RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 NDFIP1Q9BT67 221 aa13.2□□□□□ -0.3
TMEM88B-201ENST00000378821 H2AFB1P0C5Y9 115 aa13.19□□□□□ -0.3
TMEM88B-201ENST00000378821 TCL1AP56279 114 aa13.19□□□□□ -0.3
TMEM88B-201ENST00000378821 IBA57Q5T440 356 aaKnown RBP13.19□□□□□ -0.3
TMEM88B-201ENST00000378821 EIF5AL1Q6IS14 154 aaKnown RBP13.19□□□□□ -0.3
TMEM88B-201ENST00000378821 KLF12Q9Y4X4 402 aa13.19□□□□□ -0.3
TMEM88B-201ENST00000378821 ARL2-SNX15V9GYD0 113 aa13.19□□□□□ -0.3
TMEM88B-201ENST00000378821 TRAV21A0A0B4J279 112 aa13.18□□□□□ -0.3
TMEM88B-201ENST00000378821 GAGE12BA1L429 117 aa13.18□□□□□ -0.3
TMEM88B-201ENST00000378821 PAGE4O60829 102 aa13.18□□□□□ -0.3
TMEM88B-201ENST00000378821 GAGE7O76087 117 aa13.18□□□□□ -0.3
TMEM88B-201ENST00000378821 GAGE12FP0CL80 117 aa13.18□□□□□ -0.3
TMEM88B-201ENST00000378821 GAGE12GP0CL81 117 aa13.18□□□□□ -0.3
TMEM88B-201ENST00000378821 GAGE12IP0CL82 117 aa13.18□□□□□ -0.3
TMEM88B-201ENST00000378821 SULT1A2P50226 295 aa13.18□□□□□ -0.3
TMEM88B-201ENST00000378821 ZNF80P51504 273 aaPredicted RBP13.18□□□□□ -0.3
TMEM88B-201ENST00000378821 SOHLH1Q5JUK2 328 aa13.18□□□□□ -0.3
TMEM88B-201ENST00000378821 C1orf134Q5TEV5 83 aa13.18□□□□□ -0.3
TMEM88B-201ENST00000378821 CST9LP1Q5W188 147 aa13.18□□□□□ -0.3
TMEM88B-201ENST00000378821 Q6ZTI0 123 aa13.18□□□□□ -0.3
TMEM88B-201ENST00000378821 HIST1H2BAQ96A08 127 aa13.18□□□□□ -0.3
TMEM88B-201ENST00000378821 NAGKQ9UJ70 344 aa13.18□□□□□ -0.3
TMEM88B-201ENST00000378821 FBLL1A6NHQ2 334 aaKnown RBP13.17□□□□□ -0.3
TMEM88B-201ENST00000378821 RAB5CP51148 216 aa13.17□□□□□ -0.3
TMEM88B-201ENST00000378821 Q86TA4 180 aa13.17□□□□□ -0.3
TMEM88B-201ENST00000378821 H3BNG1 76 aa13.16□□□□□ -0.3
TMEM88B-201ENST00000378821 NUDT3O95989 172 aa13.16□□□□□ -0.3
TMEM88B-201ENST00000378821 GCGP01275 180 aa13.16□□□□□ -0.3
TMEM88B-201ENST00000378821 MED14OSP0DP75 135 aa13.16□□□□□ -0.3
TMEM88B-201ENST00000378821 NKX2-5P52952 324 aaPredicted RBP13.16□□□□□ -0.3
TMEM88B-201ENST00000378821 CCL18P55774 89 aa13.16□□□□□ -0.3
TMEM88B-201ENST00000378821 ZNF415Q09FC8 603 aa13.16□□□□□ -0.3
TMEM88B-201ENST00000378821 TMEM183BQ1AE95 376 aa13.16□□□□□ -0.3
TMEM88B-201ENST00000378821 FAM159AQ6UWV7 190 aa13.16□□□□□ -0.3
TMEM88B-201ENST00000378821 TMEM183AQ8IXX5 376 aa13.16□□□□□ -0.3
TMEM88B-201ENST00000378821 C18orf15Q96N68 181 aa13.16□□□□□ -0.3
TMEM88B-201ENST00000378821 LINC00588Q9Y4M8 146 aa13.16□□□□□ -0.3
TMEM88B-201ENST00000378821 TRGV1A0A0A0MS02 117 aa13.15□□□□□ -0.3
TMEM88B-201ENST00000378821 NBDYA0A0U1RRE5 68 aa13.15□□□□□ -0.3
TMEM88B-201ENST00000378821 SPINK4O60575 86 aa13.15□□□□□ -0.3
TMEM88B-201ENST00000378821 HOXA5P20719 270 aa13.15□□□□□ -0.3
TMEM88B-201ENST00000378821 PPT1P50897 306 aa13.15□□□□□ -0.3
TMEM88B-201ENST00000378821 TDRG1Q3Y452 100 aa13.15□□□□□ -0.3
TMEM88B-201ENST00000378821 SMUG1Q53HV7 270 aa13.15□□□□□ -0.3
TMEM88B-201ENST00000378821 TCEAL7Q9BRU2 100 aa13.15□□□□□ -0.3
TMEM88B-201ENST00000378821 MDFICQ9P1T7 246 aa13.15□□□□□ -0.3
TMEM88B-201ENST00000378821 TRGV11A0A075B6L2 103 aa13.14□□□□□ -0.31
TMEM88B-201ENST00000378821 CCL20P78556 96 aa13.14□□□□□ -0.31
TMEM88B-201ENST00000378821 SAPCD1Q5SSQ6 148 aa13.14□□□□□ -0.31
TMEM88B-201ENST00000378821 MRPL16Q9NX20 251 aaKnown RBP13.14□□□□□ -0.31
TMEM88B-201ENST00000378821 C11orf21Q9P2W6 132 aa13.14□□□□□ -0.31
TMEM88B-201ENST00000378821 TRAV1-1A0A0B4J248 108 aa13.13□□□□□ -0.31
TMEM88B-201ENST00000378821 TYMSP04818 313 aa13.13□□□□□ -0.31
TMEM88B-201ENST00000378821 TRAV26-1A0A087WT03 109 aa13.12□□□□□ -0.31
TMEM88B-201ENST00000378821 IGHV3-16A0A0C4DH30 117 aa13.12□□□□□ -0.31
TMEM88B-201ENST00000378821 SCO2A0A1W2PP80 73 aa13.12□□□□□ -0.31
TMEM88B-201ENST00000378821 GNRH2O43555 120 aa13.12□□□□□ -0.31
TMEM88B-201ENST00000378821 PFN1P07737 140 aaKnown RBP13.12□□□□□ -0.31
TMEM88B-201ENST00000378821 AKR1C3P42330 323 aa13.12□□□□□ -0.31
TMEM88B-201ENST00000378821 FMC1Q96HJ9 113 aa13.12□□□□□ -0.31
TMEM88B-201ENST00000378821 SDF2L1Q9HCN8 221 aa13.12□□□□□ -0.31
TMEM88B-201ENST00000378821 GNG13Q9P2W3 67 aa13.12□□□□□ -0.31
TMEM88B-201ENST00000378821 TRGV2A0A075B6R0 118 aa13.11□□□□□ -0.31
TMEM88B-201ENST00000378821 UBE2G1P62253 170 aa13.11□□□□□ -0.31
TMEM88B-201ENST00000378821 OR5I1Q13606 314 aa13.11□□□□□ -0.31
TMEM88B-201ENST00000378821 MANBALQ9NQG1 85 aa13.11□□□□□ -0.31
TMEM88B-201ENST00000378821 DYNC1H1Q14204 4646 aaKnown RBP13.11□□□□□ -0.31
TMEM88B-201ENST00000378821 TRBV6-1A0A0K0K1D8 114 aa13.1□□□□□ -0.31
TMEM88B-201ENST00000378821 ZC2HC1AQ96GY0 325 aa13.1□□□□□ -0.31
TMEM88B-201ENST00000378821 KCNS1Q96KK3 526 aa13.1□□□□□ -0.31
TMEM88B-201ENST00000378821 UPK3BQ9BT76 320 aa13.1□□□□□ -0.31
TMEM88B-201ENST00000378821 BOLA1Q9Y3E2 137 aa13.1□□□□□ -0.31
TMEM88B-201ENST00000378821 DNAH11Q96DT5 4516 aa13.1□□□□□ -0.31
TMEM88B-201ENST00000378821 TEX46H3BTG2 121 aa13.09□□□□□ -0.31
TMEM88B-201ENST00000378821 ALKAL2Q6UX46 152 aa13.09□□□□□ -0.31
TMEM88B-201ENST00000378821 C6orf223Q8N319 242 aa13.09□□□□□ -0.31
TMEM88B-201ENST00000378821 SPXQ9BT56 116 aa13.09□□□□□ -0.31
TMEM88B-201ENST00000378821 Q9H8V8 135 aa13.09□□□□□ -0.31
TMEM88B-201ENST00000378821 ZFP30Q9Y2G7 519 aa13.09□□□□□ -0.31
TMEM88B-201ENST00000378821 PCLOQ9Y6V0 5065 aa13.08□□□□□ -0.31
TMEM88B-201ENST00000378821 LTAP01374 205 aa13.08□□□□□ -0.32
TMEM88B-201ENST00000378821 ESRGQ1W209 222 aa13.08□□□□□ -0.32
TMEM88B-201ENST00000378821 COX8CQ7Z4L0 72 aa13.08□□□□□ -0.32
TMEM88B-201ENST00000378821 VSIG2Q96IQ7 327 aa13.08□□□□□ -0.32
TMEM88B-201ENST00000378821 A0A0J9YY99 117 aa13.07□□□□□ -0.32
TMEM88B-201ENST00000378821 CRIP1P50238 77 aa13.07□□□□□ -0.32
TMEM88B-201ENST00000378821 TNP2Q05952 138 aa13.07□□□□□ -0.32
TMEM88B-201ENST00000378821 IGKV3D-20A0A0C4DH25 116 aa13.06□□□□□ -0.32
TMEM88B-201ENST00000378821 FABP5P3A8MUU1 101 aa13.06□□□□□ -0.32
TMEM88B-201ENST00000378821 IGHV3-53P01767 116 aa13.06□□□□□ -0.32
TMEM88B-201ENST00000378821 NHLRC2Q8NBF2 726 aa13.06□□□□□ -0.32
TMEM88B-201ENST00000378821 RASL10AQ92737 203 aa13.06□□□□□ -0.32
TMEM88B-201ENST00000378821 MRPS16Q9Y3D3 137 aaKnown RBP13.06□□□□□ -0.32
TMEM88B-201ENST00000378821 M0R2P5 195 aa13.05□□□□□ -0.32
TMEM88B-201ENST00000378821 SH2D1AO60880 128 aa13.05□□□□□ -0.32
TMEM88B-201ENST00000378821 S100A9P06702 114 aaKnown RBP13.05□□□□□ -0.32
TMEM88B-201ENST00000378821 C11orf52Q96A22 123 aa13.05□□□□□ -0.32
TMEM88B-201ENST00000378821 A0A096LPF7 62 aa13.04□□□□□ -0.32
TMEM88B-201ENST00000378821 A0A1W2PPQ1 181 aa13.04□□□□□ -0.32
TMEM88B-201ENST00000378821 IFNA1P01562 189 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms