RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 CSMD2Q7Z408 3487 aa12.24□□□□□ -0.45
CCHCR1-202ENST00000396263 LRRK2Q5S007 2527 aa12.24□□□□□ -0.45
CCHCR1-202ENST00000396263 TNFRSF6BO95407 300 aa12.24□□□□□ -0.45
CCHCR1-202ENST00000396263 CRIP2P52943 208 aaPredicted RBP12.24□□□□□ -0.45
CCHCR1-202ENST00000396263 MOB4Q9Y3A3 225 aa12.24□□□□□ -0.45
CCHCR1-202ENST00000396263 KMT2BQ9UMN6 2715 aaPredicted RBP12.23□□□□□ -0.45
CCHCR1-202ENST00000396263 GAS8-AS1O95177 125 aa12.23□□□□□ -0.45
CCHCR1-202ENST00000396263 SAMD5Q5TGI4 173 aa12.23□□□□□ -0.45
CCHCR1-202ENST00000396263 PCP2Q8IVA1 136 aa12.23□□□□□ -0.45
CCHCR1-202ENST00000396263 ZFHX3Q15911 3703 aa12.23□□□□□ -0.45
CCHCR1-202ENST00000396263 FAM223BA6NKX1 122 aa12.23□□□□□ -0.45
CCHCR1-202ENST00000396263 FAM223AQ8IWN6 122 aa12.23□□□□□ -0.45
CCHCR1-202ENST00000396263 FAM208BQ5VWN6 2430 aa12.23□□□□□ -0.45
CCHCR1-202ENST00000396263 CHD6Q8TD26 2715 aa12.23□□□□□ -0.45
CCHCR1-202ENST00000396263 IGHV3-49A0A0A0MS15 119 aa12.22□□□□□ -0.45
CCHCR1-202ENST00000396263 TRAV41A0A0B4J266 112 aa12.22□□□□□ -0.45
CCHCR1-202ENST00000396263 FCER1GP30273 86 aa12.22□□□□□ -0.45
CCHCR1-202ENST00000396263 PPIFP30405 207 aaKnown RBP12.22□□□□□ -0.45
CCHCR1-202ENST00000396263 GAGE12HA6NDE8 117 aa12.22□□□□□ -0.45
CCHCR1-202ENST00000396263 TMEM219Q86XT9 240 aa12.22□□□□□ -0.45
CCHCR1-202ENST00000396263 OR9G4Q8NGQ1 327 aa12.22□□□□□ -0.45
CCHCR1-202ENST00000396263 IGHV7-4-1A0A0J9YVY3 117 aa12.21□□□□□ -0.45
CCHCR1-202ENST00000396263 SIVA1O15304 175 aa12.21□□□□□ -0.45
CCHCR1-202ENST00000396263 LEPP41159 167 aa12.21□□□□□ -0.45
CCHCR1-202ENST00000396263 CD300EQ496F6 205 aaPredicted RBP12.21□□□□□ -0.45
CCHCR1-202ENST00000396263 GLMPQ8WWB7 406 aa12.21□□□□□ -0.45
CCHCR1-202ENST00000396263 ABCA2Q9BZC7 2435 aa12.21□□□□□ -0.46
CCHCR1-202ENST00000396263 K7ERJ3 54 aa12.2□□□□□ -0.46
CCHCR1-202ENST00000396263 NMUP48645 174 aa12.2□□□□□ -0.46
CCHCR1-202ENST00000396263 PIFOQ8TCI5 191 aa12.2□□□□□ -0.46
CCHCR1-202ENST00000396263 IGLV2-18A0A075B6J9 118 aa12.2□□□□□ -0.46
CCHCR1-202ENST00000396263 IGHV4-4A0A075B6R2 117 aa12.2□□□□□ -0.46
CCHCR1-202ENST00000396263 EVI2AP22794 236 aa12.2□□□□□ -0.46
CCHCR1-202ENST00000396263 Q8N8P6 123 aa12.2□□□□□ -0.46
CCHCR1-202ENST00000396263 OR4X2Q8NGF9 303 aa12.2□□□□□ -0.46
CCHCR1-202ENST00000396263 IGHV4-39P01824 125 aa12.19□□□□□ -0.46
CCHCR1-202ENST00000396263 TRGV3P03979 118 aa12.19□□□□□ -0.46
CCHCR1-202ENST00000396263 GATA1P15976 413 aaPredicted RBP12.19□□□□□ -0.46
CCHCR1-202ENST00000396263 FXYD2P54710 66 aa12.19□□□□□ -0.46
CCHCR1-202ENST00000396263 PSMG4Q5JS54 123 aa12.19□□□□□ -0.46
CCHCR1-202ENST00000396263 C9orf139Q6ZV77 190 aa12.19□□□□□ -0.46
CCHCR1-202ENST00000396263 C16orf92Q96LL3 132 aa12.19□□□□□ -0.46
CCHCR1-202ENST00000396263 DKK2Q9UBU2 259 aa12.19□□□□□ -0.46
CCHCR1-202ENST00000396263 LENEPQ9Y5L5 61 aa12.19□□□□□ -0.46
CCHCR1-202ENST00000396263 CELSR1Q9NYQ6 3014 aa12.19□□□□□ -0.46
CCHCR1-202ENST00000396263 TRAV26-1A0A087WT03 109 aa12.19□□□□□ -0.46
CCHCR1-202ENST00000396263 IGHV1-69DA0A0B4J2H0 117 aa12.19□□□□□ -0.46
CCHCR1-202ENST00000396263 IGHV1-69P01742 117 aa12.19□□□□□ -0.46
CCHCR1-202ENST00000396263 SCGB2A2Q13296 93 aa12.19□□□□□ -0.46
CCHCR1-202ENST00000396263 WFDC3Q8IUB2 231 aa12.19□□□□□ -0.46
CCHCR1-202ENST00000396263 ZMAT4Q9H898 229 aa12.19□□□□□ -0.46
CCHCR1-202ENST00000396263 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.18□□□□□ -0.46
CCHCR1-202ENST00000396263 WFDC2Q14508 124 aa12.18□□□□□ -0.46
CCHCR1-202ENST00000396263 SPANXB1Q9NS25 103 aaPredicted RBP12.18□□□□□ -0.46
CCHCR1-202ENST00000396263 CENPEQ02224 2701 aa12.18□□□□□ -0.46
CCHCR1-202ENST00000396263 SPG11Q96JI7 2443 aa12.18□□□□□ -0.46
CCHCR1-202ENST00000396263 SMIM13P0DJ93 91 aa12.18□□□□□ -0.46
CCHCR1-202ENST00000396263 CKS1BP61024 79 aa12.18□□□□□ -0.46
CCHCR1-202ENST00000396263 ODF1Q14990 250 aa12.18□□□□□ -0.46
CCHCR1-202ENST00000396263 GCSHP23434 173 aa12.17□□□□□ -0.46
CCHCR1-202ENST00000396263 ARL3P36405 182 aa12.17□□□□□ -0.46
CCHCR1-202ENST00000396263 NRACQ8N912 160 aa12.17□□□□□ -0.46
CCHCR1-202ENST00000396263 LINC00527Q9UJ94 153 aa12.17□□□□□ -0.46
CCHCR1-202ENST00000396263 IGHV3OR16-10A0A075B7F0 116 aa12.17□□□□□ -0.46
CCHCR1-202ENST00000396263 IGF1P05019 195 aa12.17□□□□□ -0.46
CCHCR1-202ENST00000396263 SPATA25Q9BR10 227 aa12.17□□□□□ -0.46
CCHCR1-202ENST00000396263 TTTY13Q9BZ97 58 aa12.17□□□□□ -0.46
CCHCR1-202ENST00000396263 CELSR2Q9HCU4 2923 aa12.16□□□□□ -0.46
CCHCR1-202ENST00000396263 K7EMI3 77 aa12.16□□□□□ -0.46
CCHCR1-202ENST00000396263 BRI3O95415 125 aa12.16□□□□□ -0.46
CCHCR1-202ENST00000396263 FOXI2Q6ZQN5 318 aa12.16□□□□□ -0.46
CCHCR1-202ENST00000396263 TMEM158Q8WZ71 300 aa12.16□□□□□ -0.46
CCHCR1-202ENST00000396263 C20orf173Q96LM9 149 aa12.16□□□□□ -0.46
CCHCR1-202ENST00000396263 NDUFA4O00483 81 aa12.16□□□□□ -0.46
CCHCR1-202ENST00000396263 CRYBA4P53673 196 aa12.16□□□□□ -0.46
CCHCR1-202ENST00000396263 Q6ZQT7 251 aa12.16□□□□□ -0.46
CCHCR1-202ENST00000396263 SH2D6Q7Z4S9 175 aa12.16□□□□□ -0.46
CCHCR1-202ENST00000396263 CCL19Q99731 98 aa12.16□□□□□ -0.46
CCHCR1-202ENST00000396263 PRR9Q5T870 116 aa12.15□□□□□ -0.46
CCHCR1-202ENST00000396263 GPHB5Q86YW7 130 aa12.15□□□□□ -0.46
CCHCR1-202ENST00000396263 PHLDA1Q8WV24 401 aaPredicted RBP12.15□□□□□ -0.46
CCHCR1-202ENST00000396263 LINC00477Q96M19 166 aa12.15□□□□□ -0.46
CCHCR1-202ENST00000396263 HHLA3Q9XRX5 114 aa12.15□□□□□ -0.46
CCHCR1-202ENST00000396263 FBN2P35556 2912 aa12.15□□□□□ -0.46
CCHCR1-202ENST00000396263 TRAV40A0A0B4J280 105 aa12.15□□□□□ -0.46
CCHCR1-202ENST00000396263 ATP5LO75964 103 aa12.15□□□□□ -0.46
CCHCR1-202ENST00000396263 SPANXN1Q5VSR9 72 aa12.15□□□□□ -0.46
CCHCR1-202ENST00000396263 UNQ9165/PRO28630Q6UXU0 137 aa12.15□□□□□ -0.46
CCHCR1-202ENST00000396263 BRD3OSQ6XYD6 125 aa12.15□□□□□ -0.46
CCHCR1-202ENST00000396263 SPAG8Q99932 426 aaPredicted RBP12.15□□□□□ -0.46
CCHCR1-202ENST00000396263 UFC1Q9Y3C8 167 aa12.15□□□□□ -0.46
CCHCR1-202ENST00000396263 H3BUA1 57 aa12.14□□□□□ -0.47
CCHCR1-202ENST00000396263 SOCS3O14543 225 aa12.14□□□□□ -0.47
CCHCR1-202ENST00000396263 PRSS1P07477 247 aa12.14□□□□□ -0.47
CCHCR1-202ENST00000396263 PIMREGQ9BSJ6 248 aa12.14□□□□□ -0.47
CCHCR1-202ENST00000396263 TRBV12-3P01733 135 aa12.14□□□□□ -0.47
CCHCR1-202ENST00000396263 NRGNQ92686 78 aa12.14□□□□□ -0.47
CCHCR1-202ENST00000396263 IGKV2D-26A0A0A0MRZ7 120 aa12.13□□□□□ -0.47
CCHCR1-202ENST00000396263 IGHV4-61A0A0C4DH41 118 aa12.13□□□□□ -0.47
CCHCR1-202ENST00000396263 OVOL1O14753 267 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms