RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 IGKV1-17P01599 117 aa5.09□□□□□ -1.59
CDKAL1-202ENST00000378610 CECR9P0C854 216 aa5.09□□□□□ -1.59
CDKAL1-202ENST00000378610 ZNF883P0CG24 379 aa5.09□□□□□ -1.59
CDKAL1-202ENST00000378610 P0DMU3 169 aa5.09□□□□□ -1.59
CDKAL1-202ENST00000378610 FAM231AP0DMU4 169 aa5.09□□□□□ -1.59
CDKAL1-202ENST00000378610 FAM231CP0DMU5 169 aa5.09□□□□□ -1.59
CDKAL1-202ENST00000378610 ZNRD1Q9P1U0 126 aa5.09□□□□□ -1.59
CDKAL1-202ENST00000378610 A8MWV9 139 aa5.09□□□□□ -1.59
CDKAL1-202ENST00000378610 IGLV1-40P01703 118 aa5.09□□□□□ -1.59
CDKAL1-202ENST00000378610 ZNF80P51504 273 aaPredicted RBP5.09□□□□□ -1.59
CDKAL1-202ENST00000378610 LAGE3Q14657 143 aa5.09□□□□□ -1.59
CDKAL1-202ENST00000378610 SMIM20Q8N5G0 67 aa5.09□□□□□ -1.59
CDKAL1-202ENST00000378610 TOMM6Q96B49 74 aa5.09□□□□□ -1.59
CDKAL1-202ENST00000378610 HES7Q9BYE0 225 aa5.09□□□□□ -1.59
CDKAL1-202ENST00000378610 SPRR3Q9UBC9 169 aa5.09□□□□□ -1.59
CDKAL1-202ENST00000378610 MYO9BQ13459 2157 aa5.09□□□□□ -1.6
CDKAL1-202ENST00000378610 KNTC1P50748 2209 aa5.09□□□□□ -1.6
CDKAL1-202ENST00000378610 IGLV3-9A0A075B6K5 115 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 IGHV1-18A0A0C4DH31 117 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 TRBV7-7A0A0K0K1E9 115 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 IGHV3-48P01763 117 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 IGHV3-30P01768 117 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 PRSS1P07477 247 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 IGHV3-30-5P0DP03 117 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 AMELXQ99217 191 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 RASL11BQ9BPW5 248 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 TPSG1Q9NRR2 321 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 FAM240AA0A1B0GVK7 77 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 CFC1BP0CG36 223 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 CFC1P0CG37 223 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 CCL4P13236 92 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 PRTN3P24158 256 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 PSMB2P49721 201 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 HILS1P60008 231 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 TMEM78Q5T7P6 136 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 C11orf45Q8TAV5 145 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 Q96MF0 132 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 M0R2P5 195 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 DLX6P56179 175 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 ERCC8Q13216 396 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 PPP1R27Q86WC6 154 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 C10orf126Q8N4M7 172 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 ZNF491Q8N8L2 437 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 MSRB1Q9NZV6 116 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 CTSZQ9UBR2 303 aa5.08□□□□□ -1.6
CDKAL1-202ENST00000378610 EYSQ5T1H1 3165 aa5.07□□□□□ -1.6
CDKAL1-202ENST00000378610 A0A0J9YY99 117 aa5.07□□□□□ -1.6
CDKAL1-202ENST00000378610 HES3Q5TGS1 186 aa5.07□□□□□ -1.6
CDKAL1-202ENST00000378610 OR10J6PQ8NGY7 276 aa5.07□□□□□ -1.6
CDKAL1-202ENST00000378610 PLEKHB2Q96CS7 222 aa5.07□□□□□ -1.6
CDKAL1-202ENST00000378610 SDK2Q58EX2 2172 aa5.07□□□□□ -1.6
CDKAL1-202ENST00000378610 NAV3Q8IVL0 2385 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 IGHV7-4-1A0A0J9YVY3 117 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 ZFP36P26651 326 aaKnown RBP5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 EBI3Q14213 229 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 PLGLAQ15195 96 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 SDIM1Q6ZPB5 146 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 POM121L12Q8N7R1 296 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 MAP6D1Q9H9H5 199 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 FRYLO94915 3013 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 TINCRA0A1B0GVN0 87 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 RBAKDNA6NC62 111 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 K7EIM0 57 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 SPRY3O43610 288 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 LYZL6O75951 148 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 FAM201AQ5SY85 155 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 SLC25A29Q8N8R3 303 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 IGFBPL1Q8WX77 278 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 CACNA1DQ01668 2161 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 TRIOO75962 3097 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 SLC25A20O43772 301 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 CRYGDP07320 174 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 RNASE1P07998 156 aaKnown RBP5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 HLA-DMBP28068 263 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 VMA21Q3ZAQ7 101 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 OVOL2Q9BRP0 275 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 Q9UF83 564 aa5.06□□□□□ -1.6
CDKAL1-202ENST00000378610 IGLV4-69A0A075B6H9 119 aa5.05□□□□□ -1.6
CDKAL1-202ENST00000378610 A0A0B4J2C4 111 aa5.05□□□□□ -1.6
CDKAL1-202ENST00000378610 M0R3E3 92 aa5.05□□□□□ -1.6
CDKAL1-202ENST00000378610 SNCGO76070 127 aa5.05□□□□□ -1.6
CDKAL1-202ENST00000378610 LYZP61626 148 aa5.05□□□□□ -1.6
CDKAL1-202ENST00000378610 TMEM263Q8WUH6 116 aaKnown RBP5.05□□□□□ -1.6
CDKAL1-202ENST00000378610 PRADC1Q9BSG0 188 aa5.05□□□□□ -1.6
CDKAL1-202ENST00000378610 SPANXDQ9BXN6 97 aa5.05□□□□□ -1.6
CDKAL1-202ENST00000378610 DMDP11532 3685 aa5.05□□□□□ -1.6
CDKAL1-202ENST00000378610 Q6ZQT7 251 aa5.05□□□□□ -1.6
CDKAL1-202ENST00000378610 DNAJC30Q96LL9 226 aa5.05□□□□□ -1.6
CDKAL1-202ENST00000378610 RNF7Q9UBF6 113 aa5.05□□□□□ -1.6
CDKAL1-202ENST00000378610 SLC25A15Q9Y619 301 aa5.05□□□□□ -1.6
CDKAL1-202ENST00000378610 VPS13AQ96RL7 3174 aa5.04□□□□□ -1.6
CDKAL1-202ENST00000378610 SMIM9A6NGZ8 99 aa5.04□□□□□ -1.6
CDKAL1-202ENST00000378610 LGALS9O00182 355 aa5.04□□□□□ -1.6
CDKAL1-202ENST00000378610 NDUFA3O95167 84 aa5.04□□□□□ -1.6
CDKAL1-202ENST00000378610 SCGB1C2P0DMR2 95 aa5.04□□□□□ -1.6
CDKAL1-202ENST00000378610 PI4KAP42356 2102 aa5.04□□□□□ -1.6
CDKAL1-202ENST00000378610 RPL27AP46776 148 aaKnown RBP5.04□□□□□ -1.6
CDKAL1-202ENST00000378610 CRIP2P52943 208 aaPredicted RBP5.04□□□□□ -1.6
CDKAL1-202ENST00000378610 HCP5Q6MZN7 132 aa5.04□□□□□ -1.6
CDKAL1-202ENST00000378610 PPDPFQ9H3Y8 114 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms