RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 JPT2Q9H910 190 aa7.56□□□□□ -1.2
CDRT1-204ENST00000395906 H7C1H1 209 aa7.55□□□□□ -1.2
CDRT1-204ENST00000395906 PRCDQ00LT1 54 aa7.55□□□□□ -1.2
CDRT1-204ENST00000395906 TMEM170BQ5T4T1 132 aa7.55□□□□□ -1.2
CDRT1-204ENST00000395906 ZNF256Q9Y2P7 627 aaPredicted RBP7.55□□□□□ -1.2
CDRT1-204ENST00000395906 ICE1Q9Y2F5 2266 aa7.55□□□□□ -1.2
CDRT1-204ENST00000395906 INS-IGF2F8WCM5 200 aa7.55□□□□□ -1.2
CDRT1-204ENST00000395906 RS1O15537 224 aa7.55□□□□□ -1.2
CDRT1-204ENST00000395906 PLAUP00749 431 aa7.55□□□□□ -1.2
CDRT1-204ENST00000395906 HOXB4P17483 251 aaPredicted RBP7.55□□□□□ -1.2
CDRT1-204ENST00000395906 Q8N8P6 123 aa7.55□□□□□ -1.2
CDRT1-204ENST00000395906 SPTBN1Q01082 2364 aaKnown RBP7.54□□□□□ -1.2
CDRT1-204ENST00000395906 POLEQ07864 2286 aa7.54□□□□□ -1.2
CDRT1-204ENST00000395906 TRAV17A0A0B4J275 112 aa7.54□□□□□ -1.2
CDRT1-204ENST00000395906 F8VRH5 84 aa7.54□□□□□ -1.2
CDRT1-204ENST00000395906 PSPNO60542 156 aa7.54□□□□□ -1.2
CDRT1-204ENST00000395906 C1orf43Q9BWL3 253 aa7.54□□□□□ -1.2
CDRT1-204ENST00000395906 DEFB127Q9H1M4 99 aa7.54□□□□□ -1.2
CDRT1-204ENST00000395906 OTORQ9NRC9 128 aa7.54□□□□□ -1.2
CDRT1-204ENST00000395906 TRAV12-1A0A0B4J245 112 aa7.54□□□□□ -1.2
CDRT1-204ENST00000395906 SS18L1O75177 396 aaPredicted RBP7.54□□□□□ -1.2
CDRT1-204ENST00000395906 OXTP01178 125 aa7.54□□□□□ -1.2
CDRT1-204ENST00000395906 RNASE2P10153 161 aaKnown RBP7.54□□□□□ -1.2
CDRT1-204ENST00000395906 DEFB121Q5J5C9 76 aa7.54□□□□□ -1.2
CDRT1-204ENST00000395906 GOLT1AQ6ZVE7 132 aa7.54□□□□□ -1.2
CDRT1-204ENST00000395906 PLEKHB2Q96CS7 222 aa7.54□□□□□ -1.2
CDRT1-204ENST00000395906 C2orf48Q96LS8 159 aa7.54□□□□□ -1.2
CDRT1-204ENST00000395906 TACC2O95359 2948 aa7.53□□□□□ -1.2
CDRT1-204ENST00000395906 AAED1Q7RTV5 226 aa7.53□□□□□ -1.2
CDRT1-204ENST00000395906 SRXN1Q9BYN0 137 aa7.53□□□□□ -1.2
CDRT1-204ENST00000395906 CRYBG3Q68DQ2 2970 aa7.53□□□□□ -1.2
CDRT1-204ENST00000395906 DCHS2Q6V1P9 2916 aa7.53□□□□□ -1.2
CDRT1-204ENST00000395906 SPINT2O43291 252 aa7.53□□□□□ -1.2
CDRT1-204ENST00000395906 IGHV3-9P01782 118 aa7.53□□□□□ -1.2
CDRT1-204ENST00000395906 Q71RC1 249 aaPredicted RBP7.53□□□□□ -1.2
CDRT1-204ENST00000395906 TTTY12Q9BZ98 90 aa7.53□□□□□ -1.2
CDRT1-204ENST00000395906 hADV29S1A0JD25 119 aa7.52□□□□□ -1.21
CDRT1-204ENST00000395906 K7ENP7 123 aa7.52□□□□□ -1.21
CDRT1-204ENST00000395906 GP9P14770 177 aa7.52□□□□□ -1.21
CDRT1-204ENST00000395906 RPL39P5Q59GN2 51 aa7.52□□□□□ -1.21
CDRT1-204ENST00000395906 FLNCQ14315 2725 aa7.52□□□□□ -1.21
CDRT1-204ENST00000395906 CADP27708 2225 aa7.52□□□□□ -1.21
CDRT1-204ENST00000395906 IGSF10Q6WRI0 2623 aa7.52□□□□□ -1.21
CDRT1-204ENST00000395906 CENPEQ02224 2701 aa7.52□□□□□ -1.21
CDRT1-204ENST00000395906 INTS1Q8N201 2190 aaKnown RBP7.52□□□□□ -1.21
CDRT1-204ENST00000395906 CXCL13O43927 109 aa7.52□□□□□ -1.21
CDRT1-204ENST00000395906 ACYP1P07311 99 aa7.52□□□□□ -1.21
CDRT1-204ENST00000395906 EDN2P20800 178 aa7.52□□□□□ -1.21
CDRT1-204ENST00000395906 B3GALT5-AS1P59052 145 aa7.52□□□□□ -1.21
CDRT1-204ENST00000395906 C2orf82Q6UX34 121 aa7.52□□□□□ -1.21
CDRT1-204ENST00000395906 TMEM75Q8N9X5 138 aa7.52□□□□□ -1.21
CDRT1-204ENST00000395906 PYGO1Q9Y3Y4 419 aa7.52□□□□□ -1.21
CDRT1-204ENST00000395906 UTP20O75691 2785 aaKnown RBP7.51□□□□□ -1.21
CDRT1-204ENST00000395906 IGHV3-13P01766 116 aa7.51□□□□□ -1.21
CDRT1-204ENST00000395906 IGHV3-30P01768 117 aa7.51□□□□□ -1.21
CDRT1-204ENST00000395906 IGHV3-30-5P0DP03 117 aa7.51□□□□□ -1.21
CDRT1-204ENST00000395906 COX6B1P14854 86 aa7.51□□□□□ -1.21
CDRT1-204ENST00000395906 CRIP1P50238 77 aa7.51□□□□□ -1.21
CDRT1-204ENST00000395906 ZNF71Q9NQZ8 489 aaPredicted RBP7.51□□□□□ -1.21
CDRT1-204ENST00000395906 H3BT86 120 aa7.51□□□□□ -1.21
CDRT1-204ENST00000395906 IGHV3-33P01772 117 aa7.51□□□□□ -1.21
CDRT1-204ENST00000395906 SLC25A16P16260 332 aa7.51□□□□□ -1.21
CDRT1-204ENST00000395906 RPL35AP18077 110 aaKnown RBP7.51□□□□□ -1.21
CDRT1-204ENST00000395906 PRDX2P32119 198 aa7.51□□□□□ -1.21
CDRT1-204ENST00000395906 HERVK_113P61574 105 aa7.51□□□□□ -1.21
CDRT1-204ENST00000395906 THAP8Q8NA92 274 aa7.51□□□□□ -1.21
CDRT1-204ENST00000395906 RNF185Q96GF1 192 aa7.51□□□□□ -1.21
CDRT1-204ENST00000395906 VKORC1Q9BQB6 163 aa7.51□□□□□ -1.21
CDRT1-204ENST00000395906 V9GYY9 64 aa7.51□□□□□ -1.21
CDRT1-204ENST00000395906 IGKV1D-37A0A075B6S9 117 aa7.5□□□□□ -1.21
CDRT1-204ENST00000395906 A0A0J9YY99 117 aa7.5□□□□□ -1.21
CDRT1-204ENST00000395906 H3BTX0 84 aa7.5□□□□□ -1.21
CDRT1-204ENST00000395906 CXCL5P42830 114 aa7.5□□□□□ -1.21
CDRT1-204ENST00000395906 ZNF415Q09FC8 603 aa7.5□□□□□ -1.21
CDRT1-204ENST00000395906 GGNQ86UU5 652 aa7.5□□□□□ -1.21
CDRT1-204ENST00000395906 FAM19A4Q96LR4 140 aa7.5□□□□□ -1.21
CDRT1-204ENST00000395906 VPS13CQ709C8 3753 aa7.5□□□□□ -1.21
CDRT1-204ENST00000395906 IGLV2-18A0A075B6J9 118 aa7.5□□□□□ -1.21
CDRT1-204ENST00000395906 UPK2O00526 184 aa7.5□□□□□ -1.21
CDRT1-204ENST00000395906 LAGE3Q14657 143 aa7.5□□□□□ -1.21
CDRT1-204ENST00000395906 WDR86Q86TI4 376 aa7.5□□□□□ -1.21
CDRT1-204ENST00000395906 LINC00643Q86TS7 51 aa7.5□□□□□ -1.21
CDRT1-204ENST00000395906 FAM90A1Q86YD7 464 aa7.5□□□□□ -1.21
CDRT1-204ENST00000395906 MDS2Q8NDY4 140 aa7.5□□□□□ -1.21
CDRT1-204ENST00000395906 METTL26Q96S19 204 aa7.5□□□□□ -1.21
CDRT1-204ENST00000395906 GNG12Q9UBI6 72 aa7.5□□□□□ -1.21
CDRT1-204ENST00000395906 TRAV13-1A0A0B4J241 112 aa7.49□□□□□ -1.21
CDRT1-204ENST00000395906 ATOX1O00244 68 aa7.49□□□□□ -1.21
CDRT1-204ENST00000395906 IGHV4-39P01824 125 aa7.49□□□□□ -1.21
CDRT1-204ENST00000395906 ZNF22P17026 224 aaPredicted RBP7.49□□□□□ -1.21
CDRT1-204ENST00000395906 DSCR8Q96T75 97 aa7.49□□□□□ -1.21
CDRT1-204ENST00000395906 MYO18BQ8IUG5 2567 aa7.49□□□□□ -1.21
CDRT1-204ENST00000395906 ZCCHC24Q8N2G6 241 aaKnown RBP7.49□□□□□ -1.21
CDRT1-204ENST00000395906 USP24Q9UPU5 2620 aa7.48□□□□□ -1.21
CDRT1-204ENST00000395906 A0A0G2JNJ9 132 aa7.48□□□□□ -1.21
CDRT1-204ENST00000395906 C5orf38Q86SI9 138 aa7.48□□□□□ -1.21
CDRT1-204ENST00000395906 Q9UFV3 132 aa7.48□□□□□ -1.21
CDRT1-204ENST00000395906 GAS8-AS1O95177 125 aa7.48□□□□□ -1.21
CDRT1-204ENST00000395906 SUB1P53999 127 aaKnown RBP eCLIP7.48□□□□□ -1.21
CDRT1-204ENST00000395906 ERHP84090 104 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms