RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 TRAV21A0A0B4J279 112 aa11.34□□□□□ -0.59
SCFD2-201ENST00000388940 GATA1P15976 413 aaPredicted RBP11.34□□□□□ -0.59
SCFD2-201ENST00000388940 PSMG4Q5JS54 123 aa11.34□□□□□ -0.59
SCFD2-201ENST00000388940 Q6ZQT7 251 aa11.34□□□□□ -0.59
SCFD2-201ENST00000388940 Q6ZS46 218 aa11.34□□□□□ -0.59
SCFD2-201ENST00000388940 APRG1Q8IVJ8 170 aa11.34□□□□□ -0.59
SCFD2-201ENST00000388940 NRACQ8N912 160 aa11.34□□□□□ -0.59
SCFD2-201ENST00000388940 G3V4G9 280 aa11.33□□□□□ -0.59
SCFD2-201ENST00000388940 AVPP01185 164 aa11.33□□□□□ -0.59
SCFD2-201ENST00000388940 RIPPLY3P57055 190 aa11.33□□□□□ -0.59
SCFD2-201ENST00000388940 SPANXN1Q5VSR9 72 aa11.33□□□□□ -0.59
SCFD2-201ENST00000388940 PKD1L2Q7Z442 2459 aa11.33□□□□□ -0.6
SCFD2-201ENST00000388940 CACNA1AO00555 2505 aa11.33□□□□□ -0.6
SCFD2-201ENST00000388940 K7EMT4 169 aa11.33□□□□□ -0.6
SCFD2-201ENST00000388940 BOD1L2Q8IYS8 172 aa11.33□□□□□ -0.6
SCFD2-201ENST00000388940 ZMAT4Q9H898 229 aa11.33□□□□□ -0.6
SCFD2-201ENST00000388940 MED14OSP0DP75 135 aa11.32□□□□□ -0.6
SCFD2-201ENST00000388940 TMEM95Q3KNT9 176 aa11.32□□□□□ -0.6
SCFD2-201ENST00000388940 MRAP2Q96G30 205 aa11.32□□□□□ -0.6
SCFD2-201ENST00000388940 RHPN1-AS1Q9BWJ2 59 aa11.32□□□□□ -0.6
SCFD2-201ENST00000388940 DAZ1Q9NQZ3 744 aaKnown RBP11.32□□□□□ -0.6
SCFD2-201ENST00000388940 A0A1B0GV72 72 aa11.32□□□□□ -0.6
SCFD2-201ENST00000388940 SLC25A16P16260 332 aa11.32□□□□□ -0.6
SCFD2-201ENST00000388940 SAMD13Q5VXD3 122 aa11.32□□□□□ -0.6
SCFD2-201ENST00000388940 H3BVH4 76 aa11.31□□□□□ -0.6
SCFD2-201ENST00000388940 SIVA1O15304 175 aa11.31□□□□□ -0.6
SCFD2-201ENST00000388940 CD5LO43866 347 aa11.31□□□□□ -0.6
SCFD2-201ENST00000388940 SVEP1Q4LDE5 3571 aa11.31□□□□□ -0.6
SCFD2-201ENST00000388940 AMMECR1LQ6DCA0 310 aa11.31□□□□□ -0.6
SCFD2-201ENST00000388940 TMEM158Q8WZ71 300 aa11.31□□□□□ -0.6
SCFD2-201ENST00000388940 PEF1Q9UBV8 284 aaKnown RBP11.31□□□□□ -0.6
SCFD2-201ENST00000388940 UFC1Q9Y3C8 167 aa11.31□□□□□ -0.6
SCFD2-201ENST00000388940 ODF1Q14990 250 aa11.3□□□□□ -0.6
SCFD2-201ENST00000388940 TM4SF20Q53R12 229 aa11.3□□□□□ -0.6
SCFD2-201ENST00000388940 OR9G4Q8NGQ1 327 aa11.3□□□□□ -0.6
SCFD2-201ENST00000388940 DKK2Q9UBU2 259 aa11.3□□□□□ -0.6
SCFD2-201ENST00000388940 SPTAN1Q13813 2472 aaKnown RBP11.3□□□□□ -0.6
SCFD2-201ENST00000388940 TMEM89A2RUT3 159 aa11.29□□□□□ -0.6
SCFD2-201ENST00000388940 ATP5LO75964 103 aa11.29□□□□□ -0.6
SCFD2-201ENST00000388940 LAGE3Q14657 143 aa11.29□□□□□ -0.6
SCFD2-201ENST00000388940 C18orf15Q96N68 181 aa11.29□□□□□ -0.6
SCFD2-201ENST00000388940 ASIPP42127 132 aa11.29□□□□□ -0.6
SCFD2-201ENST00000388940 RPL11P62913 178 aaKnown RBP11.29□□□□□ -0.6
SCFD2-201ENST00000388940 LCNL1Q6ZST4 164 aa11.29□□□□□ -0.6
SCFD2-201ENST00000388940 WFDC3Q8IUB2 231 aa11.29□□□□□ -0.6
SCFD2-201ENST00000388940 LINC01356Q8N9X3 169 aa11.29□□□□□ -0.6
SCFD2-201ENST00000388940 SMIM17P0DL12 118 aa11.28□□□□□ -0.6
SCFD2-201ENST00000388940 PSMB8P28062 276 aa11.28□□□□□ -0.6
SCFD2-201ENST00000388940 SEC11AP67812 179 aa11.28□□□□□ -0.6
SCFD2-201ENST00000388940 SCGB2A2Q13296 93 aa11.28□□□□□ -0.6
SCFD2-201ENST00000388940 KIR3DS1Q14943 382 aa11.28□□□□□ -0.6
SCFD2-201ENST00000388940 TMEM97Q5BJF2 176 aa11.28□□□□□ -0.6
SCFD2-201ENST00000388940 DOPEY1Q5JWR5 2465 aa11.28□□□□□ -0.6
SCFD2-201ENST00000388940 TRAV26-2A0A0B4J265 109 aa11.28□□□□□ -0.6
SCFD2-201ENST00000388940 J3QLI3 93 aa11.28□□□□□ -0.6
SCFD2-201ENST00000388940 SRSF1Q07955 248 aaKnown RBP eCLIP11.28□□□□□ -0.6
SCFD2-201ENST00000388940 ANXA2RQ3ZCQ2 193 aa11.28□□□□□ -0.6
SCFD2-201ENST00000388940 WFDC12Q8WWY7 111 aa11.28□□□□□ -0.6
SCFD2-201ENST00000388940 HHLA3Q9XRX5 114 aa11.28□□□□□ -0.6
SCFD2-201ENST00000388940 A0A096LNT2 108 aa11.27□□□□□ -0.61
SCFD2-201ENST00000388940 PRSS1P07477 247 aa11.27□□□□□ -0.61
SCFD2-201ENST00000388940 RNASE4P34096 147 aaKnown RBP11.27□□□□□ -0.61
SCFD2-201ENST00000388940 DEFB1P60022 68 aa11.27□□□□□ -0.61
SCFD2-201ENST00000388940 DPH3P1Q9H4G8 78 aa11.27□□□□□ -0.61
SCFD2-201ENST00000388940 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.27□□□□□ -0.61
SCFD2-201ENST00000388940 J3KRW8 73 aa11.27□□□□□ -0.61
SCFD2-201ENST00000388940 SAP30O75446 220 aa11.27□□□□□ -0.61
SCFD2-201ENST00000388940 S100A4P26447 101 aaKnown RBP11.27□□□□□ -0.61
SCFD2-201ENST00000388940 ID1P41134 155 aa11.27□□□□□ -0.61
SCFD2-201ENST00000388940 DEFB112Q30KQ8 113 aa11.27□□□□□ -0.61
SCFD2-201ENST00000388940 A1L4Q6 167 aa11.26□□□□□ -0.61
SCFD2-201ENST00000388940 F6UB75 175 aa11.26□□□□□ -0.61
SCFD2-201ENST00000388940 MYOZ3Q8TDC0 251 aa11.26□□□□□ -0.61
SCFD2-201ENST00000388940 C20orf78Q9BR46 151 aa11.26□□□□□ -0.61
SCFD2-201ENST00000388940 SMIM2Q9BVW6 85 aa11.26□□□□□ -0.61
SCFD2-201ENST00000388940 KLLNB2CW77 178 aa11.25□□□□□ -0.61
SCFD2-201ENST00000388940 K7EMI3 77 aa11.25□□□□□ -0.61
SCFD2-201ENST00000388940 M0R381 172 aa11.25□□□□□ -0.61
SCFD2-201ENST00000388940 IGHV4-59P01825 116 aa11.25□□□□□ -0.61
SCFD2-201ENST00000388940 IGKCP01834 107 aa11.25□□□□□ -0.61
SCFD2-201ENST00000388940 DCANP1Q8TF63 244 aa11.25□□□□□ -0.61
SCFD2-201ENST00000388940 PHLDA3Q9Y5J5 127 aa11.25□□□□□ -0.61
SCFD2-201ENST00000388940 ZFHX3Q15911 3703 aa11.25□□□□□ -0.61
SCFD2-201ENST00000388940 HSD52Q0P140 79 aa11.25□□□□□ -0.61
SCFD2-201ENST00000388940 Q5PR19 223 aa11.25□□□□□ -0.61
SCFD2-201ENST00000388940 GTF2H5Q6ZYL4 71 aa11.25□□□□□ -0.61
SCFD2-201ENST00000388940 POM121L12Q8N7R1 296 aa11.25□□□□□ -0.61
SCFD2-201ENST00000388940 NRGNQ92686 78 aa11.25□□□□□ -0.61
SCFD2-201ENST00000388940 FOXC2Q99958 501 aa11.25□□□□□ -0.61
SCFD2-201ENST00000388940 DPM2O94777 84 aa11.24□□□□□ -0.61
SCFD2-201ENST00000388940 NXPH4O95158 308 aa11.24□□□□□ -0.61
SCFD2-201ENST00000388940 ADAMTSL5Q6ZMM2 481 aa11.24□□□□□ -0.61
SCFD2-201ENST00000388940 RASL10AQ92737 203 aa11.24□□□□□ -0.61
SCFD2-201ENST00000388940 IGKV3-7A0A075B6H7 116 aa11.24□□□□□ -0.61
SCFD2-201ENST00000388940 RNASE3P12724 160 aaKnown RBP11.24□□□□□ -0.61
SCFD2-201ENST00000388940 PCP2Q8IVA1 136 aa11.24□□□□□ -0.61
SCFD2-201ENST00000388940 CFAP46Q8IYW2 2715 aa11.24□□□□□ -0.61
SCFD2-201ENST00000388940 GNRH2O43555 120 aa11.23□□□□□ -0.61
SCFD2-201ENST00000388940 NMUP48645 174 aa11.23□□□□□ -0.61
SCFD2-201ENST00000388940 SUMO2P61956 95 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms