RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 RAB9AP51151 201 aa11.01□□□□□ -0.65
CLIP2-203ENST00000395060 OR11H1Q8NG94 326 aa11.01□□□□□ -0.65
CLIP2-203ENST00000395060 OR11H2Q8NH07 326 aa11.01□□□□□ -0.65
CLIP2-203ENST00000395060 SCGB3A1Q96QR1 104 aa11.01□□□□□ -0.65
CLIP2-203ENST00000395060 TM2D2Q9BX73 214 aa11.01□□□□□ -0.65
CLIP2-203ENST00000395060 SPG11Q96JI7 2443 aa11.01□□□□□ -0.65
CLIP2-203ENST00000395060 VPS13CQ709C8 3753 aa11.01□□□□□ -0.65
CLIP2-203ENST00000395060 CEACAM3P40198 252 aa11□□□□□ -0.65
CLIP2-203ENST00000395060 SRSF9Q13242 221 aaKnown RBP eCLIP11□□□□□ -0.65
CLIP2-203ENST00000395060 TMEM78Q5T7P6 136 aa11□□□□□ -0.65
CLIP2-203ENST00000395060 C14orf178Q8N769 122 aaPredicted RBP11□□□□□ -0.65
CLIP2-203ENST00000395060 HIGD1BQ9P298 99 aa11□□□□□ -0.65
CLIP2-203ENST00000395060 J3QR89 54 aa11□□□□□ -0.65
CLIP2-203ENST00000395060 ZFP2Q6ZN57 461 aa11□□□□□ -0.65
CLIP2-203ENST00000395060 LINC01549A6NIU2 74 aa11□□□□□ -0.65
CLIP2-203ENST00000395060 SORL1Q92673 2214 aa10.99□□□□□ -0.65
CLIP2-203ENST00000395060 NDUFS8O00217 210 aa10.99□□□□□ -0.65
CLIP2-203ENST00000395060 RPL11P62913 178 aaKnown RBP10.99□□□□□ -0.65
CLIP2-203ENST00000395060 RAXQ9Y2V3 346 aa10.99□□□□□ -0.65
CLIP2-203ENST00000395060 IGLV2-18A0A075B6J9 118 aa10.99□□□□□ -0.65
CLIP2-203ENST00000395060 A0A087WX48 190 aa10.99□□□□□ -0.65
CLIP2-203ENST00000395060 F8W1H4 67 aa10.99□□□□□ -0.65
CLIP2-203ENST00000395060 K7ENP7 123 aa10.99□□□□□ -0.65
CLIP2-203ENST00000395060 S100A4P26447 101 aaKnown RBP10.99□□□□□ -0.65
CLIP2-203ENST00000395060 CKS1BP61024 79 aa10.99□□□□□ -0.65
CLIP2-203ENST00000395060 RRN3P1Q2M238 152 aa10.99□□□□□ -0.65
CLIP2-203ENST00000395060 NRACQ8N912 160 aa10.99□□□□□ -0.65
CLIP2-203ENST00000395060 SYT8Q8NBV8 401 aa10.99□□□□□ -0.65
CLIP2-203ENST00000395060 PLEKHB2Q96CS7 222 aa10.99□□□□□ -0.65
CLIP2-203ENST00000395060 CHTOPQ9Y3Y2 248 aaKnown RBP10.99□□□□□ -0.65
CLIP2-203ENST00000395060 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.98□□□□□ -0.652e-6■■■□□ 17.3
CLIP2-203ENST00000395060 PRR9Q5T870 116 aa10.98□□□□□ -0.65
CLIP2-203ENST00000395060 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.98□□□□□ -0.65
CLIP2-203ENST00000395060 B9A039 149 aa10.98□□□□□ -0.65
CLIP2-203ENST00000395060 CDSNQ15517 529 aa10.98□□□□□ -0.65
CLIP2-203ENST00000395060 ATP6V0BQ99437 205 aa10.98□□□□□ -0.65
CLIP2-203ENST00000395060 IGHV3OR16-10A0A075B7F0 116 aa10.98□□□□□ -0.65
CLIP2-203ENST00000395060 ZNF815PA8K554 130 aa10.98□□□□□ -0.65
CLIP2-203ENST00000395060 ARL3P36405 182 aa10.98□□□□□ -0.65
CLIP2-203ENST00000395060 H7C2G1 150 aa10.97□□□□□ -0.65
CLIP2-203ENST00000395060 HOXA3O43365 443 aaPredicted RBP10.97□□□□□ -0.65
CLIP2-203ENST00000395060 SLC25A16P16260 332 aa10.97□□□□□ -0.65
CLIP2-203ENST00000395060 SRSF1Q07955 248 aaKnown RBP eCLIP10.97□□□□□ -0.65
CLIP2-203ENST00000395060 PRADC1Q9BSG0 188 aa10.97□□□□□ -0.65
CLIP2-203ENST00000395060 IGHV7-81A0A0B4J1V7 117 aa10.96□□□□□ -0.65
CLIP2-203ENST00000395060 IGHV7-4-1A0A0J9YVY3 117 aa10.96□□□□□ -0.65
CLIP2-203ENST00000395060 CCL21O00585 134 aa10.96□□□□□ -0.65
CLIP2-203ENST00000395060 BUB3O43684 328 aa10.96□□□□□ -0.65
CLIP2-203ENST00000395060 LINC01559Q495D7 138 aa10.96□□□□□ -0.65
CLIP2-203ENST00000395060 VMO1Q7Z5L0 202 aa10.96□□□□□ -0.65
CLIP2-203ENST00000395060 MYMXA0A1B0GTQ4 84 aa10.96□□□□□ -0.66
CLIP2-203ENST00000395060 F6UB75 175 aa10.96□□□□□ -0.66
CLIP2-203ENST00000395060 C16orf92Q96LL3 132 aa10.96□□□□□ -0.66
CLIP2-203ENST00000395060 MSRB2Q9Y3D2 182 aa10.96□□□□□ -0.66
CLIP2-203ENST00000395060 A0A1B0GV72 72 aa10.95□□□□□ -0.66
CLIP2-203ENST00000395060 PRSS29PA6NIE9 313 aa10.95□□□□□ -0.66
CLIP2-203ENST00000395060 ATP6V0E1O15342 81 aa10.95□□□□□ -0.66
CLIP2-203ENST00000395060 LGALS1P09382 135 aaKnown RBP10.95□□□□□ -0.66
CLIP2-203ENST00000395060 HIVEP3Q5T1R4 2406 aa10.95□□□□□ -0.66
CLIP2-203ENST00000395060 TRAV26-1A0A087WT03 109 aa10.95□□□□□ -0.66
CLIP2-203ENST00000395060 TMEM238LA0A1B0GVL6 79 aa10.95□□□□□ -0.66
CLIP2-203ENST00000395060 MORN3Q6PF18 240 aaPredicted RBP10.95□□□□□ -0.66
CLIP2-203ENST00000395060 SMPXQ9UHP9 88 aa10.95□□□□□ -0.66
CLIP2-203ENST00000395060 F8VRH5 84 aa10.95□□□□□ -0.66
CLIP2-203ENST00000395060 H7C1H1 209 aa10.95□□□□□ -0.66
CLIP2-203ENST00000395060 SRD5A1P18405 259 aa10.95□□□□□ -0.66
CLIP2-203ENST00000395060 C8orf86Q6ZUL3 223 aa10.95□□□□□ -0.66
CLIP2-203ENST00000395060 TMEM219Q86XT9 240 aa10.95□□□□□ -0.66
CLIP2-203ENST00000395060 TRBV7-3A0A075B6L6 115 aa10.94□□□□□ -0.66
CLIP2-203ENST00000395060 NFE4Q86UQ8 179 aa10.94□□□□□ -0.66
CLIP2-203ENST00000395060 RNF5Q99942 180 aa10.94□□□□□ -0.66
CLIP2-203ENST00000395060 IGHV3-64A0A075B6Q5 118 aa10.94□□□□□ -0.66
CLIP2-203ENST00000395060 MT-ATP8P03928 68 aa10.94□□□□□ -0.66
CLIP2-203ENST00000395060 NPBQ8NG41 125 aa10.94□□□□□ -0.66
CLIP2-203ENST00000395060 SMIM2Q9BVW6 85 aa10.94□□□□□ -0.66
CLIP2-203ENST00000395060 TRAV8-2A0A0B4J237 113 aa10.93□□□□□ -0.66
CLIP2-203ENST00000395060 PLNP26678 52 aa10.93□□□□□ -0.66
CLIP2-203ENST00000395060 SRSF8Q9BRL6 282 aaKnown RBP10.93□□□□□ -0.66
CLIP2-203ENST00000395060 CNFNQ9BYD5 112 aa10.93□□□□□ -0.66
CLIP2-203ENST00000395060 C2orf66Q6UXQ4 117 aa10.93□□□□□ -0.66
CLIP2-203ENST00000395060 DOPEY2Q9Y3R5 2298 aa10.93□□□□□ -0.66
CLIP2-203ENST00000395060 GNRH2O43555 120 aa10.93□□□□□ -0.66
CLIP2-203ENST00000395060 SMCPP49901 116 aaPredicted RBP10.93□□□□□ -0.66
CLIP2-203ENST00000395060 PRO0461Q9UI25 63 aa10.93□□□□□ -0.66
CLIP2-203ENST00000395060 PHLDA3Q9Y5J5 127 aa10.93□□□□□ -0.66
CLIP2-203ENST00000395060 SPINK8P0C7L1 97 aa10.92□□□□□ -0.66
CLIP2-203ENST00000395060 KIR2DL4Q99706 377 aa10.92□□□□□ -0.66
CLIP2-203ENST00000395060 JPT2Q9H910 190 aa10.92□□□□□ -0.66
CLIP2-203ENST00000395060 DUSP14O95147 198 aaKnown RBP10.92□□□□□ -0.66
CLIP2-203ENST00000395060 SUMO2P61956 95 aaKnown RBP10.92□□□□□ -0.66
CLIP2-203ENST00000395060 FHL3Q13643 280 aa10.92□□□□□ -0.66
CLIP2-203ENST00000395060 CLPSL1A2RUU4 121 aa10.91□□□□□ -0.66
CLIP2-203ENST00000395060 SCGB2A1O75556 95 aa10.91□□□□□ -0.66
CLIP2-203ENST00000395060 SCGB1C2P0DMR2 95 aa10.91□□□□□ -0.66
CLIP2-203ENST00000395060 ZFP36P26651 326 aaKnown RBP10.91□□□□□ -0.66
CLIP2-203ENST00000395060 RNASE4P34096 147 aaKnown RBP10.91□□□□□ -0.66
CLIP2-203ENST00000395060 PIFOQ8TCI5 191 aa10.91□□□□□ -0.66
CLIP2-203ENST00000395060 RASL10AQ92737 203 aa10.91□□□□□ -0.66
CLIP2-203ENST00000395060 CCDC140Q96MF4 163 aa10.91□□□□□ -0.66
CLIP2-203ENST00000395060 ZFAND3Q9H8U3 227 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 1115.6 ms