RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 NT5CQ8TCD5 201 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 SCGB1C1Q8TD33 95 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 CT55Q8WUE5 264 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 H1FXQ92522 213 aaKnown RBP1.67□□□□□ -2.14
PTPRC-205ENST00000391970 DPH3Q96FX2 82 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 C2orf50Q96LR7 162 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 SHANK2-AS3Q9BTD1 123 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 EIF5A2Q9GZV4 153 aaKnown RBP1.67□□□□□ -2.14
PTPRC-205ENST00000391970 CST11Q9H112 138 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 FBXL15Q9H469 300 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 NAA60Q9H7X0 242 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 SND1-IT1Q9HBX3 110 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 TVP23BQ9NYZ1 205 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 KLF13Q9Y2Y9 288 aaPredicted RBP1.67□□□□□ -2.14
PTPRC-205ENST00000391970 FIS1Q9Y3D6 152 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 ARL2-SNX15V9GYD0 113 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 ANAPC1Q9H1A4 1944 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 CHD8Q9HCK8 2581 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 MYO16Q9Y6X6 1858 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 SHROOM3Q8TF72 1996 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 HEATR5AQ86XA9 2040 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 TRAV4A0A0B4J268 109 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 LOC107984640A0A0U1RRK4 108 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 DAPL1A0PJW8 107 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 ZNF736B4DX44 427 aaPredicted RBP1.66□□□□□ -2.14
PTPRC-205ENST00000391970 C9JCJ5 164 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 H3BUT2 72 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 HCRTO43612 131 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 KLF7O75840 302 aaPredicted RBP1.66□□□□□ -2.14
PTPRC-205ENST00000391970 APOMO95445 188 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 CXCL8P10145 99 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 COX7CP15954 63 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 PSMB2P49721 201 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 UBE2D3P61077 147 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 UBE2G1P62253 170 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 UBE2D2P62837 147 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 ZNF117Q03924 483 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 ZNF90Q03938 601 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 PPP1R1AQ13522 171 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 C12orf74Q32Q52 190 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 ETDBQ3ZM63 59 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 FBXL19-AS1Q494R0 122 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 FAM201AQ5SY85 155 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 LYRM7Q5U5X0 104 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 NCBP2-AS2Q69YL0 99 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 TCF23Q7RTU1 214 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 ANKRD29Q8N6D5 301 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 CHCHD1Q96BP2 118 aaKnown RBP1.66□□□□□ -2.14
PTPRC-205ENST00000391970 PRELID3AQ96N28 172 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 AP1S3Q96PC3 154 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 UPK3BQ9BT76 320 aa1.66□□□□□ -2.14
PTPRC-205ENST00000391970 MRPL20Q9BYC9 149 aaKnown RBP1.66□□□□□ -2.14
PTPRC-205ENST00000391970 PTPRBP23467 1997 aa1.65□□□□□ -2.14
PTPRC-205ENST00000391970 COL4A6Q14031 1691 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 TRBV19A0A075B6N1 114 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 IGKV1D-17A0A075B6S4 117 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 TRAV12-2A0A075B6T6 113 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 TRAV26-2A0A0B4J265 109 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 FAM236DA0A1B0GTK5 79 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 EEF1E1-BLOC1S5C9J1V9 151 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 SNCGO76070 127 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 NDUFC2O95298 119 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 IGKV1-17P01599 117 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 IGKV1D-16P01601 117 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 GYPBP06028 91 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 FAM236CP0DP71 79 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 CTLA4P16410 223 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 HMGA1P17096 107 aaKnown RBP1.65□□□□□ -2.15
PTPRC-205ENST00000391970 CBLN1P23435 193 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 INSL3P51460 131 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 FOXA3P55318 350 aaPredicted RBP1.65□□□□□ -2.15
PTPRC-205ENST00000391970 ATP5EP56381 51 aaPredicted RBP1.65□□□□□ -2.15
PTPRC-205ENST00000391970 SMIM11AP58511 58 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 SUPT4H1P63272 117 aaKnown RBP1.65□□□□□ -2.15
PTPRC-205ENST00000391970 MRPS36P82909 103 aaKnown RBP1.65□□□□□ -2.15
PTPRC-205ENST00000391970 SERF2P84101 59 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 PMAIP1Q13794 54 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 WFDC2Q14508 124 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 Q56UQ5 140 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 NMSQ5H8A3 153 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 FAM104BQ5XKR9 115 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 EBLN2Q6P2I7 272 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 CLEC19AQ6UXS0 136 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 LYPD6Q86Y78 171 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 PDPNQ86YL7 162 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 BPIFA4PQ86YQ2 179 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 MED12LQ86YW9 2145 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 SGPP2Q8IWX5 399 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 OR5AS1Q8N127 324 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 LINC00337Q8N6G1 96 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 ZFP62Q8NB50 900 aaPredicted RBP1.65□□□□□ -2.15
PTPRC-205ENST00000391970 MORN4Q8NDC4 146 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 TSKUQ8WUA8 353 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 FGF13Q92913 245 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 CARD19Q96LW7 228 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 ODF3Q96PU9 254 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 SPACA5Q96QH8 159 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 PDCD1LG2Q9BQ51 273 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 PRSS27Q9BQR3 290 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 AGPAT4-IT1Q9H0P7 198 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms