RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 PSMG4Q5JS54 123 aa14.39□□□□□ -0.11
LMNB1-202ENST00000395354 LINC00518Q8N0U6 118 aa14.39□□□□□ -0.11
LMNB1-202ENST00000395354 ANK2Q01484 3957 aa14.39□□□□□ -0.11
LMNB1-202ENST00000395354 IGKV3D-20A0A0C4DH25 116 aa14.38□□□□□ -0.11
LMNB1-202ENST00000395354 GRIFINA4D1Z8 144 aa14.38□□□□□ -0.11
LMNB1-202ENST00000395354 ESDP10768 282 aa14.38□□□□□ -0.11
LMNB1-202ENST00000395354 ZNF493Q6ZR52 646 aa14.38□□□□□ -0.11
LMNB1-202ENST00000395354 TPPP3Q9BW30 176 aa14.38□□□□□ -0.11
LMNB1-202ENST00000395354 CNFNQ9BYD5 112 aa14.38□□□□□ -0.11
LMNB1-202ENST00000395354 SIGLEC8Q9NYZ4 499 aa14.38□□□□□ -0.11
LMNB1-202ENST00000395354 A0A0J9YX75 114 aa14.37□□□□□ -0.11
LMNB1-202ENST00000395354 SMIM6P0DI80 62 aa14.37□□□□□ -0.11
LMNB1-202ENST00000395354 SRIP30626 198 aa14.37□□□□□ -0.11
LMNB1-202ENST00000395354 DEFB1P60022 68 aa14.37□□□□□ -0.11
LMNB1-202ENST00000395354 PDZD11Q5EBL8 140 aa14.37□□□□□ -0.11
LMNB1-202ENST00000395354 EBLN2Q6P2I7 272 aa14.37□□□□□ -0.11
LMNB1-202ENST00000395354 DYNLRB2Q8TF09 96 aa14.37□□□□□ -0.11
LMNB1-202ENST00000395354 HIST1H2BLQ99880 126 aa14.37□□□□□ -0.11
LMNB1-202ENST00000395354 SSBP4Q9BWG4 385 aaPredicted RBP14.37□□□□□ -0.11
LMNB1-202ENST00000395354 C11orf21Q9P2W6 132 aa14.37□□□□□ -0.11
LMNB1-202ENST00000395354 PKD1L1Q8TDX9 2849 aa14.36□□□□□ -0.11
LMNB1-202ENST00000395354 DUSP14O95147 198 aaKnown RBP14.36□□□□□ -0.11
LMNB1-202ENST00000395354 GPX1P07203 203 aa14.36□□□□□ -0.11
LMNB1-202ENST00000395354 PRR31Q5SQ13 230 aa14.36□□□□□ -0.11
LMNB1-202ENST00000395354 PRR9Q5T870 116 aa14.36□□□□□ -0.11
LMNB1-202ENST00000395354 ALKBH7Q9BT30 221 aaPredicted RBP14.36□□□□□ -0.11
LMNB1-202ENST00000395354 TRAV25A0A0B4J276 109 aa14.35□□□□□ -0.11
LMNB1-202ENST00000395354 KLLNB2CW77 178 aa14.35□□□□□ -0.11
LMNB1-202ENST00000395354 SAP30O75446 220 aa14.35□□□□□ -0.11
LMNB1-202ENST00000395354 FABP4P15090 132 aa14.35□□□□□ -0.11
LMNB1-202ENST00000395354 LEPP41159 167 aa14.35□□□□□ -0.11
LMNB1-202ENST00000395354 DEFB114Q30KQ6 69 aa14.35□□□□□ -0.11
LMNB1-202ENST00000395354 FOXI2Q6ZQN5 318 aa14.35□□□□□ -0.11
LMNB1-202ENST00000395354 BAGE3Q86Y29 109 aa14.35□□□□□ -0.11
LMNB1-202ENST00000395354 TMEM18Q96B42 140 aa14.35□□□□□ -0.11
LMNB1-202ENST00000395354 MCRIP2Q9BUT9 160 aaKnown RBP14.35□□□□□ -0.11
LMNB1-202ENST00000395354 TP53TG3Q9ULZ0 132 aa14.35□□□□□ -0.11
LMNB1-202ENST00000395354 AMBPP02760 352 aa14.34□□□□□ -0.11
LMNB1-202ENST00000395354 TMEM256Q8N2U0 113 aa14.34□□□□□ -0.11
LMNB1-202ENST00000395354 LOC102724200A0A096LPH7 203 aaPredicted RBP14.34□□□□□ -0.11
LMNB1-202ENST00000395354 IGLL1P15814 213 aa14.33□□□□□ -0.12
LMNB1-202ENST00000395354 TMEM61Q8N0U2 210 aa14.33□□□□□ -0.12
LMNB1-202ENST00000395354 OR10D4PQ8NGN7 298 aa14.33□□□□□ -0.12
LMNB1-202ENST00000395354 PACRGQ96M98 296 aaPredicted RBP14.33□□□□□ -0.12
LMNB1-202ENST00000395354 SERF1AO75920 110 aa14.32□□□□□ -0.12
LMNB1-202ENST00000395354 OR5AL1P0C617 328 aa14.32□□□□□ -0.12
LMNB1-202ENST00000395354 RNASE4P34096 147 aaKnown RBP14.32□□□□□ -0.12
LMNB1-202ENST00000395354 C9orf66Q5T8R8 295 aa14.32□□□□□ -0.12
LMNB1-202ENST00000395354 C18orf32Q8TCD1 76 aa14.32□□□□□ -0.12
LMNB1-202ENST00000395354 SPAG8Q99932 426 aaPredicted RBP14.32□□□□□ -0.12
LMNB1-202ENST00000395354 MGAM2Q2M2H8 2515 aa14.32□□□□□ -0.12
LMNB1-202ENST00000395354 SNAI2O43623 268 aa14.31□□□□□ -0.12
LMNB1-202ENST00000395354 TSPOP30536 169 aa14.31□□□□□ -0.12
LMNB1-202ENST00000395354 INSL3P51460 131 aa14.31□□□□□ -0.12
LMNB1-202ENST00000395354 LINC00310P59036 64 aa14.31□□□□□ -0.12
LMNB1-202ENST00000395354 OR4C46A6NHA9 309 aa14.3□□□□□ -0.12
LMNB1-202ENST00000395354 MED14OSP0DP75 135 aa14.3□□□□□ -0.12
LMNB1-202ENST00000395354 NTF3P20783 257 aa14.3□□□□□ -0.12
LMNB1-202ENST00000395354 TWIST1Q15672 202 aa14.3□□□□□ -0.12
LMNB1-202ENST00000395354 DNLZQ5SXM8 178 aa14.3□□□□□ -0.12
LMNB1-202ENST00000395354 C12orf57Q99622 126 aa14.3□□□□□ -0.12
LMNB1-202ENST00000395354 IGHV4-4A0A075B6R2 117 aa14.3□□□□□ -0.12
LMNB1-202ENST00000395354 A8MTW9 85 aa14.3□□□□□ -0.12
LMNB1-202ENST00000395354 NUPR1O60356 82 aa14.3□□□□□ -0.12
LMNB1-202ENST00000395354 CACNG7P62955 275 aa14.3□□□□□ -0.12
LMNB1-202ENST00000395354 DMRTA1Q5VZB9 504 aa14.3□□□□□ -0.12
LMNB1-202ENST00000395354 FAM104BQ5XKR9 115 aa14.3□□□□□ -0.12
LMNB1-202ENST00000395354 TMEM191AQ9H0A3 160 aa14.3□□□□□ -0.12
LMNB1-202ENST00000395354 J3KRW8 73 aa14.29□□□□□ -0.12
LMNB1-202ENST00000395354 IGLV1-51P01701 117 aa14.29□□□□□ -0.12
LMNB1-202ENST00000395354 CD300EQ496F6 205 aaPredicted RBP14.29□□□□□ -0.12
LMNB1-202ENST00000395354 C7orf71A4D174 169 aa14.28□□□□□ -0.12
LMNB1-202ENST00000395354 OXLD1Q5BKU9 147 aa14.28□□□□□ -0.12
LMNB1-202ENST00000395354 Q6ZQT7 251 aa14.28□□□□□ -0.12
LMNB1-202ENST00000395354 KCNS1Q96KK3 526 aa14.28□□□□□ -0.12
LMNB1-202ENST00000395354 ASIPP42127 132 aa14.27□□□□□ -0.12
LMNB1-202ENST00000395354 CDKN1BP46527 198 aa14.27□□□□□ -0.12
LMNB1-202ENST00000395354 DEFB131AP59861 70 aa14.27□□□□□ -0.12
LMNB1-202ENST00000395354 ANXA2RQ3ZCQ2 193 aa14.27□□□□□ -0.12
LMNB1-202ENST00000395354 NAGKQ9UJ70 344 aa14.27□□□□□ -0.12
LMNB1-202ENST00000395354 U3KQK5 164 aa14.27□□□□□ -0.12
LMNB1-202ENST00000395354 HLA-DRB4P13762 266 aa14.26□□□□□ -0.13
LMNB1-202ENST00000395354 AMTNQ6UX39 209 aa14.26□□□□□ -0.13
LMNB1-202ENST00000395354 HLA-DRB4X5D2U9 266 aa14.26□□□□□ -0.13
LMNB1-202ENST00000395354 WIPF1O43516 503 aa14.26□□□□□ -0.13
LMNB1-202ENST00000395354 KIR3DS1Q14943 382 aa14.26□□□□□ -0.13
LMNB1-202ENST00000395354 RCHY1Q96PM5 261 aa14.26□□□□□ -0.13
LMNB1-202ENST00000395354 MAP6D1Q9H9H5 199 aa14.26□□□□□ -0.13
LMNB1-202ENST00000395354 ZNF256Q9Y2P7 627 aaPredicted RBP14.26□□□□□ -0.13
LMNB1-202ENST00000395354 SORL1Q92673 2214 aa14.26□□□□□ -0.13
LMNB1-202ENST00000395354 MUC21A0A0G2JKD1 596 aa14.25□□□□□ -0.13
LMNB1-202ENST00000395354 MUC21A0A140T8X8 626 aa14.25□□□□□ -0.13
LMNB1-202ENST00000395354 ZNF324O75467 553 aaPredicted RBP14.25□□□□□ -0.13
LMNB1-202ENST00000395354 IQCJQ1A5X6 159 aa14.25□□□□□ -0.13
LMNB1-202ENST00000395354 TDRG1Q3Y452 100 aa14.25□□□□□ -0.13
LMNB1-202ENST00000395354 MUC21Q5SSG8 566 aa14.25□□□□□ -0.13
LMNB1-202ENST00000395354 FAM159AQ6UWV7 190 aa14.25□□□□□ -0.13
LMNB1-202ENST00000395354 OR2K2Q8NGT1 345 aa14.25□□□□□ -0.13
LMNB1-202ENST00000395354 H3BMM0 161 aa14.24□□□□□ -0.13
LMNB1-202ENST00000395354 S100A4P26447 101 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms