RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 XIRP1Q702N8 1843 aaKnown RBP8.59□□□□□ -1.03
CLCN4-202ENST00000380833 BUB1B-PAK6H3BSN5 160 aa8.59□□□□□ -1.03
CLCN4-202ENST00000380833 TCL1BO95988 128 aa8.59□□□□□ -1.03
CLCN4-202ENST00000380833 E7EQL1 145 aa8.59□□□□□ -1.03
CLCN4-202ENST00000380833 MLST8Q9BVC4 326 aa8.59□□□□□ -1.03
CLCN4-202ENST00000380833 PROP1O75360 226 aa8.59□□□□□ -1.03
CLCN4-202ENST00000380833 RNF138Q8WVD3 245 aa8.59□□□□□ -1.03
CLCN4-202ENST00000380833 TRGV9Q99603 122 aa8.59□□□□□ -1.03
CLCN4-202ENST00000380833 LGALS9O00182 355 aa8.59□□□□□ -1.03
CLCN4-202ENST00000380833 ANGP03950 147 aaKnown RBP8.59□□□□□ -1.03
CLCN4-202ENST00000380833 PRORYQ9H606 182 aa8.59□□□□□ -1.03
CLCN4-202ENST00000380833 GTF3C1Q12789 2109 aa8.58□□□□□ -1.04
CLCN4-202ENST00000380833 SDK2Q58EX2 2172 aa8.58□□□□□ -1.04
CLCN4-202ENST00000380833 DOCK6Q96HP0 2047 aa8.58□□□□□ -1.04
CLCN4-202ENST00000380833 IGHV4-28A0A0C4DH34 117 aa8.58□□□□□ -1.04
CLCN4-202ENST00000380833 H0YGX0 51 aa8.58□□□□□ -1.04
CLCN4-202ENST00000380833 ATP6V0E1O15342 81 aa8.58□□□□□ -1.04
CLCN4-202ENST00000380833 IGLV3-21P80748 117 aaPredicted RBP8.58□□□□□ -1.04
CLCN4-202ENST00000380833 E9PLD3 99 aa8.58□□□□□ -1.04
CLCN4-202ENST00000380833 JMJD7-PLA2G4BH0Y9G9 81 aa8.58□□□□□ -1.04
CLCN4-202ENST00000380833 PPDPFQ9H3Y8 114 aa8.58□□□□□ -1.04
CLCN4-202ENST00000380833 DOCK3Q8IZD9 2030 aa8.58□□□□□ -1.04
CLCN4-202ENST00000380833 TRAV26-2A0A0B4J265 109 aa8.58□□□□□ -1.04
CLCN4-202ENST00000380833 ATP5EP2Q5VTU8 51 aa8.58□□□□□ -1.04
CLCN4-202ENST00000380833 ZNF581Q9P0T4 197 aa8.58□□□□□ -1.04
CLCN4-202ENST00000380833 FAM186AA6NE01 2351 aa8.58□□□□□ -1.04
CLCN4-202ENST00000380833 SPTBN1Q01082 2364 aaKnown RBP8.58□□□□□ -1.04
CLCN4-202ENST00000380833 H3BQ85 93 aa8.58□□□□□ -1.04
CLCN4-202ENST00000380833 LRCOL1A6NCL2 159 aa8.57□□□□□ -1.04
CLCN4-202ENST00000380833 OOSP1A8MZH6 123 aa8.57□□□□□ -1.04
CLCN4-202ENST00000380833 CACNA1EQ15878 2313 aa8.57□□□□□ -1.04
CLCN4-202ENST00000380833 C5orf63A6NC05 138 aa8.57□□□□□ -1.04
CLCN4-202ENST00000380833 XGP55808 180 aa8.57□□□□□ -1.04
CLCN4-202ENST00000380833 ZFP36L1Q07352 338 aaKnown RBP8.57□□□□□ -1.04
CLCN4-202ENST00000380833 SDIM1Q6ZPB5 146 aa8.57□□□□□ -1.04
CLCN4-202ENST00000380833 C8orf49Q96NF6 230 aa8.57□□□□□ -1.04
CLCN4-202ENST00000380833 AGPAT4-IT1Q9H0P7 198 aa8.57□□□□□ -1.04
CLCN4-202ENST00000380833 MPDZO75970 2070 aa8.57□□□□□ -1.04
CLCN4-202ENST00000380833 TRAV4A0A0B4J268 109 aa8.57□□□□□ -1.04
CLCN4-202ENST00000380833 J3QLI3 93 aa8.57□□□□□ -1.04
CLCN4-202ENST00000380833 PIFOQ8TCI5 191 aa8.57□□□□□ -1.04
CLCN4-202ENST00000380833 C11orf52Q96A22 123 aa8.57□□□□□ -1.04
CLCN4-202ENST00000380833 TRBV7-1A0A0A6YYK4 115 aa8.57□□□□□ -1.04
CLCN4-202ENST00000380833 DEFB4AO15263 64 aa8.57□□□□□ -1.04
CLCN4-202ENST00000380833 WISP1O95388 367 aa8.57□□□□□ -1.04
CLCN4-202ENST00000380833 ZNRF2Q8NHG8 242 aa8.57□□□□□ -1.04
CLCN4-202ENST00000380833 HEATR1Q9H583 2144 aaKnown RBP8.57□□□□□ -1.04
CLCN4-202ENST00000380833 RHOHQ15669 191 aa8.57□□□□□ -1.04
CLCN4-202ENST00000380833 GAFA1Q96PS6 74 aa8.57□□□□□ -1.04
CLCN4-202ENST00000380833 VOPP1Q96AW1 172 aa8.56□□□□□ -1.04
CLCN4-202ENST00000380833 IGKV1-9A0A0C4DH69 117 aa8.56□□□□□ -1.04
CLCN4-202ENST00000380833 LINC00173Q6ZV60 143 aa8.56□□□□□ -1.04
CLCN4-202ENST00000380833 C15orf62A8K5M9 175 aa8.56□□□□□ -1.04
CLCN4-202ENST00000380833 FAM120AOSQ5T036 256 aa8.56□□□□□ -1.04
CLCN4-202ENST00000380833 GTSF1Q8WW33 167 aa8.56□□□□□ -1.04
CLCN4-202ENST00000380833 SPRY2O43597 315 aa8.56□□□□□ -1.04
CLCN4-202ENST00000380833 COL5A3P25940 1745 aaPredicted RBP8.56□□□□□ -1.04
CLCN4-202ENST00000380833 IGHV3-30P01768 117 aa8.56□□□□□ -1.04
CLCN4-202ENST00000380833 IGHV3-33P01772 117 aa8.56□□□□□ -1.04
CLCN4-202ENST00000380833 IGHV3-30-3P0DP02 117 aa8.56□□□□□ -1.04
CLCN4-202ENST00000380833 IGHV3-30-5P0DP03 117 aa8.56□□□□□ -1.04
CLCN4-202ENST00000380833 EIF4EBP2Q13542 120 aaPredicted RBP8.55□□□□□ -1.04
CLCN4-202ENST00000380833 NCOR1O75376 2440 aa8.55□□□□□ -1.04
CLCN4-202ENST00000380833 CMC4P56277 68 aaPredicted RBP8.55□□□□□ -1.04
CLCN4-202ENST00000380833 SMIM2Q9BVW6 85 aa8.55□□□□□ -1.04
CLCN4-202ENST00000380833 COL24A1Q17RW2 1714 aa8.55□□□□□ -1.04
CLCN4-202ENST00000380833 TEX49A0A1B0GTD5 131 aa8.55□□□□□ -1.04
CLCN4-202ENST00000380833 GGNQ86UU5 652 aa8.55□□□□□ -1.04
CLCN4-202ENST00000380833 I3L3M4 83 aa8.55□□□□□ -1.04
CLCN4-202ENST00000380833 IGLV10-54A0A075B6I4 117 aa8.54□□□□□ -1.04
CLCN4-202ENST00000380833 HIST2H2BCQ6DN03 193 aa8.54□□□□□ -1.04
CLCN4-202ENST00000380833 HIST2H2BDQ6DRA6 164 aa8.54□□□□□ -1.04
CLCN4-202ENST00000380833 TMEM61Q8N0U2 210 aa8.54□□□□□ -1.04
CLCN4-202ENST00000380833 LAMB2P55268 1798 aa8.54□□□□□ -1.04
CLCN4-202ENST00000380833 ANKRD36A6QL64 1941 aa8.54□□□□□ -1.04
CLCN4-202ENST00000380833 COL11A2P13942 1736 aaPredicted RBP8.54□□□□□ -1.04
CLCN4-202ENST00000380833 XCL1P47992 114 aa8.54□□□□□ -1.04
CLCN4-202ENST00000380833 APOC4P55056 127 aa8.54□□□□□ -1.04
CLCN4-202ENST00000380833 IGKV1-12A0A0C4DH73 117 aa8.54□□□□□ -1.04
CLCN4-202ENST00000380833 IGKV1D-12P01611 117 aa8.54□□□□□ -1.04
CLCN4-202ENST00000380833 DAZ1Q9NQZ3 744 aaKnown RBP8.54□□□□□ -1.04
CLCN4-202ENST00000380833 LTAP01374 205 aa8.54□□□□□ -1.04
CLCN4-202ENST00000380833 LINC00526Q96FQ7 95 aa8.54□□□□□ -1.04
CLCN4-202ENST00000380833 CLEC2BQ92478 149 aa8.54□□□□□ -1.04
CLCN4-202ENST00000380833 DOCK9Q9BZ29 2069 aa8.54□□□□□ -1.04
CLCN4-202ENST00000380833 NOP10Q9NPE3 64 aaKnown RBP8.53□□□□□ -1.04
CLCN4-202ENST00000380833 DTX1Q86Y01 620 aa8.53□□□□□ -1.04
CLCN4-202ENST00000380833 NDUFA11Q86Y39 141 aa8.53□□□□□ -1.04
CLCN4-202ENST00000380833 APRG1Q8IVJ8 170 aa8.53□□□□□ -1.04
CLCN4-202ENST00000380833 DYNAPQ8N1N2 210 aa8.53□□□□□ -1.04
CLCN4-202ENST00000380833 ARFGEF1Q9Y6D6 1849 aa8.53□□□□□ -1.04
CLCN4-202ENST00000380833 IGKV1-16P04430 117 aa8.53□□□□□ -1.04
CLCN4-202ENST00000380833 NREPQ16612 68 aa8.53□□□□□ -1.04
CLCN4-202ENST00000380833 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.53□□□□□ -1.04
CLCN4-202ENST00000380833 IGKV1-27A0A075B6S5 117 aa8.53□□□□□ -1.04
CLCN4-202ENST00000380833 LINC00114Q6XXX2 140 aa8.52□□□□□ -1.05
CLCN4-202ENST00000380833 TAF1LQ8IZX4 1826 aa8.52□□□□□ -1.05
CLCN4-202ENST00000380833 DENND4AQ7Z401 1863 aa8.52□□□□□ -1.05
CLCN4-202ENST00000380833 LOC107984640A0A0U1RRK4 108 aa8.52□□□□□ -1.05
CLCN4-202ENST00000380833 GATA1P15976 413 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms