RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 LYNX1G3V0Z9 82 aa6.7□□□□□ -1.34
GABRA1-202ENST00000393943 CTSGP08311 255 aa6.7□□□□□ -1.34
GABRA1-202ENST00000393943 LYNX1P0DP58 116 aa6.7□□□□□ -1.34
GABRA1-202ENST00000393943 COL8A2P25067 703 aa6.7□□□□□ -1.34
GABRA1-202ENST00000393943 ZDBF2Q9HCK1 2354 aa6.69□□□□□ -1.34
GABRA1-202ENST00000393943 S100A7L2Q5SY68 101 aa6.69□□□□□ -1.34
GABRA1-202ENST00000393943 Q6ZUT4 128 aa6.69□□□□□ -1.34
GABRA1-202ENST00000393943 RASL10AQ92737 203 aa6.69□□□□□ -1.34
GABRA1-202ENST00000393943 TRAV26-1A0A087WT03 109 aa6.69□□□□□ -1.34
GABRA1-202ENST00000393943 TMEM126AQ9H061 195 aa6.69□□□□□ -1.34
GABRA1-202ENST00000393943 MSRB1Q9NZV6 116 aa6.69□□□□□ -1.34
GABRA1-202ENST00000393943 H3BT86 120 aa6.69□□□□□ -1.34
GABRA1-202ENST00000393943 LCNL1Q6ZST4 164 aa6.69□□□□□ -1.34
GABRA1-202ENST00000393943 ZMAT4Q9H898 229 aa6.69□□□□□ -1.34
GABRA1-202ENST00000393943 DAZ1Q9NQZ3 744 aaKnown RBP6.69□□□□□ -1.34
GABRA1-202ENST00000393943 ANXA2RQ3ZCQ2 193 aa6.68□□□□□ -1.34
GABRA1-202ENST00000393943 ZNF876PQ49A33 203 aa6.68□□□□□ -1.34
GABRA1-202ENST00000393943 BAALCQ8WXS3 180 aa6.68□□□□□ -1.34
GABRA1-202ENST00000393943 RITA1Q96K30 269 aa6.68□□□□□ -1.34
GABRA1-202ENST00000393943 TP73-AS1Q9UF72 201 aa6.68□□□□□ -1.34
GABRA1-202ENST00000393943 ATP6V0E1O15342 81 aa6.68□□□□□ -1.34
GABRA1-202ENST00000393943 CRIP1P50238 77 aa6.68□□□□□ -1.34
GABRA1-202ENST00000393943 Q71RC1 249 aaPredicted RBP6.68□□□□□ -1.34
GABRA1-202ENST00000393943 PRSS33Q8NF86 280 aa6.68□□□□□ -1.34
GABRA1-202ENST00000393943 DYNLRB2Q8TF09 96 aa6.68□□□□□ -1.34
GABRA1-202ENST00000393943 RBMY1BA6NDE4 496 aaKnown RBP6.68□□□□□ -1.34
GABRA1-202ENST00000393943 RBMY1EA6NEQ0 496 aaKnown RBP6.68□□□□□ -1.34
GABRA1-202ENST00000393943 RHODO00212 210 aa6.68□□□□□ -1.34
GABRA1-202ENST00000393943 RBMY1DP0C7P1 496 aaKnown RBP6.68□□□□□ -1.34
GABRA1-202ENST00000393943 RBMY1A1P0DJD3 496 aaKnown RBP6.68□□□□□ -1.34
GABRA1-202ENST00000393943 RBMY1CP0DJD4 496 aa6.68□□□□□ -1.34
GABRA1-202ENST00000393943 GATA1P15976 413 aaPredicted RBP6.68□□□□□ -1.34
GABRA1-202ENST00000393943 PRB3Q04118 309 aaPredicted RBP6.68□□□□□ -1.34
GABRA1-202ENST00000393943 TCF15Q12870 199 aa6.68□□□□□ -1.34
GABRA1-202ENST00000393943 CADP27708 2225 aa6.68□□□□□ -1.34
GABRA1-202ENST00000393943 NDUFA11Q86Y39 141 aa6.68□□□□□ -1.34
GABRA1-202ENST00000393943 GTF3C1Q12789 2109 aa6.67□□□□□ -1.34
GABRA1-202ENST00000393943 IGHV1-69P01742 117 aa6.67□□□□□ -1.34
GABRA1-202ENST00000393943 SRD5A1P18405 259 aa6.67□□□□□ -1.34
GABRA1-202ENST00000393943 NTN5Q8WTR8 489 aaPredicted RBP6.67□□□□□ -1.34
GABRA1-202ENST00000393943 RNF185Q96GF1 192 aa6.67□□□□□ -1.34
GABRA1-202ENST00000393943 A0A0B4J2C4 111 aa6.67□□□□□ -1.34
GABRA1-202ENST00000393943 RPL32P62910 135 aaKnown RBP6.67□□□□□ -1.34
GABRA1-202ENST00000393943 KLRB1Q12918 225 aa6.67□□□□□ -1.34
GABRA1-202ENST00000393943 C15orf53Q8NAA6 179 aa6.67□□□□□ -1.34
GABRA1-202ENST00000393943 TTTY13Q9BZ97 58 aa6.67□□□□□ -1.34
GABRA1-202ENST00000393943 HTN1P15515 57 aa6.67□□□□□ -1.34
GABRA1-202ENST00000393943 NEXN-AS1Q8NBZ9 246 aa6.67□□□□□ -1.34
GABRA1-202ENST00000393943 DYSFO75923 2080 aa6.67□□□□□ -1.34
GABRA1-202ENST00000393943 FOXC1Q12948 553 aa6.67□□□□□ -1.34
GABRA1-202ENST00000393943 LINC01620Q4KN68 170 aa6.67□□□□□ -1.34
GABRA1-202ENST00000393943 KHDC1LQ5JSQ8 128 aa6.67□□□□□ -1.34
GABRA1-202ENST00000393943 DUX5Q96PT3 197 aa6.67□□□□□ -1.34
GABRA1-202ENST00000393943 RHPN1-AS1Q9BWJ2 59 aa6.67□□□□□ -1.34
GABRA1-202ENST00000393943 IGHV4-4A0A075B6R2 117 aa6.66□□□□□ -1.34
GABRA1-202ENST00000393943 TRBV10-2A0A0K0K1G8 114 aa6.66□□□□□ -1.34
GABRA1-202ENST00000393943 ATP5G1P05496 136 aa6.66□□□□□ -1.34
GABRA1-202ENST00000393943 SEM1Q6ZVN7 128 aa6.66□□□□□ -1.34
GABRA1-202ENST00000393943 DUX3Q96PT4 197 aa6.66□□□□□ -1.34
GABRA1-202ENST00000393943 TANC2Q9HCD6 1990 aa6.66□□□□□ -1.34
GABRA1-202ENST00000393943 IGKV2D-26A0A0A0MRZ7 120 aa6.66□□□□□ -1.34
GABRA1-202ENST00000393943 GHRHP01286 108 aa6.66□□□□□ -1.34
GABRA1-202ENST00000393943 OR13C6PQ8NH95 151 aa6.66□□□□□ -1.34
GABRA1-202ENST00000393943 FANCD2OSQ96PS1 177 aa6.66□□□□□ -1.34
GABRA1-202ENST00000393943 ZNF415Q09FC8 603 aa6.66□□□□□ -1.34
GABRA1-202ENST00000393943 CFAP126Q5VTH2 177 aa6.66□□□□□ -1.34
GABRA1-202ENST00000393943 ZFP2Q6ZN57 461 aa6.66□□□□□ -1.34
GABRA1-202ENST00000393943 ADAMTS20P59510 1910 aa6.65□□□□□ -1.34
GABRA1-202ENST00000393943 B5MCH6 92 aa6.65□□□□□ -1.34
GABRA1-202ENST00000393943 C9orf153Q5TBE3 101 aa6.65□□□□□ -1.34
GABRA1-202ENST00000393943 NDUFA12Q9UI09 145 aa6.65□□□□□ -1.34
GABRA1-202ENST00000393943 COLQQ9Y215 455 aaPredicted RBP6.65□□□□□ -1.34
GABRA1-202ENST00000393943 NDPQ00604 133 aa6.65□□□□□ -1.34
GABRA1-202ENST00000393943 TRBV7-3A0A075B6L6 115 aa6.65□□□□□ -1.35
GABRA1-202ENST00000393943 P0DMU3 169 aa6.65□□□□□ -1.35
GABRA1-202ENST00000393943 FAM231AP0DMU4 169 aa6.65□□□□□ -1.35
GABRA1-202ENST00000393943 FAM231CP0DMU5 169 aa6.65□□□□□ -1.35
GABRA1-202ENST00000393943 PRB4P10163 310 aaPredicted RBP6.65□□□□□ -1.35
GABRA1-202ENST00000393943 FOXE3Q13461 319 aa6.65□□□□□ -1.35
GABRA1-202ENST00000393943 TMEM95Q3KNT9 176 aa6.65□□□□□ -1.35
GABRA1-202ENST00000393943 HHLA3Q9XRX5 114 aa6.65□□□□□ -1.35
GABRA1-202ENST00000393943 ZNF318Q5VUA4 2279 aa6.65□□□□□ -1.35
GABRA1-202ENST00000393943 IGHV7-81A0A0B4J1V7 117 aa6.65□□□□□ -1.35
GABRA1-202ENST00000393943 ZNF80P51504 273 aaPredicted RBP6.65□□□□□ -1.35
GABRA1-202ENST00000393943 SVIPQ8NHG7 77 aa6.65□□□□□ -1.35
GABRA1-202ENST00000393943 MED13Q9UHV7 2174 aa6.65□□□□□ -1.35
GABRA1-202ENST00000393943 LINC01546A6NGU7 62 aa6.64□□□□□ -1.35
GABRA1-202ENST00000393943 SAA4P35542 130 aa6.64□□□□□ -1.35
GABRA1-202ENST00000393943 CARD19Q96LW7 228 aa6.64□□□□□ -1.35
GABRA1-202ENST00000393943 ABCA1O95477 2261 aa6.64□□□□□ -1.35
GABRA1-202ENST00000393943 TRAV12-3A0A0B4J271 114 aa6.64□□□□□ -1.35
GABRA1-202ENST00000393943 A4D1N5 150 aa6.64□□□□□ -1.35
GABRA1-202ENST00000393943 CRPP02741 224 aa6.64□□□□□ -1.35
GABRA1-202ENST00000393943 SLC25A29Q8N8R3 303 aa6.64□□□□□ -1.35
GABRA1-202ENST00000393943 SPXQ9BT56 116 aa6.64□□□□□ -1.35
GABRA1-202ENST00000393943 PEMTQ9UBM1 199 aa6.64□□□□□ -1.35
GABRA1-202ENST00000393943 IGHV3-64A0A075B6Q5 118 aa6.64□□□□□ -1.35
GABRA1-202ENST00000393943 IGHV1OR15-1A0A075B7D0 117 aa6.64□□□□□ -1.35
GABRA1-202ENST00000393943 A0A087WWL8 130 aa6.64□□□□□ -1.35
GABRA1-202ENST00000393943 TRAV8-3A0A0A6YYJ7 113 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms