□□□ -0.51
HOXA3-202ENST00000396352 ORMDL2Q53FV1 153 aa11.89□□□□□ -0.51
HOXA3-202ENST00000396352 AGRNO00468 2067 aa11.88□□□□□ -0.51
HOXA3-202ENST00000396352 NDUFA4O00483 81 aa11.88□□□□□ -0.51
HOXA3-202ENST00000396352 SLC25A16P16260 332 aa11.88□□□□□ -0.51
HOXA3-202ENST00000396352 OR10J6PQ8NGY7 276 aa11.88□□□□□ -0.51
HOXA3-202ENST00000396352 C20orf78Q9BR46 151 aa11.88□□□□□ -0.51
HOXA3-202ENST00000396352 DPH3P1Q9H4G8 78 aa11.88□□□□□ -0.51
HOXA3-202ENST00000396352 E9PLD3 99 aa11.88□□□□□ -0.51
HOXA3-202ENST00000396352 OVOL1O14753 267 aa11.88□□□□□ -0.51
HOXA3-202ENST00000396352 C14orf178Q8N769 122 aaPredicted RBP11.88□□□□□ -0.51
HOXA3-202ENST00000396352 NEXN-AS1Q8NBZ9 246 aa11.88□□□□□ -0.51
HOXA3-202ENST00000396352 KLK15Q9H2R5 256 aa11.88□□□□□ -0.51
HOXA3-202ENST00000396352 ANXA2RQ3ZCQ2 193 aa11.87□□□□□ -0.51
HOXA3-202ENST00000396352 ASIPP42127 132 aa11.87□□□□□ -0.51
HOXA3-202ENST00000396352 BRD3OSQ6XYD6 125 aa11.87□□□□□ -0.51
HOXA3-202ENST00000396352 SCGB3A1Q96QR1 104 aa11.87□□□□□ -0.51
HOXA3-202ENST00000396352 CHTOPQ9Y3Y2 248 aaKnown RBP11.87□□□□□ -0.51
HOXA3-202ENST00000396352 IGHV1-69DA0A0B4J2H0 117 aa11.86□□□□□ -0.51
HOXA3-202ENST00000396352 IGLL5B9A064 214 aa11.86□□□□□ -0.51
HOXA3-202ENST00000396352 IGHV1-69P01742 117 aa11.86□□□□□ -0.51
HOXA3-202ENST00000396352 APRG1Q8IVJ8 170 aa11.86□□□□□ -0.51
HOXA3-202ENST00000396352 AKAP6Q13023 2319 aa11.86□□□□□ -0.51
HOXA3-202ENST00000396352 TRBV7-3A0A075B6L6 115 aa11.86□□□□□ -0.51
HOXA3-202ENST00000396352 F6UB75 175 aa11.86□□□□□ -0.51
HOXA3-202ENST00000396352 S100A4P26447 101 aaKnown RBP11.86□□□□□ -0.51
HOXA3-202ENST00000396352 PHLDA3Q9Y5J5 127 aa11.86□□□□□ -0.51
HOXA3-202ENST00000396352 MED14OSP0DP75 135 aa11.85□□□□□ -0.51
HOXA3-202ENST00000396352 RNASE3P12724 160 aaKnown RBP11.85□□□□□ -0.51
HOXA3-202ENST00000396352 C12orf74Q32Q52 190 aa11.85□□□□□ -0.51
HOXA3-202ENST00000396352 RNASE4P34096 147 aaKnown RBP11.85□□□□□ -0.51
HOXA3-202ENST00000396352 BAALCQ8WXS3 180 aa11.85□□□□□ -0.51
HOXA3-202ENST00000396352 MYMXA0A1B0GTQ4 84 aa11.84□□□□□ -0.51
HOXA3-202ENST00000396352 C19orf84I3L1E1 186 aa11.84□□□□□ -0.51
HOXA3-202ENST00000396352 GNRH2O43555 120 aa11.84□□□□□ -0.51
HOXA3-202ENST00000396352 IGHV4-39P01824 125 aa11.84□□□□□ -0.51
HOXA3-202ENST00000396352 HIST1H4GQ99525 98 aa11.84□□□□□ -0.51
HOXA3-202ENST00000396352 SPOCK3Q9BQ16 436 aa11.84□□□□□ -0.51
HOXA3-202ENST00000396352 MUC4Q99102 2169 aa11.84□□□□□ -0.51
HOXA3-202ENST00000396352 LINC01619G3V211 115 aa11.84□□□□□ -0.51
HOXA3-202ENST00000396352 C2orf66Q6UXQ4 117 aa11.84□□□□□ -0.51
HOXA3-202ENST00000396352 IGHV3-11P01762 117 aa11.84□□□□□ -0.51
HOXA3-202ENST00000396352 MGPP08493 103 aa11.84□□□□□ -0.51
HOXA3-202ENST00000396352 TEX48A0A1B0GUV7 120 aa11.83□□□□□ -0.52
HOXA3-202ENST00000396352 OR11H12B2RN74 326 aa11.83□□□□□ -0.52
HOXA3-202ENST00000396352 BRI3O95415 125 aa11.83□□□□□ -0.52
HOXA3-202ENST00000396352 FOXI2Q6ZQN5 318 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms