RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 KCNS1Q96KK3 526 aa14.63□□□□□ -0.07
CDCA4-202ENST00000392590 MANBALQ9NQG1 85 aa14.63□□□□□ -0.07
CDCA4-202ENST00000392590 GNRH2O43555 120 aa14.62□□□□□ -0.07
CDCA4-202ENST00000392590 AKR1C3P42330 323 aa14.62□□□□□ -0.07
CDCA4-202ENST00000392590 TMEM88Q6PEY1 159 aa14.62□□□□□ -0.07
CDCA4-202ENST00000392590 SDF2L1Q9HCN8 221 aa14.62□□□□□ -0.07
CDCA4-202ENST00000392590 ZFP30Q9Y2G7 519 aa14.62□□□□□ -0.07
CDCA4-202ENST00000392590 BOLA1Q9Y3E2 137 aa14.62□□□□□ -0.07
CDCA4-202ENST00000392590 TRGV2A0A075B6R0 118 aa14.61□□□□□ -0.07
CDCA4-202ENST00000392590 ALKAL2Q6UX46 152 aa14.61□□□□□ -0.07
CDCA4-202ENST00000392590 DYNC2H1Q8NCM8 4307 aaKnown RBP14.61□□□□□ -0.07
CDCA4-202ENST00000392590 PLECQ15149 4684 aaKnown RBP14.61□□□□□ -0.07
CDCA4-202ENST00000392590 TRBV6-1A0A0K0K1D8 114 aa14.61□□□□□ -0.07
CDCA4-202ENST00000392590 LGALS9BQ3B8N2 356 aa14.61□□□□□ -0.07
CDCA4-202ENST00000392590 MRPL16Q9NX20 251 aaKnown RBP14.61□□□□□ -0.07
CDCA4-202ENST00000392590 SCO2A0A1W2PP80 73 aa14.6□□□□□ -0.07
CDCA4-202ENST00000392590 SPXQ9BT56 116 aa14.6□□□□□ -0.07
CDCA4-202ENST00000392590 C11orf21Q9P2W6 132 aa14.6□□□□□ -0.07
CDCA4-202ENST00000392590 IGHV3-16A0A0C4DH30 117 aa14.59□□□□□ -0.07
CDCA4-202ENST00000392590 FABP5P3A8MUU1 101 aa14.59□□□□□ -0.07
CDCA4-202ENST00000392590 TYMSP04818 313 aa14.59□□□□□ -0.07
CDCA4-202ENST00000392590 S100A9P06702 114 aaKnown RBP14.59□□□□□ -0.07
CDCA4-202ENST00000392590 OR5I1Q13606 314 aa14.59□□□□□ -0.07
CDCA4-202ENST00000392590 C18orf15Q96N68 181 aa14.59□□□□□ -0.07
CDCA4-202ENST00000392590 LTAP01374 205 aa14.58□□□□□ -0.08
CDCA4-202ENST00000392590 COX8CQ7Z4L0 72 aa14.58□□□□□ -0.08
CDCA4-202ENST00000392590 IFNA1P01562 189 aa14.57□□□□□ -0.08
CDCA4-202ENST00000392590 ZC2HC1AQ96GY0 325 aa14.57□□□□□ -0.08
CDCA4-202ENST00000392590 TXNDC17Q9BRA2 123 aa14.57□□□□□ -0.08
CDCA4-202ENST00000392590 LYSTQ99698 3801 aa14.57□□□□□ -0.08
CDCA4-202ENST00000392590 BLOC1S1P78537 153 aa14.56□□□□□ -0.08
CDCA4-202ENST00000392590 HOXA5P20719 270 aa14.56□□□□□ -0.08
CDCA4-202ENST00000392590 CRIP1P50238 77 aa14.56□□□□□ -0.08
CDCA4-202ENST00000392590 C15orf53Q8NAA6 179 aa14.56□□□□□ -0.08
CDCA4-202ENST00000392590 MEF2BQ02080 365 aaPredicted RBP14.55□□□□□ -0.08
CDCA4-202ENST00000392590 FAM162BQ5T6X4 162 aa14.55□□□□□ -0.08
CDCA4-202ENST00000392590 RASL10AQ92737 203 aa14.55□□□□□ -0.08
CDCA4-202ENST00000392590 RYR3Q15413 4870 aa14.54□□□□□ -0.08
CDCA4-202ENST00000392590 M0R2P5 195 aa14.54□□□□□ -0.08
CDCA4-202ENST00000392590 P0DMU3 169 aa14.54□□□□□ -0.08
CDCA4-202ENST00000392590 FAM231AP0DMU4 169 aa14.54□□□□□ -0.08
CDCA4-202ENST00000392590 FAM231CP0DMU5 169 aa14.54□□□□□ -0.08
CDCA4-202ENST00000392590 BCL2P10415 239 aa14.54□□□□□ -0.08
CDCA4-202ENST00000392590 BAGE2Q86Y30 109 aa14.54□□□□□ -0.08
CDCA4-202ENST00000392590 TRAV26-1A0A087WT03 109 aa14.53□□□□□ -0.08
CDCA4-202ENST00000392590 IGKV3D-20A0A0C4DH25 116 aa14.53□□□□□ -0.08
CDCA4-202ENST00000392590 SH2D1AO60880 128 aa14.53□□□□□ -0.08
CDCA4-202ENST00000392590 IGHV3-53P01767 116 aa14.53□□□□□ -0.08
CDCA4-202ENST00000392590 ORM1P02763 201 aa14.53□□□□□ -0.08
CDCA4-202ENST00000392590 NHLRC2Q8NBF2 726 aa14.53□□□□□ -0.08
CDCA4-202ENST00000392590 C11orf52Q96A22 123 aa14.53□□□□□ -0.08
CDCA4-202ENST00000392590 VAX2Q9UIW0 290 aa14.53□□□□□ -0.08
CDCA4-202ENST00000392590 SACSQ9NZJ4 4579 aa14.52□□□□□ -0.08
CDCA4-202ENST00000392590 NUDT3O95989 172 aa14.52□□□□□ -0.08
CDCA4-202ENST00000392590 TAGLN2P37802 199 aaKnown RBP14.52□□□□□ -0.08
CDCA4-202ENST00000392590 RPL35P42766 123 aaKnown RBP14.52□□□□□ -0.08
CDCA4-202ENST00000392590 ZNF674Q2M3X9 581 aa14.52□□□□□ -0.08
CDCA4-202ENST00000392590 A0A0J9YY99 117 aa14.51□□□□□ -0.09
CDCA4-202ENST00000392590 PDE6DO43924 150 aa14.51□□□□□ -0.09
CDCA4-202ENST00000392590 B4DEV8 164 aa14.51□□□□□ -0.09
CDCA4-202ENST00000392590 S100A4P26447 101 aaKnown RBP14.51□□□□□ -0.09
CDCA4-202ENST00000392590 ALMS1Q8TCU4 4167 aa14.5□□□□□ -0.09
CDCA4-202ENST00000392590 RYR2Q92736 4967 aa14.5□□□□□ -0.09
CDCA4-202ENST00000392590 M0R036 132 aa14.5□□□□□ -0.09
CDCA4-202ENST00000392590 POM121L12Q8N7R1 296 aa14.5□□□□□ -0.09
CDCA4-202ENST00000392590 C9orf85Q96MD7 179 aa14.5□□□□□ -0.09
CDCA4-202ENST00000392590 DERL1Q9BUN8 251 aa14.5□□□□□ -0.09
CDCA4-202ENST00000392590 MLST8Q9BVC4 326 aa14.5□□□□□ -0.09
CDCA4-202ENST00000392590 MED9Q9NWA0 146 aa14.5□□□□□ -0.09
CDCA4-202ENST00000392590 KRBOX1C9JBD0 128 aa14.49□□□□□ -0.09
CDCA4-202ENST00000392590 C9JCJ5 164 aa14.49□□□□□ -0.09
CDCA4-202ENST00000392590 RNASE3P12724 160 aaKnown RBP14.49□□□□□ -0.09
CDCA4-202ENST00000392590 ASIPP42127 132 aa14.49□□□□□ -0.09
CDCA4-202ENST00000392590 ZNF876PQ49A33 203 aa14.49□□□□□ -0.09
CDCA4-202ENST00000392590 UBE2DNLQ8IWF7 75 aa14.49□□□□□ -0.09
CDCA4-202ENST00000392590 LYPD6BQ8NI32 183 aa14.49□□□□□ -0.09
CDCA4-202ENST00000392590 H3BNG1 76 aa14.48□□□□□ -0.09
CDCA4-202ENST00000392590 ZNF479Q96JC4 524 aa14.48□□□□□ -0.09
CDCA4-202ENST00000392590 TRGV4A0A0C4DH28 118 aa14.47□□□□□ -0.09
CDCA4-202ENST00000392590 SFTA3P0C7M3 94 aa14.47□□□□□ -0.09
CDCA4-202ENST00000392590 SLAQ13239 276 aa14.47□□□□□ -0.09
CDCA4-202ENST00000392590 FHL2Q14192 279 aa14.47□□□□□ -0.09
CDCA4-202ENST00000392590 OR4C5Q8NGB2 326 aa14.47□□□□□ -0.09
CDCA4-202ENST00000392590 VSIG2Q96IQ7 327 aa14.47□□□□□ -0.09
CDCA4-202ENST00000392590 HHLA3Q9XRX5 114 aa14.47□□□□□ -0.09
CDCA4-202ENST00000392590 TRAV4A0A0B4J268 109 aa14.46□□□□□ -0.09
CDCA4-202ENST00000392590 RBFOX3A6NFN3 312 aa14.46□□□□□ -0.09
CDCA4-202ENST00000392590 RNF212Q495C1 297 aa14.46□□□□□ -0.09
CDCA4-202ENST00000392590 LINC01559Q495D7 138 aa14.46□□□□□ -0.09
CDCA4-202ENST00000392590 CENPWQ5EE01 88 aa14.46□□□□□ -0.09
CDCA4-202ENST00000392590 PTH2Q96A98 100 aa14.46□□□□□ -0.09
CDCA4-202ENST00000392590 PRO0255Q9UI72 69 aa14.46□□□□□ -0.09
CDCA4-202ENST00000392590 TMSB15BA0A087X1C1 80 aa14.46□□□□□ -0.1
CDCA4-202ENST00000392590 RAB19A4D1S5 217 aa14.46□□□□□ -0.1
CDCA4-202ENST00000392590 GRIFINA4D1Z8 144 aa14.46□□□□□ -0.1
CDCA4-202ENST00000392590 PAX4O43316 350 aa14.46□□□□□ -0.1
CDCA4-202ENST00000392590 PRR27Q6MZM9 219 aa14.46□□□□□ -0.1
CDCA4-202ENST00000392590 DNAH1Q9P2D7 4330 aa14.45□□□□□ -0.1
CDCA4-202ENST00000392590 PGPEP1LA6NFU8 196 aa14.45□□□□□ -0.1
CDCA4-202ENST00000392590 DNLZQ5SXM8 178 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms