RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 GAGE12BA1L429 117 aa10.65□□□□□ -0.7
IGHV3-53-201ENST00000390627 GAGE7O76087 117 aa10.65□□□□□ -0.7
IGHV3-53-201ENST00000390627 GAGE12FP0CL80 117 aa10.65□□□□□ -0.7
IGHV3-53-201ENST00000390627 GAGE12GP0CL81 117 aa10.65□□□□□ -0.7
IGHV3-53-201ENST00000390627 GAGE12IP0CL82 117 aa10.65□□□□□ -0.7
IGHV3-53-201ENST00000390627 TRGV1A0A0A0MS02 117 aa10.64□□□□□ -0.71
IGHV3-53-201ENST00000390627 SPINK4O60575 86 aa10.64□□□□□ -0.71
IGHV3-53-201ENST00000390627 LTAP01374 205 aa10.64□□□□□ -0.71
IGHV3-53-201ENST00000390627 BCL2P10415 239 aa10.64□□□□□ -0.71
IGHV3-53-201ENST00000390627 MEF2BQ02080 365 aaPredicted RBP10.64□□□□□ -0.71
IGHV3-53-201ENST00000390627 LGALS9BQ3B8N2 356 aa10.64□□□□□ -0.71
IGHV3-53-201ENST00000390627 Q6ZTI0 123 aa10.64□□□□□ -0.71
IGHV3-53-201ENST00000390627 COX8CQ7Z4L0 72 aa10.64□□□□□ -0.71
IGHV3-53-201ENST00000390627 C11orf52Q96A22 123 aa10.64□□□□□ -0.71
IGHV3-53-201ENST00000390627 NDUFAF3Q9BU61 184 aa10.64□□□□□ -0.71
IGHV3-53-201ENST00000390627 ALMS1Q8TCU4 4167 aa10.64□□□□□ -0.71
IGHV3-53-201ENST00000390627 TRGV2A0A075B6R0 118 aa10.63□□□□□ -0.71
IGHV3-53-201ENST00000390627 FABP5P3A8MUU1 101 aa10.63□□□□□ -0.71
IGHV3-53-201ENST00000390627 F5H768 121 aa10.63□□□□□ -0.71
IGHV3-53-201ENST00000390627 PDE6DO43924 150 aa10.63□□□□□ -0.71
IGHV3-53-201ENST00000390627 TYMSP04818 313 aa10.63□□□□□ -0.71
IGHV3-53-201ENST00000390627 C18orf15Q96N68 181 aa10.63□□□□□ -0.71
IGHV3-53-201ENST00000390627 SPXQ9BT56 116 aa10.63□□□□□ -0.71
IGHV3-53-201ENST00000390627 MDFICQ9P1T7 246 aa10.63□□□□□ -0.71
IGHV3-53-201ENST00000390627 VAX2Q9UIW0 290 aa10.63□□□□□ -0.71
IGHV3-53-201ENST00000390627 APLNQ9ULZ1 77 aa10.63□□□□□ -0.71
IGHV3-53-201ENST00000390627 SACSQ9NZJ4 4579 aa10.62□□□□□ -0.71
IGHV3-53-201ENST00000390627 IGHV3-16A0A0C4DH30 117 aa10.62□□□□□ -0.71
IGHV3-53-201ENST00000390627 GNRH2O43555 120 aa10.62□□□□□ -0.71
IGHV3-53-201ENST00000390627 FAM162BQ5T6X4 162 aa10.62□□□□□ -0.71
IGHV3-53-201ENST00000390627 LINC00476Q8WZB0 136 aa10.62□□□□□ -0.71
IGHV3-53-201ENST00000390627 ZC2HC1AQ96GY0 325 aa10.62□□□□□ -0.71
IGHV3-53-201ENST00000390627 RPL35P42766 123 aaKnown RBP10.61□□□□□ -0.71
IGHV3-53-201ENST00000390627 TMEM88Q6PEY1 159 aa10.61□□□□□ -0.71
IGHV3-53-201ENST00000390627 BAGE2Q86Y30 109 aa10.61□□□□□ -0.71
IGHV3-53-201ENST00000390627 LYPD6BQ8NI32 183 aa10.61□□□□□ -0.71
IGHV3-53-201ENST00000390627 MRPL16Q9NX20 251 aaKnown RBP10.61□□□□□ -0.71
IGHV3-53-201ENST00000390627 C11orf21Q9P2W6 132 aa10.61□□□□□ -0.71
IGHV3-53-201ENST00000390627 LYSTQ99698 3801 aa10.61□□□□□ -0.71
IGHV3-53-201ENST00000390627 DNAH1Q9P2D7 4330 aa10.6□□□□□ -0.71
IGHV3-53-201ENST00000390627 LY6G6CO95867 125 aa10.6□□□□□ -0.71
IGHV3-53-201ENST00000390627 C15orf53Q8NAA6 179 aa10.6□□□□□ -0.71
IGHV3-53-201ENST00000390627 M0R2P5 195 aa10.59□□□□□ -0.71
IGHV3-53-201ENST00000390627 SH2D1AO60880 128 aa10.59□□□□□ -0.71
IGHV3-53-201ENST00000390627 ORM1P02763 201 aa10.59□□□□□ -0.71
IGHV3-53-201ENST00000390627 ZNF674Q2M3X9 581 aa10.59□□□□□ -0.71
IGHV3-53-201ENST00000390627 LGALS9CQ6DKI2 356 aa10.59□□□□□ -0.71
IGHV3-53-201ENST00000390627 NHLRC2Q8NBF2 726 aa10.59□□□□□ -0.71
IGHV3-53-201ENST00000390627 TENM2Q9NT68 2774 aa10.58□□□□□ -0.72
IGHV3-53-201ENST00000390627 IGKV3D-20A0A0C4DH25 116 aa10.58□□□□□ -0.72
IGHV3-53-201ENST00000390627 B4DEV8 164 aa10.58□□□□□ -0.72
IGHV3-53-201ENST00000390627 S100A4P26447 101 aaKnown RBP10.58□□□□□ -0.72
IGHV3-53-201ENST00000390627 CRIP1P50238 77 aa10.58□□□□□ -0.72
IGHV3-53-201ENST00000390627 OR5I1Q13606 314 aa10.58□□□□□ -0.72
IGHV3-53-201ENST00000390627 TEX261Q6UWH6 196 aa10.58□□□□□ -0.72
IGHV3-53-201ENST00000390627 RASL10AQ92737 203 aa10.58□□□□□ -0.72
IGHV3-53-201ENST00000390627 DERL1Q9BUN8 251 aa10.58□□□□□ -0.72
IGHV3-53-201ENST00000390627 MLST8Q9BVC4 326 aa10.58□□□□□ -0.72
IGHV3-53-201ENST00000390627 MED9Q9NWA0 146 aa10.58□□□□□ -0.72
IGHV3-53-201ENST00000390627 RBFOX3A6NFN3 312 aa10.57□□□□□ -0.72
IGHV3-53-201ENST00000390627 ASIPP42127 132 aa10.57□□□□□ -0.72
IGHV3-53-201ENST00000390627 CENPWQ5EE01 88 aa10.57□□□□□ -0.72
IGHV3-53-201ENST00000390627 SMIM12Q96EX1 92 aa10.57□□□□□ -0.72
IGHV3-53-201ENST00000390627 C9orf85Q96MD7 179 aa10.57□□□□□ -0.72
IGHV3-53-201ENST00000390627 KRBOX1C9JBD0 128 aa10.56□□□□□ -0.72
IGHV3-53-201ENST00000390627 M0R036 132 aa10.56□□□□□ -0.72
IGHV3-53-201ENST00000390627 P0DMU3 169 aa10.56□□□□□ -0.72
IGHV3-53-201ENST00000390627 FAM231AP0DMU4 169 aa10.56□□□□□ -0.72
IGHV3-53-201ENST00000390627 FAM231CP0DMU5 169 aa10.56□□□□□ -0.72
IGHV3-53-201ENST00000390627 HOXA5P20719 270 aa10.56□□□□□ -0.72
IGHV3-53-201ENST00000390627 GNG4P50150 75 aa10.56□□□□□ -0.72
IGHV3-53-201ENST00000390627 LINC01559Q495D7 138 aa10.56□□□□□ -0.72
IGHV3-53-201ENST00000390627 ZNF506Q5JVG8 444 aa10.56□□□□□ -0.72
IGHV3-53-201ENST00000390627 IGHV3-53P01767 116 aa10.55□□□□□ -0.72
IGHV3-53-201ENST00000390627 RNASE3P12724 160 aaKnown RBP10.55□□□□□ -0.72
IGHV3-53-201ENST00000390627 PRR27Q6MZM9 219 aa10.55□□□□□ -0.72
IGHV3-53-201ENST00000390627 TRAV26-1A0A087WT03 109 aa10.54□□□□□ -0.72
IGHV3-53-201ENST00000390627 TRAV4A0A0B4J268 109 aa10.54□□□□□ -0.72
IGHV3-53-201ENST00000390627 TMEM250H0YL14 139 aa10.54□□□□□ -0.72
IGHV3-53-201ENST00000390627 H3BNG1 76 aa10.54□□□□□ -0.72
IGHV3-53-201ENST00000390627 SLAQ13239 276 aa10.54□□□□□ -0.72
IGHV3-53-201ENST00000390627 ZNF876PQ49A33 203 aa10.54□□□□□ -0.72
IGHV3-53-201ENST00000390627 TOR2AQ5JU69 321 aa10.54□□□□□ -0.72
IGHV3-53-201ENST00000390627 DNLZQ5SXM8 178 aa10.54□□□□□ -0.72
IGHV3-53-201ENST00000390627 PTH2Q96A98 100 aa10.54□□□□□ -0.72
IGHV3-53-201ENST00000390627 FAM210AQ96ND0 272 aa10.54□□□□□ -0.72
IGHV3-53-201ENST00000390627 MUC4Q99102 2169 aa10.54□□□□□ -0.72
IGHV3-53-201ENST00000390627 EIF5A2Q9GZV4 153 aaKnown RBP10.54□□□□□ -0.72
IGHV3-53-201ENST00000390627 BIN3Q9NQY0 253 aa10.54□□□□□ -0.72
IGHV3-53-201ENST00000390627 IL36BQ9NZH7 164 aa10.54□□□□□ -0.72
IGHV3-53-201ENST00000390627 A0A0J9YY99 117 aa10.53□□□□□ -0.72
IGHV3-53-201ENST00000390627 RAB19A4D1S5 217 aa10.53□□□□□ -0.72
IGHV3-53-201ENST00000390627 C9JCJ5 164 aa10.53□□□□□ -0.72
IGHV3-53-201ENST00000390627 NDUFS6O75380 124 aaKnown RBP10.53□□□□□ -0.72
IGHV3-53-201ENST00000390627 NUDT3O95989 172 aa10.53□□□□□ -0.72
IGHV3-53-201ENST00000390627 MGST1P10620 155 aaKnown RBP10.53□□□□□ -0.72
IGHV3-53-201ENST00000390627 OR4C5Q8NGB2 326 aa10.53□□□□□ -0.72
IGHV3-53-201ENST00000390627 TMSB15BA0A087X1C1 80 aa10.52□□□□□ -0.73
IGHV3-53-201ENST00000390627 TRGV4A0A0C4DH28 118 aa10.52□□□□□ -0.73
IGHV3-53-201ENST00000390627 GRIFINA4D1Z8 144 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms