RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 SCGB2A1O75556 95 aa10.26□□□□□ -0.77
GTF2F1-201ENST00000394456 TMEM78Q5T7P6 136 aa10.26□□□□□ -0.77
GTF2F1-201ENST00000394456 BOD1L2Q8IYS8 172 aa10.26□□□□□ -0.77
GTF2F1-201ENST00000394456 RAB37Q96AX2 223 aa10.26□□□□□ -0.77
GTF2F1-201ENST00000394456 C16orf92Q96LL3 132 aa10.26□□□□□ -0.77
GTF2F1-201ENST00000394456 COX6B1P14854 86 aa10.26□□□□□ -0.77
GTF2F1-201ENST00000394456 SRD5A1P18405 259 aa10.26□□□□□ -0.77
GTF2F1-201ENST00000394456 CD5LO43866 347 aa10.25□□□□□ -0.77
GTF2F1-201ENST00000394456 RNF151Q2KHN1 245 aa10.25□□□□□ -0.77
GTF2F1-201ENST00000394456 WFDC12Q8WWY7 111 aa10.25□□□□□ -0.77
GTF2F1-201ENST00000394456 FOXC2Q99958 501 aa10.25□□□□□ -0.77
GTF2F1-201ENST00000394456 SLC50A1Q9BRV3 221 aa10.25□□□□□ -0.77
GTF2F1-201ENST00000394456 IGLV2-18A0A075B6J9 118 aa10.25□□□□□ -0.77
GTF2F1-201ENST00000394456 PRSS1P07477 247 aa10.25□□□□□ -0.77
GTF2F1-201ENST00000394456 ODF1Q14990 250 aa10.25□□□□□ -0.77
GTF2F1-201ENST00000394456 TMEM190Q8WZ59 177 aa10.25□□□□□ -0.77
GTF2F1-201ENST00000394456 MEGF9Q9H1U4 602 aa10.25□□□□□ -0.77
GTF2F1-201ENST00000394456 U3KQE9 123 aa10.25□□□□□ -0.77
GTF2F1-201ENST00000394456 DOPEY2Q9Y3R5 2298 aa10.24□□□□□ -0.77
GTF2F1-201ENST00000394456 BLCAPP62952 87 aa10.24□□□□□ -0.77
GTF2F1-201ENST00000394456 GTSCR1Q86UQ5 136 aa10.24□□□□□ -0.77
GTF2F1-201ENST00000394456 ARL6IP6Q8N6S5 226 aa10.24□□□□□ -0.77
GTF2F1-201ENST00000394456 NRACQ8N912 160 aa10.24□□□□□ -0.77
GTF2F1-201ENST00000394456 MXRA5Q9NR99 2828 aa10.24□□□□□ -0.77
GTF2F1-201ENST00000394456 B4DSR2 109 aa10.24□□□□□ -0.77
GTF2F1-201ENST00000394456 ADAMTSL5Q6ZMM2 481 aa10.24□□□□□ -0.77
GTF2F1-201ENST00000394456 OR2K2Q8NGT1 345 aa10.24□□□□□ -0.77
GTF2F1-201ENST00000394456 HHLA3Q9XRX5 114 aa10.24□□□□□ -0.77
GTF2F1-201ENST00000394456 TEX15Q9BXT5 2789 aa10.24□□□□□ -0.77
GTF2F1-201ENST00000394456 CREBBPQ92793 2442 aa10.23□□□□□ -0.77
GTF2F1-201ENST00000394456 TRBV7-1A0A0A6YYK4 115 aa10.23□□□□□ -0.77
GTF2F1-201ENST00000394456 RBAKDNA6NC62 111 aa10.23□□□□□ -0.77
GTF2F1-201ENST00000394456 FCER1GP30273 86 aa10.23□□□□□ -0.77
GTF2F1-201ENST00000394456 ARL3P36405 182 aa10.23□□□□□ -0.77
GTF2F1-201ENST00000394456 KRTAP10-9P60411 292 aa10.23□□□□□ -0.77
GTF2F1-201ENST00000394456 C19orf54Q5BKX5 351 aa10.23□□□□□ -0.77
GTF2F1-201ENST00000394456 TLN2Q9Y4G6 2542 aa10.23□□□□□ -0.77
GTF2F1-201ENST00000394456 CUBNO60494 3623 aa10.23□□□□□ -0.77
GTF2F1-201ENST00000394456 M0R381 172 aa10.22□□□□□ -0.77
GTF2F1-201ENST00000394456 RPL11P62913 178 aaKnown RBP10.22□□□□□ -0.77
GTF2F1-201ENST00000394456 SRSF2Q01130 221 aaKnown RBP10.22□□□□□ -0.77
GTF2F1-201ENST00000394456 KLK9Q2XQG4 91 aa10.22□□□□□ -0.77
GTF2F1-201ENST00000394456 TMEM95Q3KNT9 176 aa10.22□□□□□ -0.77
GTF2F1-201ENST00000394456 SPANXN1Q5VSR9 72 aa10.22□□□□□ -0.77
GTF2F1-201ENST00000394456 KLK9Q9UKQ9 250 aa10.22□□□□□ -0.77
GTF2F1-201ENST00000394456 APCP25054 2843 aa10.22□□□□□ -0.77
GTF2F1-201ENST00000394456 H3BUT2 72 aa10.22□□□□□ -0.77
GTF2F1-201ENST00000394456 C9orf47Q6ZRZ4 202 aa10.22□□□□□ -0.77
GTF2F1-201ENST00000394456 SMIM17P0DL12 118 aa10.21□□□□□ -0.77
GTF2F1-201ENST00000394456 RPL39LQ96EH5 51 aaKnown RBP10.21□□□□□ -0.78
GTF2F1-201ENST00000394456 TMEM160Q9NX00 188 aa10.21□□□□□ -0.78
GTF2F1-201ENST00000394456 MRPL35Q9NZE8 188 aaKnown RBP10.21□□□□□ -0.78
GTF2F1-201ENST00000394456 TENM4Q6N022 2769 aa10.21□□□□□ -0.78
GTF2F1-201ENST00000394456 K7ERJ3 54 aa10.2□□□□□ -0.78
GTF2F1-201ENST00000394456 GNRH2O43555 120 aa10.2□□□□□ -0.78
GTF2F1-201ENST00000394456 PPBPP02775 128 aa10.2□□□□□ -0.78
GTF2F1-201ENST00000394456 PCP4P48539 62 aa10.2□□□□□ -0.78
GTF2F1-201ENST00000394456 RAB9AP51151 201 aa10.2□□□□□ -0.78
GTF2F1-201ENST00000394456 ZFAND2AQ8N6M9 145 aa10.2□□□□□ -0.78
GTF2F1-201ENST00000394456 Q8N8P6 123 aa10.2□□□□□ -0.78
GTF2F1-201ENST00000394456 OR1N2Q8NGR9 330 aa10.2□□□□□ -0.78
GTF2F1-201ENST00000394456 A6NDX4 124 aa10.2□□□□□ -0.78
GTF2F1-201ENST00000394456 DSCR9P59020 149 aa10.2□□□□□ -0.78
GTF2F1-201ENST00000394456 CST9LQ9H4G1 147 aa10.2□□□□□ -0.78
GTF2F1-201ENST00000394456 NXT2Q9NPJ8 142 aaKnown RBP10.2□□□□□ -0.78
GTF2F1-201ENST00000394456 CR1P17927 2039 aa10.2□□□□□ -0.78
GTF2F1-201ENST00000394456 LINC01546A6NGU7 62 aa10.2□□□□□ -0.78
GTF2F1-201ENST00000394456 SLC25A16P16260 332 aa10.2□□□□□ -0.78
GTF2F1-201ENST00000394456 FXYD2P54710 66 aa10.2□□□□□ -0.78
GTF2F1-201ENST00000394456 ZC2HC1BQ5TFG8 222 aa10.2□□□□□ -0.78
GTF2F1-201ENST00000394456 C10orf99Q6UWK7 81 aa10.2□□□□□ -0.78
GTF2F1-201ENST00000394456 NEGR1Q7Z3B1 354 aa10.2□□□□□ -0.78
GTF2F1-201ENST00000394456 MAPKAPK5-AS1Q8N8E1 139 aa10.2□□□□□ -0.78
GTF2F1-201ENST00000394456 TGFAP01135 160 aa10.19□□□□□ -0.78
GTF2F1-201ENST00000394456 PF4V1P10720 104 aa10.19□□□□□ -0.78
GTF2F1-201ENST00000394456 C14orf178Q8N769 122 aaPredicted RBP10.19□□□□□ -0.78
GTF2F1-201ENST00000394456 PPP1R14DQ9NXH3 145 aa10.19□□□□□ -0.78
GTF2F1-201ENST00000394456 CBY1Q9Y3M2 126 aa10.19□□□□□ -0.78
GTF2F1-201ENST00000394456 RNF223E7ERA6 249 aa10.19□□□□□ -0.78
GTF2F1-201ENST00000394456 RNASE4P34096 147 aaKnown RBP10.19□□□□□ -0.78
GTF2F1-201ENST00000394456 ANXA2RQ3ZCQ2 193 aa10.19□□□□□ -0.78
GTF2F1-201ENST00000394456 DPF1Q92782 380 aa10.19□□□□□ -0.78
GTF2F1-201ENST00000394456 ZMAT4Q9H898 229 aa10.19□□□□□ -0.78
GTF2F1-201ENST00000394456 A0A096LNT2 108 aa10.18□□□□□ -0.78
GTF2F1-201ENST00000394456 SOCS3O14543 225 aa10.18□□□□□ -0.78
GTF2F1-201ENST00000394456 SAP30O75446 220 aa10.18□□□□□ -0.78
GTF2F1-201ENST00000394456 GCSHP23434 173 aa10.18□□□□□ -0.78
GTF2F1-201ENST00000394456 LINC01356Q8N9X3 169 aa10.18□□□□□ -0.78
GTF2F1-201ENST00000394456 PEF1Q9UBV8 284 aaKnown RBP10.18□□□□□ -0.78
GTF2F1-201ENST00000394456 GAGE12BA1L429 117 aa10.18□□□□□ -0.78
GTF2F1-201ENST00000394456 IGKCP01834 107 aa10.18□□□□□ -0.78
GTF2F1-201ENST00000394456 IGHG2P01859 326 aa10.18□□□□□ -0.78
GTF2F1-201ENST00000394456 CCDC168Q8NDH2 2452 aa10.18□□□□□ -0.78
GTF2F1-201ENST00000394456 SORL1Q92673 2214 aa10.17□□□□□ -0.78
GTF2F1-201ENST00000394456 SEC11AP67812 179 aa10.17□□□□□ -0.78
GTF2F1-201ENST00000394456 HSD52Q0P140 79 aa10.17□□□□□ -0.78
GTF2F1-201ENST00000394456 IGHV4-59P01825 116 aa10.17□□□□□ -0.78
GTF2F1-201ENST00000394456 S100A7P31151 101 aa10.17□□□□□ -0.78
GTF2F1-201ENST00000394456 CRIP2P52943 208 aaPredicted RBP10.17□□□□□ -0.78
GTF2F1-201ENST00000394456 LAGE3Q14657 143 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms