RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 Q86TA4 180 aa13.44□□□□□ -0.26
PDLIM7-204ENST00000393546 NDUFAF3Q9BU61 184 aa13.44□□□□□ -0.26
PDLIM7-204ENST00000393546 SDF2L1Q9HCN8 221 aa13.44□□□□□ -0.26
PDLIM7-204ENST00000393546 TRGV1A0A0A0MS02 117 aa13.43□□□□□ -0.26
PDLIM7-204ENST00000393546 TRBV6-1A0A0K0K1D8 114 aa13.43□□□□□ -0.26
PDLIM7-204ENST00000393546 F5H768 121 aa13.43□□□□□ -0.26
PDLIM7-204ENST00000393546 SPINK4O60575 86 aa13.43□□□□□ -0.26
PDLIM7-204ENST00000393546 IFNA1P01562 189 aa13.43□□□□□ -0.26
PDLIM7-204ENST00000393546 PFN1P07737 140 aaKnown RBP13.43□□□□□ -0.26
PDLIM7-204ENST00000393546 BLOC1S1P78537 153 aa13.43□□□□□ -0.26
PDLIM7-204ENST00000393546 Q6ZTI0 123 aa13.43□□□□□ -0.26
PDLIM7-204ENST00000393546 TXNDC17Q9BRA2 123 aa13.43□□□□□ -0.26
PDLIM7-204ENST00000393546 MDFICQ9P1T7 246 aa13.43□□□□□ -0.26
PDLIM7-204ENST00000393546 SCO2A0A1W2PP80 73 aa13.42□□□□□ -0.26
PDLIM7-204ENST00000393546 FABP5P3A8MUU1 101 aa13.42□□□□□ -0.26
PDLIM7-204ENST00000393546 GNRH2O43555 120 aa13.42□□□□□ -0.26
PDLIM7-204ENST00000393546 LY6G6CO95867 125 aa13.42□□□□□ -0.26
PDLIM7-204ENST00000393546 LINC00476Q8WZB0 136 aa13.42□□□□□ -0.26
PDLIM7-204ENST00000393546 SPXQ9BT56 116 aa13.42□□□□□ -0.26
PDLIM7-204ENST00000393546 TRGV2A0A075B6R0 118 aa13.41□□□□□ -0.26
PDLIM7-204ENST00000393546 LGALS9BQ3B8N2 356 aa13.41□□□□□ -0.26
PDLIM7-204ENST00000393546 ALMS1Q8TCU4 4167 aa13.41□□□□□ -0.26
PDLIM7-204ENST00000393546 LTAP01374 205 aa13.4□□□□□ -0.26
PDLIM7-204ENST00000393546 LGALS9CQ6DKI2 356 aa13.4□□□□□ -0.26
PDLIM7-204ENST00000393546 TMEM88Q6PEY1 159 aa13.4□□□□□ -0.26
PDLIM7-204ENST00000393546 COX8CQ7Z4L0 72 aa13.4□□□□□ -0.26
PDLIM7-204ENST00000393546 C11orf21Q9P2W6 132 aa13.4□□□□□ -0.26
PDLIM7-204ENST00000393546 SACSQ9NZJ4 4579 aa13.39□□□□□ -0.27
PDLIM7-204ENST00000393546 IGHV3-16A0A0C4DH30 117 aa13.39□□□□□ -0.27
PDLIM7-204ENST00000393546 TYMSP04818 313 aa13.39□□□□□ -0.27
PDLIM7-204ENST00000393546 MRPL16Q9NX20 251 aaKnown RBP13.39□□□□□ -0.27
PDLIM7-204ENST00000393546 DNAH1Q9P2D7 4330 aa13.38□□□□□ -0.27
PDLIM7-204ENST00000393546 TAGLN2P37802 199 aaKnown RBP13.38□□□□□ -0.27
PDLIM7-204ENST00000393546 OR5I1Q13606 314 aa13.38□□□□□ -0.27
PDLIM7-204ENST00000393546 ZC2HC1AQ96GY0 325 aa13.38□□□□□ -0.27
PDLIM7-204ENST00000393546 C18orf15Q96N68 181 aa13.38□□□□□ -0.27
PDLIM7-204ENST00000393546 VAX2Q9UIW0 290 aa13.38□□□□□ -0.27
PDLIM7-204ENST00000393546 PDE6DO43924 150 aa13.37□□□□□ -0.27
PDLIM7-204ENST00000393546 BCL2P10415 239 aa13.37□□□□□ -0.27
PDLIM7-204ENST00000393546 MEF2BQ02080 365 aaPredicted RBP13.37□□□□□ -0.27
PDLIM7-204ENST00000393546 FAM162BQ5T6X4 162 aa13.37□□□□□ -0.27
PDLIM7-204ENST00000393546 BAGE2Q86Y30 109 aa13.37□□□□□ -0.27
PDLIM7-204ENST00000393546 C11orf52Q96A22 123 aa13.37□□□□□ -0.27
PDLIM7-204ENST00000393546 ORM1P02763 201 aa13.36□□□□□ -0.27
PDLIM7-204ENST00000393546 CRIP1P50238 77 aa13.36□□□□□ -0.27
PDLIM7-204ENST00000393546 C15orf53Q8NAA6 179 aa13.36□□□□□ -0.27
PDLIM7-204ENST00000393546 M0R2P5 195 aa13.35□□□□□ -0.27
PDLIM7-204ENST00000393546 SH2D1AO60880 128 aa13.35□□□□□ -0.27
PDLIM7-204ENST00000393546 RPL35P42766 123 aaKnown RBP13.35□□□□□ -0.27
PDLIM7-204ENST00000393546 ZNF674Q2M3X9 581 aa13.35□□□□□ -0.27
PDLIM7-204ENST00000393546 RASL10AQ92737 203 aa13.35□□□□□ -0.27
PDLIM7-204ENST00000393546 IGKV3D-20A0A0C4DH25 116 aa13.34□□□□□ -0.27
PDLIM7-204ENST00000393546 B4DEV8 164 aa13.34□□□□□ -0.27
PDLIM7-204ENST00000393546 HOXA5P20719 270 aa13.34□□□□□ -0.27
PDLIM7-204ENST00000393546 NHLRC2Q8NBF2 726 aa13.34□□□□□ -0.27
PDLIM7-204ENST00000393546 LYPD6BQ8NI32 183 aa13.34□□□□□ -0.27
PDLIM7-204ENST00000393546 MED9Q9NWA0 146 aa13.34□□□□□ -0.27
PDLIM7-204ENST00000393546 P0DMU3 169 aa13.33□□□□□ -0.28
PDLIM7-204ENST00000393546 FAM231AP0DMU4 169 aa13.33□□□□□ -0.28
PDLIM7-204ENST00000393546 FAM231CP0DMU5 169 aa13.33□□□□□ -0.28
PDLIM7-204ENST00000393546 S100A4P26447 101 aaKnown RBP13.33□□□□□ -0.28
PDLIM7-204ENST00000393546 MLST8Q9BVC4 326 aa13.33□□□□□ -0.28
PDLIM7-204ENST00000393546 TRAV26-1A0A087WT03 109 aa13.32□□□□□ -0.28
PDLIM7-204ENST00000393546 KRBOX1C9JBD0 128 aa13.32□□□□□ -0.28
PDLIM7-204ENST00000393546 IGHV3-53P01767 116 aa13.32□□□□□ -0.28
PDLIM7-204ENST00000393546 DERL1Q9BUN8 251 aa13.32□□□□□ -0.28
PDLIM7-204ENST00000393546 MUC4Q99102 2169 aa13.32□□□□□ -0.28
PDLIM7-204ENST00000393546 RYR3Q15413 4870 aa13.31□□□□□ -0.28
PDLIM7-204ENST00000393546 RYR2Q92736 4967 aa13.31□□□□□ -0.28
PDLIM7-204ENST00000393546 RBFOX3A6NFN3 312 aa13.31□□□□□ -0.28
PDLIM7-204ENST00000393546 M0R036 132 aa13.31□□□□□ -0.28
PDLIM7-204ENST00000393546 NUDT3O95989 172 aa13.31□□□□□ -0.28
PDLIM7-204ENST00000393546 ASIPP42127 132 aa13.31□□□□□ -0.28
PDLIM7-204ENST00000393546 SLAQ13239 276 aa13.31□□□□□ -0.28
PDLIM7-204ENST00000393546 C9orf85Q96MD7 179 aa13.31□□□□□ -0.28
PDLIM7-204ENST00000393546 A0A0J9YY99 117 aa13.3□□□□□ -0.28
PDLIM7-204ENST00000393546 C9JCJ5 164 aa13.3□□□□□ -0.28
PDLIM7-204ENST00000393546 RNASE3P12724 160 aaKnown RBP13.3□□□□□ -0.28
PDLIM7-204ENST00000393546 ZNF876PQ49A33 203 aa13.3□□□□□ -0.28
PDLIM7-204ENST00000393546 TEX261Q6UWH6 196 aa13.3□□□□□ -0.28
PDLIM7-204ENST00000393546 RAB19A4D1S5 217 aa13.29□□□□□ -0.28
PDLIM7-204ENST00000393546 H3BNG1 76 aa13.29□□□□□ -0.28
PDLIM7-204ENST00000393546 GNG4P50150 75 aa13.29□□□□□ -0.28
PDLIM7-204ENST00000393546 LINC01559Q495D7 138 aa13.29□□□□□ -0.28
PDLIM7-204ENST00000393546 CENPWQ5EE01 88 aa13.29□□□□□ -0.28
PDLIM7-204ENST00000393546 OR4C5Q8NGB2 326 aa13.29□□□□□ -0.28
PDLIM7-204ENST00000393546 PTH2Q96A98 100 aa13.29□□□□□ -0.28
PDLIM7-204ENST00000393546 VPS13DQ5THJ4 4388 aa13.28□□□□□ -0.28
PDLIM7-204ENST00000393546 TRAV4A0A0B4J268 109 aa13.28□□□□□ -0.28
PDLIM7-204ENST00000393546 TRGV4A0A0C4DH28 118 aa13.28□□□□□ -0.28
PDLIM7-204ENST00000393546 GRIFINA4D1Z8 144 aa13.28□□□□□ -0.28
PDLIM7-204ENST00000393546 FHL2Q14192 279 aa13.28□□□□□ -0.28
PDLIM7-204ENST00000393546 ZNF506Q5JVG8 444 aa13.28□□□□□ -0.28
PDLIM7-204ENST00000393546 DNLZQ5SXM8 178 aa13.28□□□□□ -0.28
PDLIM7-204ENST00000393546 PRR27Q6MZM9 219 aa13.28□□□□□ -0.28
PDLIM7-204ENST00000393546 UBE2DNLQ8IWF7 75 aa13.28□□□□□ -0.28
PDLIM7-204ENST00000393546 POM121L12Q8N7R1 296 aa13.28□□□□□ -0.28
PDLIM7-204ENST00000393546 ZNF479Q96JC4 524 aa13.28□□□□□ -0.28
PDLIM7-204ENST00000393546 IL36BQ9NZH7 164 aa13.28□□□□□ -0.28
PDLIM7-204ENST00000393546 PRO0255Q9UI72 69 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms